-
1
-
-
67749124074
-
-
López et al. ()
-
López et al. (2009), Protein Sci. 18, 1637
-
(2009)
Protein Sci.
, vol.18
, pp. 1637
-
-
-
2
-
-
0020170342
-
Conformational substates in a protein: Structure and dynamics of metmyoglobin at 80K
-
Hartmann, H., Parak, F., Steigemann, W., Petsko, G. A., Ponzi, D. R., and Frauenfelder, H. (1982) Conformational substates in a protein: Structure and dynamics of metmyoglobin at 80K Proc. Natl. Acad. Sci. U.S.A. 79, 4967-4971
-
(1982)
Proc. Natl. Acad. Sci. U.S.A.
, vol.79
, pp. 4967-4971
-
-
Hartmann, H.1
Parak, F.2
Steigemann, W.3
Petsko, G.A.4
Ponzi, D.R.5
Frauenfelder, H.6
-
3
-
-
0026320866
-
The energy landscapes and motions on proteins
-
Frauenfelder, H., Sligar, S. G., and Wolynes., P. G. (1991) The energy landscapes and motions on proteins Science 254, 1598-1603
-
(1991)
Science
, vol.254
, pp. 1598-1603
-
-
Frauenfelder, H.1
Sligar, S.G.2
Wolynes, P.G.3
-
4
-
-
37249032102
-
Dynamic personalities of proteins
-
DOI 10.1038/nature06522, PII NATURE06522
-
Henzler-Wildman, K. and Kern, D. (2007) Dynamic personalities of proteins Nature 450, 964-972 (Pubitemid 350273626)
-
(2007)
Nature
, vol.450
, Issue.7172
, pp. 964-972
-
-
Henzler-Wildman, K.1
Kern, D.2
-
5
-
-
17044452563
-
Dancing with multiple partners
-
Woodside, D. G. (2002) Dancing with multiple partners Sci. STKE 2002, pe14
-
(2002)
Sci. STKE
, vol.2002
, pp. 14
-
-
Woodside, D.G.1
-
6
-
-
45849131354
-
Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution
-
DOI 10.1126/science.1157092
-
Lange, O. F., Lakomek, N., Farès, C., Schröder, G. F., Walter, K. F. A., Becker, S., Meiler, J., Grubümller, H., Griesinger, C., and de Groot, B. L. (2008) Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution Science 320, 1471-1475 (Pubitemid 351929422)
-
(2008)
Science
, vol.320
, Issue.5882
, pp. 1471-1475
-
-
Lange, O.F.1
Lakomek, N.-A.2
Fares, C.3
Schroder, G.F.4
Walter, K.F.A.5
Becker, S.6
Meiler, J.7
Grubmuller, H.8
Griesinger, C.9
De Groot, B.L.10
-
7
-
-
0036147568
-
Multiple diverse ligands binding at a single protein site: A matter of pre-existing populations
-
DOI 10.1110/ps.21302
-
Ma, B., Shatsky, M., Wolfson, H. J., and Nussinov, R. (2002) Multiple diverse ligand binding at a single protein site: a matter of pre-existing populations Protein Sci. 11, 184-197 (Pubitemid 34075781)
-
(2002)
Protein Science
, vol.11
, Issue.2
, pp. 184-197
-
-
Ma, B.1
Shatsky, M.2
Wolfson, H.J.3
Nussinov, R.4
-
8
-
-
0033970020
-
Folding and binding cascades: Dynamic landscapes and population shifts
-
Kumar, S., Ma, B., Tsai, C. J., Sinha, N., and Nussinov, R. (2000) Folding and binding cascades: Dynamic landscapes and population shifts Protein Sci. 9, 10-19 (Pubitemid 30070934)
-
(2000)
Protein Science
, vol.9
, Issue.1
, pp. 10-19
-
-
Kumar, S.1
Ma, B.2
Tsai, C.-J.3
Sinha, N.4
Nussinov, R.5
-
9
-
-
70350340728
-
The role of dynamic conformational ensembles in biomolecular recognition
-
Boehr, D. D., Nussinov, R., and Wright, P. E. (2009) The role of dynamic conformational ensembles in biomolecular recognition Nat. Chem. Biol. 5, 789-796
-
(2009)
Nat. Chem. Biol.
