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Volumn 95, Issue 2, 2012, Pages 499-509

A targeted gene knockout method using a newly constructed temperature-sensitive plasmid mediated homologous recombination in Bifidobacterium longum

Author keywords

Bifidobacteria; Gene knockout; Homologous recombination; Mutagenesis; Temperature sensitive plasmid

Indexed keywords

BIFIDOBACTERIA; BIFIDOBACTERIUM; BIFIDOBACTERIUM ADOLESCENTIS; BIFIDOBACTERIUM LONGUM; DNA SEQUENCE ANALYSIS; ERROR PRONE PCR; GENE KNOCKOUT; GENE-KNOCKOUT EXPERIMENTS; HOMOLOGOUS RECOMBINATION; HOMOLOGOUS SEQUENCES; MICROFLORA; MUTANT PLASMIDS; RANDOM MUTAGENESIS; RECOMBINATION FREQUENCIES; SHUTTLE VECTOR; SITE DIRECTED MUTAGENESIS; TEMPERATURE-SENSITIVE;

EID: 84864706348     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-012-4090-4     Document Type: Article
Times cited : (46)

References (30)
  • 1
    • 0027151798 scopus 로고
    • High-efficiency gene inactivation and replacement system for gram-positive bacteria
    • Biswas I, Gruss A, Ehrlich SD, Maguin E (1993) High-efficiency gene inactivation and replacement system for gram-positive bacteria. J Bacteriol 175:3628-3635 (Pubitemid 23163409)
    • (1993) Journal of Bacteriology , vol.175 , Issue.11 , pp. 3628-3635
    • Biswas, I.1    Gruss, A.2    Ehrlich, S.D.3    Maguin, E.4
  • 2
    • 78650566574 scopus 로고    scopus 로고
    • Deletion of sua gene reduces the ability of Streptococcus uberis to adhere to and internalize into bovine mammary epithelial cells
    • Chen XY, Dego OK, Almeida RA, Fuller TE, Luther DA, Oliver SP (2011) Deletion of sua gene reduces the ability of Streptococcus uberis to adhere to and internalize into bovine mammary epithelial cells. Vet Microbiol 147:426-434
    • (2011) Vet Microbiol , vol.147 , pp. 426-434
    • Chen, X.Y.1    Dego, O.K.2    Almeida, R.A.3    Fuller, T.E.4    Luther, D.A.5    Oliver, S.P.6
  • 4
    • 33750999085 scopus 로고    scopus 로고
    • Molecular analysis of tet(W) gene-mediated tetracycline resistance in dominant intestinal Bifidobacterium species from healthy humans
    • DOI 10.1128/AEM.00486-06
    • Florez AB, Ammor MS, Alvarez-Martin P, Margolles A, Mayo B (2006) Molecular analysis of tet (W) gene-mediated tetracycline resistance in dominant intestinal Bifidobacterium species from healthy humans. Appl Environ Microbiol 72:7377-7379 (Pubitemid 44748459)
    • (2006) Applied and Environmental Microbiology , vol.72 , Issue.11 , pp. 7377-7379
    • Florez, A.B.1    Ammor, M.S.2    Alvarez-Martin, P.3    Margolles, A.4    Mayo, B.5
  • 5
    • 29144528930 scopus 로고    scopus 로고
    • Insertion-duplication mutagenesis of Salmonella enterica and related species using a novel thermosensitive vector
    • DOI 10.1016/j.plasmid.2005.06.003, PII S0147619X05000570
    • Fuchs TM, Klumpp J, Przybilla K (2006) Insertion-duplication mutagenesis of Salmonella enterica and related species using a novel thermosensitive vector. Plasmid 55:39-49 (Pubitemid 41796951)
    • (2006) Plasmid , vol.55 , Issue.1 , pp. 39-49
    • Fuchs, T.M.1    Klumpp, J.2    Przybilla, K.3
  • 7
    • 0029018327 scopus 로고
    • Tight regulation, modulation, and high-level expression by vectors containing the arabinose P-BAD promoter
    • Guzman LM, Belin D, Carson MJ, Beckwith J (1995) Tight regulation, modulation, and high-level expression by vectors containing the arabinose P-BAD promoter. J Bacteriol 177:4121-4130
    • (1995) J Bacteriol , vol.177 , pp. 4121-4130
    • Guzman, L.M.1    Belin, D.2    Carson, M.J.3    Beckwith, J.4
  • 9
    • 32544461879 scopus 로고    scopus 로고
    • A simple and effective chromosome modification method for largescale deletion of genome sequences and identification of essential genes in fission yeast
    • Hirashima K, Iwaki T, Takegawa K, Giga-Hama Y, Tohda H (2006) A simple and effective chromosome modification method for largescale deletion of genome sequences and identification of essential genes in fission yeast. Nucleic Acids Res 34:e11
    • (2006) Nucleic Acids Res , vol.34
    • Hirashima, K.1    Iwaki, T.2    Takegawa, K.3    Giga-Hama, Y.4    Tohda, H.5
  • 10
    • 0024556150 scopus 로고
    • Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension
    • DOI 10.1016/0378-1119(89)90359-4
    • Horton RM, Hunt HD, Ho SN, Pullen JK, Pease LR (1989) Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77:61-68 (Pubitemid 19125654)
