The limitations of draft assemblies for understanding prokaryotic adaptation and evolution

Genomics

Volumn 100, Issue 3, 2012, Pages 167-175

  Ricker, N ^a   Qian, H ^a   Fulthorpe, R R ^a  

^a UNIVERSITY OF TORONTO   (Canada)

Author keywords

Cupriavidus metallidurans CH34; De novo assembly; Genomic islands; Next generation sequencing; Transposable elements

Indexed keywords

ARTICLE; BACTERIAL GENOME; BORDETELLA BRONCHISEPTICA; CAULOBACTER; CONTROLLED STUDY; CUPRIAVIDUS METALLIDURANS; EVOLUTIONARY ADAPTATION; GENE SEQUENCE; GENETIC ASSOCIATION; GENOME ANALYSIS; GENOME SIZE; GENOMIC ISLAND; GRAM NEGATIVE BACTERIUM; GRAMELLA FORSETII; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROKARYOTE; REPLICON; RHODOBACTER SPHAEROIDES; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; TRANSPOSON;

ADAPTATION, BIOLOGICAL; BORDETELLA BRONCHISEPTICA; CAULOBACTER; CHROMOSOMES, BACTERIAL; COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; CUPRIAVIDUS; DATABASES, GENETIC; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; EVOLUTION, MOLECULAR; GENOME, BACTERIAL; GENOMIC INSTABILITY; GENOMIC ISLANDS; MOLECULAR SEQUENCE ANNOTATION; PROKARYOTIC CELLS; RHODOBACTER SPHAEROIDES; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); BORDETELLA BRONCHISEPTICA; CAULOBACTER SP.; CUPRIAVIDUS METALLIDURANS; GRAMELLA; PROKARYOTA; RHODOBACTER SPHAEROIDES 2.4.1;

EID: 84865363124     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2012.06.009     Document Type: Article

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