, vol.5
, pp. 789-796
-
-
Boehr, D.D.1
Nussinov, R.2
Wright, P.E.3
-
11
-
-
33748619206
-
An NMR perspective on enzyme dynamics
-
DOI 10.1021/cr050312q
-
Boehr, D. D., Dyson, J. H., and Wright, P. E. (2006) An NMR perspective on enzyme dynamics Chem. Rev. 106, 3055-3079 (Pubitemid 44376926)
-
(2006)
Chemical Reviews
, vol.106
, Issue.8
, pp. 3055-3079
-
-
Boehr, D.D.1
Dyson, H.J.2
Wright, P.E.3
-
12
-
-
33645834303
-
New tools provide new insights in NMR studies of protein dynamics
-
Mittermaier, A and Kay., L. E. (2006) New tools provide new insights in NMR studies of protein dynamics Science 312, 224-228
-
(2006)
Science
, vol.312
, pp. 224-228
-
-
Mittermaier, A.1
Kay, L.E.2
-
13
-
-
0041154173
-
Motion of spin-labeled side chains in T4 lysozyme. Effect of side chain structure
-
Mchaourab, H. S., Kálai, T., Hideg, K., and Hubbell, W. L. (1999) Motion of spin-labeled side chains in T4 lysozyme. Effect of side chain structure Biochemistry 38, 2947-2955
-
(1999)
Biochemistry
, vol.38
, pp. 2947-2955
-
-
McHaourab, H.S.1
Kálai, T.2
Hideg, K.3
Hubbell, W.L.4
-
14
-
-
0035799354
-
Molecular motion of spin labeled side chains in α-helices: Analysis by variation of side chain structure
-
DOI 10.1021/bi002645h
-
Columbus, L., Kálai, T., Jeko, J., Hideg, K., and Hubbell, W. L. (2001) Molecular motion of spin-labeled side chains in alpha-helices:analysis by variation of side chain structure Biochemistry 40, 3828-3846 (Pubitemid 32280420)
-
(2001)
Biochemistry
, vol.40
, Issue.13
, pp. 3828-3846
-
-
Columbus, L.1
Kalai, T.2
Jeko, J.3
Hideg, K.4
Hubbell, W.L.5
-
15
-
-
65649117362
-
Structural origins of weakly ordered motion in spin-labeled proteins
-
Fleissner, M. R., Cascio, D., and Hubbell, W. L. (2009) Structural origins of weakly ordered motion in spin-labeled proteins Protein Sci. 18, 893-908
-
(2009)
Protein Sci.
, vol.18
, pp. 893-908
-
-
Fleissner, M.R.1
Cascio, D.2
Hubbell, W.L.3
-
16
-
-
80053650255
-
Structure and dynamics of a conformationally constrained nitroxide side chain and applications in EPR spectroscopy
-
Fleissner, M. R., Bridges, M. D., Brooks, E. K., Cascio, D., Kálai, T., Hideg, K., and Hubbell, W. L. (2011) Structure and dynamics of a conformationally constrained nitroxide side chain and applications in EPR spectroscopy Proc. Natl. Acad. Sci. U.S.A. 108, 16241-16246
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 16241-16246
-
-
Fleissner, M.R.1
Bridges, M.D.2
Brooks, E.K.3
Cascio, D.4
Kálai, T.5
Hideg, K.6
Hubbell, W.L.7
-
17
-
-
0036606899
-
A new spin on protein dynamics
-
DOI 10.1016/S0968-0004(02)02095-9, PII S0968000402020959
-
Columbus, L and Hubbell, W. L. (2002) A new spin on protein dynamics TiBS 27, 288-295 (Pubitemid 34628668)
-
(2002)
Trends in Biochemical Sciences
, vol.27
, Issue.6
, pp. 288-295
-
-
Columbus, L.1
Hubbell, W.L.2
-
18
-
-
2942527068
-
Mapping backbone dynamics in solution with site-directed spin labeling: GCN4-58 bZip free and bound to DNA
-
DOI 10.1021/bi0497906
-
Columbus, L. and Hubbell, W. L. (2004) Mapping backbone dynamics in solution with site-directed spin labeling: GCN4-58 bZip free and bound to DNA Biochemistry 43, 7273-7287 (Pubitemid 38745748)
-
(2004)
Biochemistry
, vol.43
, Issue.23
, pp. 7273-7287
-
-
Columbus, L.1
Hubbell, W.L.2
-
19
-
-
67749091066
-
Multifrequency electron spin resonance of a spin-labeled protein calculated from molecular dynamics simulations
-
Sezer, D., Freed, J. H., and Roux, B. (2009) Multifrequency electron spin resonance of a spin-labeled protein calculated from molecular dynamics simulations J. Am. Chem. Soc. 131, 2597-2605
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 2597-2605
-
-
Sezer, D.1
Freed, J.H.2
Roux, B.3
-
20
-
-
67749124074
-
Osmolyte perturbation reveals conformational equilibria in spin-labeled proteins
-
López, C. J., Fleissner, M. R., Guo, Z., Kusnetzow, A. K., and Hubbell, W. L. (2009) Osmolyte perturbation reveals conformational equilibria in spin-labeled proteins Protein Sci. 18, 1637-1652
-
(2009)
Protein Sci.
, vol.18
, pp. 1637-1652
-
-
López, C.J.1
Fleissner, M.R.2
Guo, Z.3
Kusnetzow, A.K.4
Hubbell, W.L.5
-
21
-
-
71149088976
-
Resolving conformational and rotameric exchange in spin-labeled proteins using saturation recovery EPR
-
Bridges, M. D., Hideg, K., and Hubbell, W. L. (2010) Resolving conformational and rotameric exchange in spin-labeled proteins using saturation recovery EPR Appl. Magn. Reson. 37, 363-390
-
(2010)
Appl. Magn. Reson.
