Interaction of gramicidin with DPPC/DODAB bilayer fragments

Biochimica et Biophysica Acta - Biomembranes

Volumn 1818, Issue 12, 2012, Pages 3064-3071

  Carvalho, Camilla A ^a   Olivares Ortega, Constanza ^a   Soto Arriaza, Marco A ^a,b   Carmona Ribeiro, Ana M ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE   (Chile)

Author keywords

Bilayer fragments; Dioctadecyldimethylammonium bromide; Dipalmitoylphosphatidylcholine; Gramicidin; Spectroscopic method; Vesicle

Indexed keywords

ACRYLAMIDE; DIMETHYLDIOCTADECYLAMMONIUM BROMIDE; DIPALMITOYLPHOSPHATIDYLCHOLINE; GLUCOSE; GRAMICIDIN; POTASSIUM CHLORIDE; SODIUM CHLORIDE; TRIFLUOROETHANOL; TRYPTOPHAN;

ARTICLE; BILAYER FRAGMENT; BILAYER MEMBRANE; CHEMICAL INTERACTION; CIRCULAR DICHROISM; CONTROLLED STUDY; FLUORESCENCE SPECTROSCOPY; LIGHT SCATTERING; LIPID BILAYER; MEMBRANE TRANSPORT; MEMBRANE VESICLE; PRIORITY JOURNAL; PROTEIN CONFORMATION; ZETA POTENTIAL;

1,2-DIPALMITOYLPHOSPHATIDYLCHOLINE; GRAMICIDIN; LIPID BILAYERS; LIPIDS; MOLECULAR CONFORMATION; PHASE TRANSITION; QUATERNARY AMMONIUM COMPOUNDS;

EID: 84865339223     PISSN: 00052736     EISSN: 18792642     Source Type: Journal    
DOI: 10.1016/j.bbamem.2012.08.008     Document Type: Article

References (54)

