메뉴 건너뛰기




Volumn 9, Issue , 2008, Pages

Genomic islands from five strains of Burkholderia pseudomallei

Author keywords

[No Author keywords available]

Indexed keywords

TRANSFER RNA;

EID: 58149313638     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-566     Document Type: Article
Times cited : (84)

References (36)
  • 1
    • 0038324480 scopus 로고    scopus 로고
    • Melioidosis
    • 10.1016/S0140-6736(03)13374-0 12767750
    • White NJ Melioidosis Lancet 2003, 361(9370):1715-1722. 10.1016/ S0140-6736(03)13374-0 12767750
    • (2003) Lancet , vol.361 , Issue.9370 , pp. 1715-1722
    • White, N.J.1
  • 8
    • 10444230337 scopus 로고    scopus 로고
    • Community-acquired pneumonia in northern Australia: Low mortality in a tropical region using locally-developed treatment guidelines
    • 10.1016/j.ijid.2004.09.008 15603991
    • Elliott JH Anstey NM Jacups SP Fisher DA Currie BJ Community-acquired pneumonia in northern Australia: Low mortality in a tropical region using locally-developed treatment guidelines International Journal of Infectious Diseases 2005, 9(1):15-20. 10.1016/j.ijid.2004.09.008 15603991
    • (2005) International Journal of Infectious Diseases , vol.9 , Issue.1 , pp. 15-20
    • Elliott, J.H.1    Anstey, N.M.2    Jacups, S.P.3    Fisher, D.A.4    Currie, B.J.5
  • 9
    • 33645065888 scopus 로고    scopus 로고
    • Melioidosis: Insights into the pathogenicity of Burkholderia pseudomallei
    • 10.1038/nrmicro1385 16541135
    • Wiersinga WJ Poll van der T White NJ Day NP Peacock SJ Melioidosis: insights into the pathogenicity of Burkholderia pseudomallei Nature Reviews Microbiology 2006, 4(4):272. 10.1038/nrmicro1385 16541135
    • (2006) Nature Reviews Microbiology , vol.4 , Issue.4 , pp. 272
    • Wiersinga, W.J.1    Poll, T.2    White, N.J.3    Day, N.P.4    Peacock, S.J.5
  • 10
    • 17444369030 scopus 로고    scopus 로고
    • Melioidosis: Epidemiology, pathophysiology, and management
    • 1082802 15831829 10.1128/CMR.18.2.383-416.2005
    • Cheng AC Currie BJ Melioidosis: Epidemiology, pathophysiology, and management Clinical Microbiology Reviews 2005, 18(2):383-416. 1082802 15831829 10.1128/CMR.18.2.383-416.2005
    • (2005) Clinical Microbiology Reviews , vol.18 , Issue.2 , pp. 383-416
    • Cheng, A.C.1    Currie, B.J.2
  • 12
  • 13
    • 29244477827 scopus 로고    scopus 로고
    • Bacterial genome adaptation to niches: Divergence of the potential virulence genes in three Burkholderia species of different survival strategies
    • 1343551 16336651 10.1186/1471-2164-6-174
    • Kim HS Schell MA Yu Y Ulrich RL Sarria SH Nierman WC DeShazer D Bacterial genome adaptation to niches: Divergence of the potential virulence genes in three Burkholderia species of different survival strategies BMC Genomics 2005, 6:174. 1343551 16336651 10.1186/ 1471-2164-6-174
    • (2005) BMC Genomics , vol.6 , pp. 174
    • Kim, H.S.1    Schell, M.A.2    Yu, Y.3    Ulrich, R.L.4    Sarria, S.H.5    Nierman, W.C.6    DeShazer, D.7
  • 14
    • 0034980876 scopus 로고    scopus 로고
    • Ecological fitness, genomic islands and bacterial pathogenicity: A Darwinian view of the evolution of microbes
    • 1083891 11375927
    • Hacker J Carniel E Ecological fitness, genomic islands and bacterial pathogenicity: A Darwinian view of the evolution of microbes EMBO Reports 2001, 2(5):376-381. 1083891 11375927
    • (2001) EMBO Reports , vol.2 , Issue.5 , pp. 376-381
    • Hacker, J.1    Carniel, E.2
  • 16
    • 0033758756 scopus 로고    scopus 로고
    • Pathogenicity islands and evolution of microbes
    • 10.1146/annurev.micro.54.1.641 11018140
    • Hacker J Kaper JB Pathogenicity islands and evolution of microbes Annual Review of Microbiology 2000, 54(1):641-679. 10.1146/ annurev.micro.54.1.641 11018140
    • (2000) Annual Review of Microbiology , vol.54 , Issue.1 , pp. 641-679
    • Hacker, J.1    Kaper, J.B.2
  • 17
    • 0029060923 scopus 로고