, vol.37
, pp. 363-390
-
-
Bridges, M.D.1
Hideg, K.2
Hubbell, W.L.3
-
22
-
-
79952144525
-
High-pressure EPR reveals conformational equilibria and volumetric properties in spin-labeled proteins
-
McCoy, J. and Hubbell, W. L. (2011) High-pressure EPR reveals conformational equilibria and volumetric properties in spin-labeled proteins Proc. Natl. Acad. Sci. U.S.A. 108, 1331-1336
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 1331-1336
-
-
McCoy, J.1
Hubbell, W.L.2
-
23
-
-
34249794011
-
Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme
-
DOI 10.1110/ps.062739107
-
Guo, Z., Cascio, D., Hideg, K., Kálai, T., and Hubbell, W. L. (2007) Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme Protein Sci. 16, 1069-1086 (Pubitemid 46849217)
-
(2007)
Protein Science
, vol.16
, Issue.6
, pp. 1069-1086
-
-
Guo, Z.1
Cascio, D.2
Hideg, K.3
Kalai, T.4
Hubbell, W.L.5
-
24
-
-
38649125853
-
Structural determinants of nitroxide motion in spin-labeled proteins: Solvent-exposed sites in helix B of T4 lysozyme
-
DOI 10.1110/ps.073174008
-
Guo, Z., Casio, D., Hideg, K., and Hubbell, W. L. (2008) Structural determinants of nitroxide motion in spin-labeled proteins: Solvent-exposed sites in helix B of T4 lysozyme Protein Sci. 17, 228-239 (Pubitemid 351171835)
-
(2008)
Protein Science
, vol.17
, Issue.2
, pp. 228-239
-
-
Guo, Z.1
Cascio, D.2
Hideg, K.3
Hubbell, W.L.4
-
25
-
-
79959326174
-
Measurements of protein unfolding/refolding kinetics and structural characterization of hidden intermediates by NMR relaxation dispersion
-
Meinhold, D. and Wright, P. E. (2011) Measurements of protein unfolding/refolding kinetics and structural characterization of hidden intermediates by NMR relaxation dispersion Proc. Natl. Acad. Sci. U.S.A. 108, 9078-9083
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 9078-9083
-
-
Meinhold, D.1
Wright, P.E.2
-
26
-
-
0029795404
-
High resolution crystal structures of the deoxy, oxy, and aquomet forms of cobalt myoglobin
-
DOI 10.1074/jbc.271.41.25419
-
Brucker, E. A., Olson, J. S., Phillips, G. N., Jr., Dou, Y., and Ikeda-Saito, M. (1996) High resolution crystal structures of the deoxy, oxy, and aquomet forms of cobalt myoglobin J. Biol. Chem. 271, 25419-25422 (Pubitemid 26337914)
-
(1996)
Journal of Biological Chemistry
, vol.271
, Issue.41
, pp. 25419-25422
-
-
Brucker, E.A.1
Olson, J.S.2
Phillips Jr., G.N.3
Dou, Y.4
Ikeda-Saito, M.5
-
27
-
-
0038853525
-
Crystal structures of myoglobin-ligand complexes at near-atomic resolution
-
Vojtechovsky, J., Chu, K., Berendzen, J., Sweet, R. M., and Schlichting, I. (1999) Crystal structures of myoglobin-ligand complexes at near-atomic resolution Biophys. J. 77, 2153-2174 (Pubitemid 29463176)
-
(1999)
Biophysical Journal
, vol.77
, Issue.4
, pp. 2153-2174
-
-
Vojtechovsky, J.1
Chu, K.2
Berendzen, J.3
Sweet, R.M.4
Schlichting, I.5
-
28
-
-
0028127028
-
Solution structure of carbonmonoxy myoglobin determined from nuclear magnetic resonance distance and chemical shift constraints
-
DOI 10.1006/jmbi.1994.1718
-
Ösapay, K., Theriault, Y., Wright, P. E., and Case, D. E. (1994) Solution structure of carbomonoxy myoglobin determined from nuclear magnetic resonance distance and chemical shifts constraints J. Mol. Biol. 244, 183-197 (Pubitemid 24366037)
-
(1994)
Journal of Molecular Biology
, vol.244
, Issue.2
, pp. 183-197
-
-
Osapay, K.1
Theriault, Y.2
Wright, P.E.3
Case, D.A.4
-
29
-
-
0030575785
-
Is apomyoglobin a molten globule? Structural characterization by NMR
-
DOI 10.1006/jmbi.1996.0596
-
Eliezer, D. and Wright, P. (1996) Is apomyoglobin a molten globule? Structural characterization by NMR J. Mol. Biol. 263, 531-538 (Pubitemid 26382073)
-
(1996)
Journal of Molecular Biology
, vol.263
, Issue.4
, pp. 531-538
-
-
Eliezer, D.1
Wright, P.E.2
-
30
-
-
0031932824
-
Structural and dynamic characterization of partially folded states of apomyoglobin and implications for protein folding