1. D.W. Urry, M.C. Goodall, J.D. Glickson, and D.F. Mayers The gramicidin A transmembrane channel: characteristics of head-to-head dimerized (L, D) helices Proc. Natl. Acad. Sci. U. S. A. 68 1971 1907 1911
2. B.M. Burkhart, R.M. Gassman, D.A. Langs, W.A. Pangborn, W.L. Duax, and V. Pletnev Gramicidin D conformation, dynamics and membrane ion transport Biopolymers 51 1999 129 144
3. D.A. Kelkar, and A. Chattopadhyay The gramicidin ion channel: a model membrane protein Biochim. Biophys. Acta 1768 2007 2011 2025
4. F.R. Svensson, P. Lincoln, B. Nordén, and E.K. Esbjörner Tryptophan orientations in membrane-bound gramicidin and melittin - a comparative linear dichroism study on transmembrane and surface-bound peptides Biochim. Biophys. Acta 1808 2011 219 228
5. W. Hu, K.C. Lee, and T.A. Cross Tryptophans in membrane proteins: indole ring orientations and functional implications in the gramicidin channel Biochemistry 32 1993 7035 7047
6. R.E. Koeppe, and O.S. Andersen Engineering the gramicidin channel Annu. Rev. Biophys. Biomol. Struct. 25 1996 231 258
7. H. Sun, D.V. Greathouse, O.S. Andersen, and R.E. Koeppe The preference of tryptophan for membrane interfaces: insights from n-methylation of tryptophans in gramicidin channels J. Biol. Chem. 283 2008 22,233 22,243
8. J.A. Lundbaek, S.A. Collingwood, H.I. Ingólfsson, R. Kapoor, and O.S. Andersen Lipid bilayer regulation of membrane protein function: gramicidin channels as molecular force probes J. R. Soc. Interface 7 2010 373 395
9. J.R. Elliott, D. Needham, J.P. Dilger, and D.A. Haydon The effects of bilayer thickness and tension on gramicidin single-channel lifetime Biochim. Biophys. Acta 735 1983 95 103
10. D.A. Kelkar, and A. Chattopadhyay Modulation of gramicidin channel conformation and organization by hydrophobic mismatch in saturated phosphatidylcholine bilayers Biochim. Biophys. Acta 1768 2007 1103 1113
11. B.G. Dzikovski, P.P. Borbat, and J.H. Freed Spin-labeled gramicidin a: channel formation and dissociation Biophys. J. 87 2004 3504 3517
12. B.G. Dzikovski, P.P. Borbat, and J.H. Freed Channel and nonchannel forms of spin-labeled gramicidin in membranes and their equilibria J. Phys. Chem. B 115 2011 176 185
13. M. Ge, and J.H. Freed Electron-spin resonance study of aggregation of gramicidin in dipalmitoylphosphatidylcholine bilayers and hydrophobic mismatch Biophys. J. 76 1999 264 280
14. C. Steinem, A. Janshoff, W.P. Ulrich, M. Sieber, and H.J. Galla Impedance analysis of supported lipid bilayer membranes: a scrutiny of different preparation techniques Biochim. Biophys. Acta 1279 1996 169 180
15. C. Steinem, A. Janshoff, H.J. Galla, and M. Sieber Impedance analysis of ion transport through gramicidin channels incorporated in solid supported lipid bilayers Bioelectrochem. Bioenerg. 42 1997 213 220
16. D. Jamróz, M. Kepczynski, and M. Nowakowska Molecular structure of the dioctadecyldimethylammonium bromide (DODAB) bilayer Langmuir 26 2010 15,076 15,079
17. C.N. Sobral, M.A. Soto, and A.M. Carmona-Ribeiro Characterization of DODAB/DPPC vesicles Chem. Phys. Lipids 152 2008 38 45
18. A.M. Carmona-Ribeiro Lipid bilayer fragments and disks in drug delivery Curr. Med. Chem. 13 2006 1359 1370
19. A. Nath, W.M. Atkins, and S.G. Sligar Applications of phospholipid bilayer nanodiscs in the study of membranes and membrane proteins Biochemistry 46 2007 2059 2069
20. T.H. Bayburt, and S.G. Sligar Single-molecule height measurements on microsomal cytochrome P450 in nanometer-scale phospholipid bilayer disks Proc. Natl. Acad. Sci. U. S. A. 99 2002 6725 6730
21. E.N. Lyukmanova, Z.O. Shenkarev, and A.S. Paramonov Lipid-protein nanoscale bilayers: a versatile medium for NMR investigations of membrane proteins and membrane-active peptides J. Am. Chem. Soc. 130 2008 2140 2141
22. G.L. Hazelbauer, J.J. Falke, and J.S. Parkinson Bacterial chemoreceptors: high-performance signaling in networked arrays Trends Biochem. Sci. 33 2008 9 19
23. R. Lawaczeck, M. Kainosho, and S.I. Chan The formation and annealing of structural defects in lipid bilayer vesicles Biochim. Biophys. Acta 443 1976 313 330
24. M. Almgren Mixed micelles and other structures in the solubilization of bilayer lipid membranes by surfactants Biochim. Biophys. Acta 1508 2000 146 163
25. E. Johansson, C. Engvall, M. Arfvidsson, P. Lundahl, and K. Edwards Development and initial evaluation of PEG-stabilized bilayer disks as novel model membranes Biophys. Chem. 113 2005 183 192
26. E. Johansson, A. Lundquist, S. Zuo, and K. Edwards Nanosized bilayer disks: attractive model membranes for drug partition studies Biochim. Biophys. Acta 1768 2007 1518 1525
27. R.B. Pansu, B. Arrio, J. Roncin, and J. Faure Vesicles versus membrane fragments in DODAC suspensions J. Phys. Chem. 94 1990 796 801
28. M. Andersson, L. Hammarstrom, and K. Edwards Effect of bilayer phase transitions on vesicle structure, and its influence on the kinetics of viologen reduction J. Phys. Chem. 39 1995 14,531 14,538