    • Dinucleotide relative abundance extremes: A genomic signature
    • 10.1016/S0168-9525(00)89076-9 7482779
    • Kariin S Burge C Dinucleotide relative abundance extremes: A genomic signature Trends in Genetics 1995, 11(7):283-290. 10.1016/ S0168-9525(00)89076-9 7482779
    • (1995) Trends in Genetics , vol.11 , Issue.7 , pp. 283-290
    • Kariin, S.1    Burge, C.2
  • 18
    • 39049169705 scopus 로고    scopus 로고
    • Resolving the structural features of genomic islands: A machine learning approach
    • 2203631 18071028 10.1101/gr.7004508
    • Vernikos GS Parkhill J Resolving the structural features of genomic islands: A machine learning approach Genome Research 2008, 18(2):331-342. 2203631 18071028 10.1101/gr.7004508
    • (2008) Genome Research , vol.18 , Issue.2 , pp. 331-342
    • Vernikos, G.S.1    Parkhill, J.2
  • 20
    • 33745972964 scopus 로고    scopus 로고
    • Genomic patterns of pathogen evolution revealed by comparison of Burkholderia pseudomallei, the causative agent of melioidosis, to avirulent Burkholderia thailandensis
    • 1508146 16725056 10.1186/1471-2180-6-46
    • Yu Y Kim HS Chua H Lin C Sim S Lin D Derr A Engels R DeShazer D Birren B et al. Genomic patterns of pathogen evolution revealed by comparison of Burkholderia pseudomallei, the causative agent of melioidosis, to avirulent Burkholderia thailandensis BMC Microbiology 2006, 6(1):46. 1508146 16725056 10.1186/1471-2180-6-46
    • (2006) BMC Microbiology , vol.6 , Issue.1 , pp. 46
    • Yu, Y.1    Kim, H.S.2    Chua, H.3    Lin, C.4    Sim, S.5    Lin, D.6    Derr, A.7    Engels, R.8    DeShazer, D.9    Birren, B.10
  • 21
    • 38749125193 scopus 로고    scopus 로고
    • Three pathogenicity islands of Vibrio cholerae can excise from the chromosome and form circular intermediates
    • 2223681 17993521 10.1128/JB.00562-07
    • Murphy RA Boyd EF Three pathogenicity islands of Vibrio cholerae can excise from the chromosome and form circular intermediates Journal of Bacteriology 2008, 190(2):636-647. 2223681 17993521 10.1128/JB.00562-07
    • (2008) Journal of Bacteriology , vol.190 , Issue.2 , pp. 636-647
    • Murphy, R.A.1    Boyd, E.F.2
  • 22
    • 0029963677 scopus 로고    scopus 로고
    • Cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulencefactors
    • 26189 8962108 10.1073/pnas.93.25.14648
    • Censini S Lange C Xiang Z Crabtree JE Ghiara P Borodovsky M Rappuoli R Covacci A cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulencefactors PNAS 1996, 93(25):14648-14653. 26189 8962108 10.1073/pnas.93.25.14648
    • (1996) PNAS , vol.93 , Issue.25 , pp. 14648-14653
    • Censini, S.1    Lange, C.2    Xiang, Z.3    Crabtree, J.E.4    Ghiara, P.5    Borodovsky, M.6    Rappuoli, R.7    Covacci, A.8
  • 23
    • 0036185907 scopus 로고    scopus 로고
    • Characterization of a novel insertion sequence, ISBp1, in Burkholderia pseudomallei
    • 10.1007/s00203-001-0389-8 11907683
    • Woo P Leung P Tsoi H-W Chan B Que T-L Yuen K-Y Characterization of a novel insertion sequence, ISBp1, in Burkholderia pseudomallei Archives of Microbiology 2002, 177(3):267-273. 10.1007/s00203-001-0389-8 11907683
    • (2002) Archives of Microbiology , vol.177 , Issue.3 , pp. 267-273
    • Woo, P.1    Leung, P.2    Tsoi, H.-W.3    Chan, B.4    Que, T.-L.5    Yuen, K.-Y.6
  • 24
    • 0036306494 scopus 로고    scopus 로고
    • Burkholderia thailandensis E125 harbors a temperate bacteriophage specific for Burkholderia mallei
    • 135171 12081973 10.1128/JB.184.14.4003-4017.2002
    • Woods DE Jeddeloh JA Fritz DL DeShazer D Burkholderia thailandensis E125 harbors a temperate bacteriophage specific for Burkholderia mallei Journal of Bacteriology 2002, 184(14):4003-4017. 135171 12081973 10.1128/ JB.184.14.4003-4017.2002
    • (2002) Journal of Bacteriology , vol.184 , Issue.14 , pp. 4003-4017
    • Woods, D.E.1    Jeddeloh, J.A.2    Fritz, D.L.3    DeShazer, D.4
  • 25