-
Eliezer, D., Yao, Y., Dyson, H. J., and Wright, P. (1998) Structural and dynamic characterization of partially folded states of apomyoglobin and implications for protein folding Nature Struct. Biol. 5, 148-155 (Pubitemid 28086916)
-
(1998)
Nature Structural Biology
, vol.5
, Issue.2
, pp. 148-155
-
-
Eliezer, D.1
Yao, J.2
Jane Dyson, H.3
Wright, P.E.4
-
31
-
-
0030056766
-
The native state of apomyoglobin described by proton NMR spectroscopy: The A-B-G-H interface of wild-type sperm whale apomyoglobin
-
DOI 10.1002/(SICI)1097-0134(199 607)25:3<267::AID-PROT1>3. 0.CO;2-D
-
Lecomte, J. T. J., Kao, Y. H., and Cocco, M. J. (1996) The native state of apomyoglobin described by proton NMR spectroscopy: The A-B-G-H interface of wild-type sperm whale apomyoglobin Proteins 25, 267-285 (Pubitemid 26257188)
-
(1996)
Proteins: Structure, Function and Genetics
, vol.25
, Issue.3
, pp. 267-285
-
-
Lecomte, J.T.J.1
Kao, Y.-H.2
Cocco, M.J.3
-
33
-
-
0034696675
-
Native and non-native secondary structure and dynamics in the pH 4 intermediate of apomyoglobin
-
DOI 10.1021/bi992545f
-
Eliezer, D., Chung, J., Dyson, J. H., and Wright, P. E. (2000) Native and non-native secondary structure and dynamics in the pH 4 intermediate of apomyoglobin Biochemistry 39, 2894-2901 (Pubitemid 30159394)
-
(2000)
Biochemistry
, vol.39
, Issue.11
, pp. 2894-2901
-
-
Eliezer, D.1
Chung, J.2
Dyson, H.J.3
Wright, P.E.4
-
34
-
-
0035957221
-
NMR structural and dynamic characterization of the acid-unfolded state of apomyoglobin provides insights into the early events in protein folding
-
DOI 10.1021/bi002776i
-
Yao, J., Chung, J., Eliezer, D., Wright, P. E., and Dyson, J. H. (2001) NMR structural and dynamic characterization of the acid-unfolded state of apomyoglobin provides insights into the early events in protein folding Biochemistry 40, 3561-3571 (Pubitemid 32242813)
-
(2001)
Biochemistry
, vol.40
, Issue.12
, pp. 3561-3571
-
-
Yao, J.1
Chung, J.2
Eliezer, D.3
Wright, P.E.4
Dyson, H.J.5
-
35
-
-
0036389787
-
Mapping long-range contacts in a highly unfolded protein
-
Lietzow, M. A., Jamin, M., Dyson., J. H., and Wright, P. E. (2002) Mapping long-range contacts in a highly unfolded protein J. Mol. Biol. 322, 655-662
-
(2002)
J. Mol. Biol.
, vol.322
, pp. 655-662
-
-
Lietzow, M.A.1
Jamin, M.2
Dyson, J.H.3
Wright, P.E.4
-
36
-
-
0023759595
-
Thermodynamic study of the apomyoglobin structure
-
Griko, Y. V., Privalov, P. L., Venyaminov, S. Y., and Kutyshenko, V. P. (1988) Thermodynamic study of the apomyoglobin structure J. Mol. Biol. 202, 127-138
-
(1988)
J. Mol. Biol.
, vol.202
, pp. 127-138
-
-
Griko, Y.V.1
Privalov, P.L.2
Venyaminov, S.Y.3
Kutyshenko, V.P.4
-
37
-
-
0028884580
-
The radius of gyration of an apomyoglobin folding intermediate
-
Eliezer, D., Jennigs, P. A., Wright, P. E., Doniash, S., Hodgson, K. O., and Tsuruta, H. (1995) The radius of gyration of an apomyoglobin folding intermediate Science 270, 548-488
-
(1995)
Science
, vol.270
, pp. 548-488
-
-
Eliezer, D.1
Jennigs, P.A.2
Wright, P.E.3
Doniash, S.4
Hodgson, K.O.5
Tsuruta, H.6
-
38
-
-
0029930590
-
Conformational heterogeneity and stability of apomyoglobin studied by hydrogen/deuterium exchange and electrospray ionization mass spectrometry
-
DOI 10.1021/bi9521304
-
Wang, F. and Tang., X. (1996) Conformational heterogeneity and stability of apomyoglobin studies by hydrogen/deuterium exchange and electrospray ionization mass spectrometry Biochemistry 35, 4069-4078 (Pubitemid 26113463)
-
(1996)
Biochemistry
, vol.35
, Issue.13
, pp. 4069-4078
-
-
Wang, F.1
Tang, X.-J.2
-
40
-
-
0023462496
-
High-level expression of sperm whale myoglobin in Escherichia coli
-
Springer, B. and Sligar, S. G. (1987) High-level expression of sperm whale myoglobin in Escherichia coli Proc. Natl. Acad. Sci. U.S.A. 84, 8961-8965
-
(1987)
Proc. Natl. Acad. Sci. U.S.A.