29. H.W. Meyer, W. Richter, W. Rettig, and M. Stumpf Bilayer fragments and bilayered micelles (bicelles) of dimyristoylphosphatidylglycerol (DMPG) are induced by storage in distilled water at 4 °C Colloids Surf. A: Physicochem. Eng. Aspects 183-185 2001 495 504
30. A.M. Carmona-Ribeiro, and H. Chaimovich Preparation and characterization of large dioctadecyldimethylammonium chloride liposomes and comparison with small sonicated vesicles Biochim. Biophys. Acta 733 1983 172 179
31. A.M. Carmona-Ribeiro, C.E. Castuma, A. Sesso, and S. Schreier Bilayer structure and stability in dihexadecyl phosphate dispersions J. Phys. Chem. 95 1991 5361 5366
32. J. Cocquyt, U. Olsson, G. Olofsson, and P. van der Meeren Temperature quenched DODAB dispersions: fluid and solid state coexistence and complex formation with oppositely charged surfactant Langmuir 20 2004 3906 3912
33. D.B. Vieira, L.F. Pacheco, and A.M. Carmona-Ribeiro Assembly of a model hydrophobic drug into cationic bilayer fragments J. Colloid Interface Sci. 293 2006 240 247
34. D.B. Vieira, and A.M. Carmona-Ribeiro Cationic nanoparticles for delivery of amphotericin B: preparation, characterization and activity in vitro J. Nanobiotechnol. 6 2008 6
35. N. Lincopan, N.M. Espíndola, A.J. Vaz, M.H. da Costa, E. Faquim-Mauro, and A.M. Carmona-Ribeiro Novel immunoadjuvants based on cationic lipid: Preparation, characterization and activity in vivo Vaccine 42 2009 5760 5771
36. J.H. Rozenfeld, S.R. Silva, P.A. Ranéia, E. Faquim-Mauro, and A.M. Carmona-Ribeiro Stable assemblies of cationic bilayer fragments and CpG oligonucleotide with enhanced immunoadjuvant activity in vivo J. Control. Release 160 2012 367 373
37. J. Repakova, J.M. Holopainen, M.R. Morrow, M.C. McDonald, P. Capkova, and I. Vattulainen Influence of DPH on the structure and dynamics of a DPPC bilayer Biophys. J. 88 2005 3398 3410
38. T. Parasassi, G. Ravagnan, R.M. Rusch, and E. Gratton Modulation and dynamics of phase properties in phospholipid mixtures detected by Laurdan fluorescence Photochem. Photobiol. 57 1993 403 410
39. O. Schales, and S. Schales A simple and accurate method for the determination of chloride in biological fluids J. Biol. Chem. 140 1941 879 884
40. A.M. Carmona-Ribeiro Preparation and characterization of biomimetic nanoparticles for drug delivery M. Soloviev, Nanoparticles in Biology and Medicine Methods Mol. Biol. 906 2012 283 294 10.1007/978-1-61779-953-2-22
41. E. Grabowski, and I. Morrison Particle size Distribution from Analysis of Quasi-elastic Light Scattering Data 1983 Wiley-Interscience New York 199
42. M.A. Soto, C.P. Sotomayor, and E. Lissi Effect of gramicidin addition upon the physicochemical properties of dipalmitoyl phosphatidyl choline large unilamellar vesicles J. Photochem. Photobiol. A 152 2002 79 93
43. J.A. Killian, K.U. Prasad, D. Hains, and D.W. Urry The membrane as an environment of minimal interconversion. A circular dichroism study on the solvent dependence of the conformational behavior of gramicidin in diacylphosphatidylcholine model membranes Biochemistry 27 1988 4848 4855
44. M.R. Eftink, and C.A. Ghiron Exposure of tryptophanyl residues in proteins. Quantitative determination by fluorescence quenching studies Biochemistry 15 1976 672 680
45. W.R. Veatch, E.T. Fossel, and E.R. Blout Conformation of gramicidin A Biochemistry 13 1974 5249 5256
46. N. Abdul-Manant, and J.F. Hinton Conformation states of gramicidin A along the pathway to the formation of channels in model membranes determined by 2D NMR and circular dichroism spectroscopy Biochemistry 33 1994 6773 6783
47. A.M. Carmona-Ribeiro, and H. Chaimovich Salt-induced aggregation and fusion of dioctadecyldimethylammonium chloride and sodium dihexadecylphosphate vesicles Biophys. J. 50 1986 621 628
48. 13C nuclear magnetic resonance study of gramicidin A in monomer and dimer forms Biochemistry 13 1974 5264 5275
49. A. Koch Some calculations on the turbidity of mitochondria and bacteria Biochim. Biophys. Acta 51 1961 429 441
50. T. Xiang, and B.D. Anderson Influence of a transmembrane protein on the permeability of small molecules across lipid membranes J. Membr. Biol. 173 2000 187 201
51. T.-X. Xiang, Y.-H. Xu, and B.D. Anderson The barrier domain for solute permeation varies with lipid bilayer phase structure J. Membr. Biol. 165 1998 77 90
52. B. Christiaens, S. Symoens, S. Verheyden, Y. Engelborghs, A. Joliot, A. Prochiantz, J. Vandekerckhove, M. Rosseneu, and B. Vanloo Tryptophan fluorescence study of the interaction of penetratin peptides with model membranes Eur. J. Biochem. 269 2002 2918 2926
53. A.M. Carmona-Ribeiro Bilayer-forming synthetic lipids: drugs or carriers? Curr. Med. Chem. 10 2003 2425 2446
54. D.B. Vieira, and A.M. Carmona-Ribeiro Synthetic bilayer fragments for solubilization of amphotericin B J. Colloid Interface Sci. 244 2001 427 431