    • 2942541136 scopus 로고    scopus 로고
    • Genomic diversity of Burkholderia pseudomallei clinical isolates: Subtractive hybridization reveals a Burkholderia mallei-specific prophage in B. pseudomallei 1026b
    • 419931 15175308 10.1128/JB.186.12.3938-3950.2004
    • DeShazer D Genomic diversity of Burkholderia pseudomallei clinical isolates: Subtractive hybridization reveals a Burkholderia mallei-specific prophage in B. pseudomallei 1026b Journal of Bacteriology 2004, 186(12):3938-3950. 419931 15175308 10.1128/ JB.186.12.3938-3950.2004
    • (2004) Journal of Bacteriology , vol.186 , Issue.12 , pp. 3938-3950
    • DeShazer, D.1
  • 27
    • 33749268388 scopus 로고    scopus 로고
    • Genome-wide expression analysis of Burkholderia pseudomallei infection in a hamster model of acute melioidosis
    • 10.1128/IAI.00737-06
    • Tuanyok A Tom M Dunbar J Woods DE Genome-wide expression analysis of Burkholderia pseudomallei infection in a hamster model of acute melioidosis Infection and Immunity 2006, 74(10):5465-5476. 10.1128/ IAI.00737-06
    • (2006) Infection and Immunity , vol.74 , Issue.10 , pp. 5465-5476
    • Tuanyok, A.1    Tom, M.2    Dunbar, J.3    Woods, D.E.4
  • 29
    • 5644289616 scopus 로고    scopus 로고
    • Identification of a novel two-partner secretion system from Burkholderia pseudomallei
    • 10.1007/s00438-004-1039-z
    • Brown NF Logue CA Boddey JA Scott R Hirst RG Beacham IR Identification of a novel two-partner secretion system from Burkholderia pseudomallei Molecular Genetics and Genomics 2004, 272(2):204-215. 10.1007/ s00438-004-1039-z
    • (2004) Molecular Genetics and Genomics , vol.272 , Issue.2 , pp. 204-215
    • Brown, N.F.1    Logue, C.A.2    Boddey, J.A.3    Scott, R.4    Hirst, R.G.5    Beacham, I.R.6
  • 32
    • 33645909225 scopus 로고    scopus 로고
    • Use of a variable amplicon typing scheme reveals considerable variation in the accessory genomes of isolates of Burkholderia pseudomallei
    • 1448637 16597858 10.1128/JCM.44.4.1323-1334.2006
    • Duangsonk K Gal D Mayo M Hart CA Currie BJ Winstanley C Use of a variable amplicon typing scheme reveals considerable variation in the accessory genomes of isolates of Burkholderia pseudomallei Journal of Clinical Microbiology 2006, 44(4):1323-1334. 1448637 16597858 10.1128/ JCM.44.4.1323-1334.2006
    • (2006) Journal of Clinical Microbiology , vol.44 , Issue.4 , pp. 1323-1334
    • Duangsonk, K.1    Gal, D.2    Mayo, M.3    Hart, C.A.4    Currie, B.J.5    Winstanley, C.6
  • 33
    • 20444460314 scopus 로고    scopus 로고
    • Integrative genomic, transcriptional, and proteomic diversity in natural isolates of the human pathogen Burkholderia pseudomallei
    • 1151743 15937190 10.1128/JB.187.12.4276-4285.2005
    • Ou K Ong C Koh SY Rodrigues F Sim SH Wong D Ooi CH Ng KC Jikuya H Yau CC et al. Integrative genomic, transcriptional, and proteomic diversity in natural isolates of the human pathogen Burkholderia pseudomallei Journal of Bacteriology 2005, 187(12):4276-4285. 1151743 15937190 10.1128/ JB.187.12.4276-4285.2005
    • (2005) Journal of Bacteriology , vol.187 , Issue.12 , pp. 4276-4285
    • Ou, K.1    Ong, C.2    Koh, S.Y.3    Rodrigues, F.4    Sim, S.H.5    Wong, D.6    Ooi, C.H.7    Ng, K.C.8    Jikuya, H.9    Yau, C.C.10
  • 35
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucleic Acids Symposium Series 1998, 41:95-98.
    • (1998) Nucleic Acids Symposium Series , vol.41 , pp. 95-98
    • Hall, T.1
  • 36
    • 14644438364 scopus 로고    scopus 로고
    • Circular genome visualization and exploration using CGView
    • 10.1093/bioinformatics/bti054 15479716
    • Stothard P Wishart DS Circular genome visualization and exploration using CGView Bioinformatics 2005, 21(4):537-539. 10.1093/bioinformatics/ bti054 15479716
    • (2005) Bioinformatics , vol.21 , Issue.4 , pp. 537-539
    • Stothard, P.1    Wishart, D.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.