, vol.84
, pp. 8961-8965
-
-
Springer, B.1
Sligar, S.G.2
-
41
-
-
44949236117
-
High-resolution distance mapping in rhodopsin reveals the pattern of helix movement due to activation
-
DOI 10.1073/pnas.0802515105
-
Altenbach, C., Kusnetzow, A. K., Ernst, O. P., Hofmann, K. P., and Hubbell, W. L. (2008) High-resolution distance mapping in rhodopsin reveals the pattern of helix movement due to activation Proc. Natl. Acad. Sci. U.S.A. 105, 7439-7444 (Pubitemid 351830036)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.21
, pp. 7439-7444
-
-
Altenbach, C.1
Kusnetzow, A.K.2
Ernst, O.P.3
Hofmann, K.P.4
Hubbell, W.L.5
-
42
-
-
33846344623
-
DeerAnalysis2006: A comprehensive software package for analyzing pulse ELDOR
-
Jeschke, G. (2006) DeerAnalysis2006: A comprehensive software package for analyzing pulse ELDOR Appl. Magn. Reson. 191, 473-498
-
(2006)
Appl. Magn. Reson.
, vol.191
, pp. 473-498
-
-
Jeschke, G.1
-
43
-
-
0001528720
-
Exact and efficient analytical calculation of the accessible surface areas and their gradients for macromolecules
-
Fraczkiewicz, R. and Braun, W. (1998) Exact and efficient analytical calculation of the accessible surface areas and their gradients for macromolecules J. Comput. Chem. 19, 319-333 (Pubitemid 128592649)
-
(1998)
Journal of Computational Chemistry
, vol.19
, Issue.3
, pp. 319-333
-
-
Fraczkiewicz, R.1
Braun, W.2
-
44
-
-
0039171268
-
Crystal structures of spin labeled T4 lysozyme mutants: Implications for the interpretation of EPR spectra in terms of structure
-
DOI 10.1021/bi000604f
-
Langen, R., Oh, K. J., Cascio, D., and Hubbell, W. L. (2000) Crystal structures of spin labeled T4 lysozyme mutants: Implications for the interpretation of EPR spectra in terms of structure Biochemistry 39, 8396-8405 (Pubitemid 30489936)
-
(2000)
Biochemistry
, vol.39
, Issue.29
, pp. 8396-8405
-
-
Langen, R.1
Oh, K.J.2
Cascio, D.3
Hubbell, W.L.4
-
45
-
-
78649504797
-
Structural origins of nitroxide side chain dynamics on membrane protein α-helical sites
-
Kroncke, B. M., Horanyi, P. S., and Columbus, L. (2010) Structural origins of nitroxide side chain dynamics on membrane protein α-helical sites Biochemistry 49, 10045-10060
-
(2010)
Biochemistry
, vol.49
, pp. 10045-10060
-
-
Kroncke, B.M.1
Horanyi, P.S.2
Columbus, L.3
-
46
-
-
0029737895
-
The association rate constant for heme binding to globin is independent of protein structure
-
DOI 10.1021/bi960371l
-
Hargrove, M. S., Barrick, D., and Olson, J. S. (1996) The association rate constant for heme binding to globin is independent of protein structure Biochemistry 35, 11293-11299 (Pubitemid 26299302)
-
(1996)
Biochemistry
, vol.35
, Issue.35
, pp. 11293-11299
-
-
Hargrove, M.S.1
Barrick, D.2
Olson, J.S.3
-
47
-
-
0029905422
-
Motion of spin-labeled side chains in T4 lysozyme. Correlation with protein structure and dynamics
-
DOI 10.1021/bi960482k
-
Mchaourab, H. S., Lietzow, M. A., Hideg, K., and Hubbell, W. L. (1996) Motion of spin-labeled side chains in T4 lysozyme. Correlation with protein structure and dynamics Biochemistry 35, 7692-7704 (Pubitemid 26202511)
-
(1996)
Biochemistry
, vol.35
, Issue.24
, pp. 7692-7704
-
-
Mchaourab, H.S.1
Lietzow, M.A.2
Hideg, K.3
Hubbell, W.L.4
-
48
-
-
77951596391
-
Multifrequency electron spin resonance study of the dynamics of spin labeled T4 lysozyme
-
Zhang, Z., Fleissner, M. R., Tipikin, D. S., Liang, Z., Moscicki, J. K., Earle, K. A., Hubbell, W. L., and Freed, J. H. (2010) Multifrequency electron spin resonance study of the dynamics of spin labeled T4 lysozyme J. Phys. Chem. B 114, 5503-5521
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 5503-5521
-
-
Zhang, Z.1
Fleissner, M.R.2
Tipikin, D.S.3
Liang, Z.4
Moscicki, J.K.5
Earle, K.A.6
Hubbell, W.L.7
Freed, J.H.8
-
51
-
-
78651466789
-
Conformational analysis of a nitroxide side chain in an α-helix with density functional theory
-
Warshaviak, D. T., Serbulea, L., Houk, K. N., and Hubbell, W. L. (2011) Conformational analysis of a nitroxide side chain in an α-helix with density functional theory J. Phys. Chem. B 115, 397-405
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 397-405
-
-
Warshaviak, D.T.1
Serbulea, L.2
Houk, K.N.3
Hubbell, W.L.4
-
52
-
-
0000326938
-
Nonlinear-least-squares analysis of slow-motion EPR spectra in one and two dimensions using a modified levenberg-marquardt algorithm
-
Budil, D. E., Lee, S., Saxena, S., and Freed, J. H. (1996) Nonlinear-least-squares analysis of slow-motion EPR spectra in one and two dimensions using a modified Levenberg-Marquard algorithm J. Magn. Reson. Ser. A 120, 155-189 (Pubitemid 126751752)
-
(1996)
Journal of Magnetic Resonance - Series A
, vol.120
, Issue.2
, pp. 155-189
-
-
Budil, D.E.1
Sanghyuk, L.2
Saxena, S.3
Freed, J.H.4
-
53
-
-
0022032982
-
The stabilization of proteins by osmolytes
-
Arakawa, T. and Timasheff, S. N. (1985) The stabilization of proteins by osmolytes Biophys. J. 47, 411-414
-
(1985)
Biophys. J.
, vol.47
, pp. 411-414
-
-
Arakawa, T.1
Timasheff, S.N.2
-
54
-
-
0028862864
-
The peptide backbone plays a dominant role in protein stabilization by naturally occurring osmolytes
-
Liu, Y. and Bolen, B. D. (1995) The peptide backbone plays a dominant role in protein stabilization by naturally occurring osmolytes Biochemistry 34, 12884-12891
-
(1995)
Biochemistry
, vol.34
, pp. 12884-12891
-
-
Liu, Y.1
Bolen, B.D.2
-
55
-
-
76749110236
-
Osmolytes modulate conformational exchange in solvent-exposed regions of membrane proteins
-
Flores, R. H., Cao, M. D., Kim, M., and Cafiso, D. S. (2010) Osmolytes modulate conformational exchange in solvent-exposed regions of membrane proteins Protein Sci. 19, 269-278
-
(2010)
Protein Sci.
, vol.19
, pp. 269-278
-
-
Flores, R.H.1
Cao, M.D.2
Kim, M.3
Cafiso, D.S.4
-
56
-
-
0025186451
-
Structural characterization of a partially folded apomyoglobin intermediate
-
Hughson, F. M., Wright, P. E., and Baldwin, R. L. (1990) Structural characterization of a partially folded apomyoglobin intermediate Science 249, 1544-1548
-
(1990)
Science
, vol.249
, pp. 1544-1548
-
-
Hughson, F.M.1
Wright, P.E.2
Baldwin, R.L.3
-
57
-
-
0027749370
-
Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin
-
Jennings, P. A. and Wright, P. E. (1993) Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin Science 262, 892-896 (Pubitemid 24014075)
-
(1993)
Science
, vol.262
, Issue.5135
, pp. 892-896
-
-
Jennings, P.A.1
Wright, P.E.2
-
58
-
-
0036382667
-
The apomyoglobin folding pathway revisited: Structural heterogeneity in the kinetic burst phase intermediate
-
Nishimura, C., Dyson, J. H., and Wright., P. E. (2002) The apomyoglobin folding pathway revisited: Structural heterogeneity in the kinetic burst phase intermediate J. Mol. Biol. 322, 483-489
-
(2002)
J. Mol. Biol.
, vol.322
, pp. 483-489
-
-
Nishimura, C.1
Dyson, J.H.2
Wright, P.E.3
-
59
-
-
79954497065
-
Site-specific hydration dynamics in the nonpolar core of a molten globule by dynamic nuclear polarization of water
-
Armstrong, B. D., Choi, J., López, C., Wesener, D. A., Hubbell, W., Cavagnero, S., and Han, S. (2011) Site-specific hydration dynamics in the nonpolar core of a molten globule by dynamic nuclear polarization of water J. Am. Chem. Soc. 113, 5987-5995
-
(2011)
J. Am. Chem. Soc.
, vol.113
, pp. 5987-5995
-
-
Armstrong, B.D.1
Choi, J.2
López, C.3
Wesener, D.A.4
Hubbell, W.5
Cavagnero, S.6
Han, S.7
-
60
-
-
0030937861
-
Kinetics and motional dynamics of spin-labeled yeast iso-1-cytochrome c: 1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102
-
DOI 10.1021/bi962155i
-
Qu, K. B., Vaughn, J. L., Sienkiewicz, A., Scholes, C. P., and Fetrow, J. S. (1997) Kinetics and motional dynamics of spin-labeled yeast Iso-1-cytochrome c: 1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102 Biochemistry 36, 2884-2897 (Pubitemid 27138572)
-
(1997)
Biochemistry
, vol.36
, Issue.10
, pp. 2884-2897
-
-
Qu, K.1
Vaughn, J.L.2
Sienkiewicz, A.3
Scholes, C.P.4
Fetrow, J.S.5
-
61
-
-
0033594926
-
Structural features of the C-terminal domain of bovine rhodopsin: A site-directed spin-labeling study
-
Langen, R., Cai, K., Altenbach, C., Khorana, H. G., and Hubbell, W. L. (1999) Structural features of the C-terminal domain of bovine rhodopsin: a site-directed spin-labeling study Biochemistry 38, 7918-7924
-
(1999)
Biochemistry
, vol.38
, pp. 7918-7924
-
-
Langen, R.1
Cai, K.2
Altenbach, C.3
Khorana, H.G.4
Hubbell, W.L.5
-
62
-
-
0034132251
-
Dead-time free measurement of dipole-dipole interactions between electron spins
-
Pannier, M., Veit, S., Godt, A., Jeschke., G., and Speiss, H. W. (2000) Dead-time free measurement of dipole-dipole interactions between electron spins J. Magn. Reson. 142, 331-340
-
(2000)
J. Magn. Reson.
, vol.142
, pp. 331-340
-
-
Pannier, M.1
Veit, S.2
Godt, A.3
Jeschke, G.4
Speiss, H.W.5
-
63
-
-
0037112592
-
Distance measurements in the nanometer range by pulse EPR
-
Jeshke, G. (2002) Distance measurements in the nanometer range by pulse EPR ChemPhysChem 3, 927-932
-
(2002)
ChemPhysChem
, vol.3
, pp. 927-932
-
-
Jeshke, G.1
-
64
-
-
34147218123
-
Distance measurements on spin-labeled biomacromolecules by pulsed electron paramagnetic resonance
-
Jeschke, G. and Polyhach, Y. (2007) Distance measurements on spin-labeled biomacromolecules by pulsed electron paramagnetic resonance Phys. Chem. Chem. Phys. 9, 1895-1910
-
(2007)
Phys. Chem. Chem. Phys.
, vol.9
, pp. 1895-1910
-
-
Jeschke, G.1
Polyhach, Y.2
-
65
-
-
0033525126
-
Temperature dependence of intramolecular dynamics of the basic leucine zipper of GCN4: Implications for the entropy of association with DNA
-
DOI 10.1006/jmbi.1998.2429
-
Bracken, C., Carr, P. A., Cavanagh, J., and Palmer, A. G. (1999) Temperature dependence of intramolecular dynamics of the basic leucine zipper of GCN4: implications for the entropy of association with DNA J. Mol. Biol. 285, 2133-2146 (Pubitemid 29078176)
-
(1999)
Journal of Molecular Biology
, vol.285
, Issue.5
, pp. 2133-2146
-
-
Bracken, C.1
Carr, P.A.2
Cavanagh, J.3
Palmer III, A.G.4
-
66
-
-
33751289801
-
Assessing induced folding of an IDP by SDSL EPR spectroscopy
-
Morin, B., Bourhis, J. M., and Longhi, S. (2006) Assessing induced folding of an IDP by SDSL EPR spectroscopy J. Phys. Chem. B 110, 20596-20608
-
(2006)
J. Phys. Chem. B
, vol.110
, pp. 20596-20608
-
-
Morin, B.1
Bourhis, J.M.2
Longhi, S.3
-
67
-
-
58149279796
-
Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy
-
Belle, V., Rouger, S., Costanzo, S., Liquiere, E., Strancar, J., Guigliarelli, B., Fournel, A., and Longhi, S (2008) Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy Proteins 73, 973-988
-
(2008)
Proteins
, vol.73
, pp. 973-988
-
-
Belle, V.1
Rouger, S.2
Costanzo, S.3
Liquiere, E.4
Strancar, J.5
Guigliarelli, B.6
Fournel, A.7
Longhi, S.8
-
68
-
-
43949138917
-
Parametrization, molecular dynamics simulation, and calculation of electron spin resonance spectra of a nitroxide spin label on a polyalanine α-helix
-
DOI 10.1021/jp711375x
-
Sezer, D., Freed, J. H., and Roux, B. (2008) Parametrization, molecular dynamics simulation, and calculation of electron spin resonance spectra of a nitroxide spin label on a polyalanine alpha-helix J. Phys. Chem. B. 112, 5755-5767 (Pubitemid 351704592)
-
(2008)
Journal of Physical Chemistry B
, vol.112
, Issue.18
, pp. 5755-5767
-
-
Sezer, D.1
Freed, J.H.2
Roux, B.3
-
69
-
-
0032991161
-
Analysis of deuterium relaxation-derived methyl axis order parameters and correlation with local structure
-
DOI 10.1023/A:1008387715167
-
Mittermaier, A., Kay, L. E., and Forman-Kay, J. D. (1999) Analysis of deuterium relaxation-derived methyl axis order parameter and correlation with local structure J. Biomol. NMR 13, 181-185 (Pubitemid 29089228)
-
(1999)
Journal of Biomolecular NMR
, vol.13
, Issue.2
, pp. 181-185
-
-
Mittermaier, A.1
Kay, L.E.2
Forman-Kay, J.D.3
-
70
-
-
0034723132
-
Relationship between protein structure and dynamics from a database of NMR-derived backbone order parameters
-
Goodman, J. L., Pagel, M. D., and Stone, M. J. (2000) Relationship between protein structure and dynamics from a database of NMR-derived backbone order parameters J. Mol. Biol. 295, 963-978
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 963-978
-
-
Goodman, J.L.1
Pagel, M.D.2
Stone, M.J.3
-
71
-
-
0037202183
-
Contact model for the prediction of NMR N-H order parameters in globular proteins
-
DOI 10.1021/ja027847a
-
Zhang, F. and Brüshweiler, R. (2002) Contact model for the prediction of NMR N-H order parameter in globular proteins J. Am. Chem. Soc. 124, 12654-12655 (Pubitemid 35215977)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.43
, pp. 12654-12655
-
-
Zhang, F.1
Bruschweiler, R.2
-
72
-
-
53549083216
-
Prediction of NMR order parameters in proteins using weighted protein contact number
-
Huang, S. H., Shih, C. H., Lin, C. P., and Hwang, J. K. (2008) Prediction of NMR order parameters in proteins using weighted protein contact number Theor. Chem. Acc. 121, 197-200
-
(2008)
Theor. Chem. Acc.
, vol.121
, pp. 197-200
-
-
Huang, S.H.1
Shih, C.H.2
Lin, C.P.3
Hwang, J.K.4
-
74
-
-
0025037796
-
Comparison of the dynamics of myoglobin in different crystal forms
-
Phillips, G. N. (1990) Comparison of the dynamics of myoglobin in different crystal forms Biophys. J. 57, 381-383
-
(1990)
Biophys. J.
, vol.57
, pp. 381-383
-
-
Phillips, G.N.1
-
75
-
-
0023652260
-
Thermal expansion of a protein
-
Frauenfelder, H., Hartmann, H., Karplus, M., Kuntz, I. D., Kuriyan, J., Parak, F., Petsko, G. A., Ringe, D., Tilton, R. F., Connolly, M. L., and Max, N. (1987) Thermal expansion of a protein Biochemistry 26, 254-261
-
(1987)
Biochemistry
, vol.26
, pp. 254-261
-
-
Frauenfelder, H.1
Hartmann, H.2
Karplus, M.3
Kuntz, I.D.4
Kuriyan, J.5
Parak, F.6
Petsko, G.A.7
Ringe, D.8
Tilton, R.F.9
Connolly, M.L.10
Max, N.11
-
76
-
-
0029366730
-
Crankshaft motions of the polypeptide backbone in molecular dynamics simulations of human type-α transforming growth factor
-
Fadel, A. R., Jin, D. Q., Montelione, G. T., and Levy, E. M. (1995) Crankshaft motions of the polypeptide backbone in molecular dynamics simulations of human type-α transforming growth factor J. Biomol. NMR. 6, 221-226
-
(1995)
J. Biomol. NMR.
, vol.6
, pp. 221-226
-
-
Fadel, A.R.1
Jin, D.Q.2
Montelione, G.T.3
Levy, E.M.4
-
77
-
-
0019209443
-
Structure and refinement of oxymyoglobin at 1.6 Å resolution
-
DOI 10.1016/0022-2836(80)90262-4
-
Phillips, S. E. V. (1980) Structure and refinement of oxymyoglobin at 1.5Å resolution J. Mol. Biol. 142, 531-554 (Pubitemid 11193948)
-
(1980)
Journal of Molecular Biology
, vol.142
, Issue.4
, pp. 531-554
-
-
Phillips, S.E.V.1
-
78
-
-
0033574735
-
A steric mechanism for inhibition of CO binding to heme proteins
-
DOI 10.1126/science.284.5413.473
-
Kachalova, G. A., Popov, A. N., and Bartunik, H. D. (1999) A steric mechanism for inhibition of CO binding to heme proteins Science 284, 473-476 (Pubitemid 29289617)
-
(1999)
Science
, vol.284
, Issue.5413
, pp. 473-476
-
-
Kachalova, G.S.1
Popov, A.N.2
Bartunik, H.D.3
-
79
-
-
23144432251
-
Van der Waals Forces
-
Cambridge University Press, New York
-
Parsegian, V. A. (2006) Van der Waals Forces, A Handbook for Biologists, Chemists, Engineers, and Physicists, Cambridge University Press, New York.
-
(2006)
A Handbook for Biologists, Chemists, Engineers, and Physicists
-
-
Parsegian, V.A.1
-
80
-
-
27844593258
-
Laser flash photolysis of hydrogen peroxide to oxidize protein solvent-accessible residues on the microsecond timescale
-
DOI 10.1016/j.jasms.2005.09.008, PII S1044030505008159
-
Hambly, D. M. and Gross, M. L. (2005) Laser flash photolysis of hydrogen peroxide to oxidize protein solvent accessible residues on the microsecond timescale J. Am. Soc. Mass. Spectrom. 16, 2057-2063 (Pubitemid 41642969)
-
(2005)
Journal of the American Society for Mass Spectrometry
, vol.16
, Issue.12
, pp. 2057-2063
-
-
Hambly, D.M.1
Gross, M.L.2
-
81
-
-
77955583625
-
Electron paramagnetic resonance studies of functionally active, nitroxide spin-labeled peptide analogues of the C-terminus of a G-protein α subunit
-
Van Eps, N., Anderson, L. L., Kisselev, O. G., Baranski, T. J., Hubbell, W. L., and Marshall, G. R. (2010) Electron paramagnetic resonance studies of functionally active, nitroxide spin-labeled peptide analogues of the C-terminus of a G-protein α subunit Biochemistry 49, 6877-6886
-
(2010)
Biochemistry
, vol.49
, pp. 6877-6886
-
-
Van Eps, N.1
Anderson, L.L.2
Kisselev, O.G.3
Baranski, T.J.4
Hubbell, W.L.5
Marshall, G.R.6
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