    • (1989) Gene , vol.77 , Issue.1 , pp. 61-68
    • Horton, R.M.1    Hunt, H.D.2    Ho, S.N.3    Pullen, J.K.4    Pease, L.R.5
  • 11
    • 0017135816 scopus 로고
    • Mutagenesis of plasmid DNA with hydroxylamine: Isolation of mutants of multi-copy plasmids
    • Humphreys GO, Willshaw GA, Smith HR, Anderson ES (1976) Mutagenesis of plasmid DNA with hydroxylamine: isolation of mutants of multi-copy plasmids. Mol Gen Genet 145:101-108
    • (1976) Mol Gen Genet , vol.145 , pp. 101-108
    • Humphreys, G.O.1    Willshaw, G.A.2    Smith, H.R.3    Anderson, E.S.4
  • 13
    • 0026801262 scopus 로고
    • New thermosensitive plasmid for gram-positive bacteria
    • Maguin E, Duwat P, Hege T, Ehrlich D, Gruss A (1992) New thermosensitive plasmid for gram-positive bacteria. J Bacteriol 174:5633-5638
    • (1992) J Bacteriol , vol.174 , pp. 5633-5638
    • Maguin, E.1    Duwat, P.2    Hege, T.3    Ehrlich, D.4    Gruss, A.5
  • 14
    • 0031181083 scopus 로고    scopus 로고
    • Construction of Escherichia coli Bifidobacterium longum shuttle vector transforming B. longum 105-A and 108-A
    • Matsumura H, Takeuchi A, Kano Y (1997) Construction of Escherichia coli Bifidobacterium longum shuttle vector transforming B. longum 105-A and 108-A. Biosci Biotechnol Biochem 61:1211-1212
    • (1997) Biosci Biotechnol Biochem , vol.61 , pp. 1211-1212
    • Matsumura, H.1    Takeuchi, A.2    Kano, Y.3
  • 15
    • 0028149645 scopus 로고
    • Transformation of Bifidobacterium longum with pRM2, a constructed Escherichia-coli B. longum shuttle vector
    • Missich R, Sgorbati B, Leblanc DJ (1994) Transformation of Bifidobacterium longum with pRM2, a constructed Escherichia-coli B. longum shuttle vector. Plasmid 32:208-211
    • (1994) Plasmid , vol.32 , pp. 208-211
    • Missich, R.1    Sgorbati, B.2    Leblanc, D.J.3
  • 16
    • 0025647670 scopus 로고
    • Bifidobacteria and their role in human health
    • Mitsuoka T (1990) Bifidobacteria and their role in human health. J Ind Microbiol 6:263-267
    • (1990) J Ind Microbiol , vol.6 , pp. 263-267
    • Mitsuoka, T.1
  • 17
    • 33750478693 scopus 로고    scopus 로고
    • Temperature-sensitive cloning vector for Corynebacterium glutamicum
    • DOI 10.1016/j.plasmid.2006.05.003, PII S0147619X06000539
    • Nakamura J, Kanno S, Kimura E, Matsui K, Nakamatsu T, Wachi M (2006) Temperature-sensitive cloning vector for Corynebacterium glutamicum. Plasmid 56:179-186 (Pubitemid 44649208)
    • (2006) Plasmid , vol.56 , Issue.3 , pp. 179-186
    • Nakamura, J.1    Kanno, S.2    Kimura, E.3    Matsui, K.4    Nakamatsu, T.5    Wachi, M.6
  • 18
    • 33644857534 scopus 로고    scopus 로고
    • Construction of improved temperature-sensitive and mobilizable vectors and their use for constructing mutations in the adhesin-encoding acm gene of poorly transformable clinical Enterococcus faecium strains
    • Nallapareddy SR, Singh KV, Murray BE (2006) Construction of improved temperature-sensitive and mobilizable vectors and their use for constructing mutations in the adhesin-encoding acm gene of poorly transformable clinical Enterococcus faecium strains. Appl Environ Microbiol 72:334-345
    • (2006) Appl Environ Microbiol , vol.72 , pp. 334-345
    • Nallapareddy, S.R.1    Singh, K.V.2    Murray, B.E.3
  • 19
    • 0029923078 scopus 로고    scopus 로고
    • Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction
    • DOI 10.1016/0923-2508(96)80213-0
    • Rossi M, Brigidi P, Rodriguez A, Matteuzzi D (1996) Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction. Res Microbiol 147:133-143 (Pubitemid 26108122)
    • (1996) Research in Microbiology , vol.147 , Issue.3 , pp. 133-143
    • Rossi, M.1    Brigidi, P.2    Gonzalez Vara Y Rodriguez, A.3    Matteuzzi, D.4
  • 22
    • 34547720649 scopus 로고    scopus 로고
    • Targeting the Bacillus subtilis genome: An efficient and clean method for gene disruption
    • DOI 10.1016/j.mimet.2007.05.004, PII S016770120700173X
    • Sanchez H, Cozar AC, Martinez-Jimenez MI (2007) Targeting the Bacillus subtilis genome: an efficient and clean method for gene disruption. J Microbiol Methods 70:389-394 (Pubitemid 47304458)
    • (2007) Journal of Microbiological Methods , vol.70 , Issue.3 , pp. 389-394
    • Sanchez, H.1    Cozar, M.C.2    Martinez-Jimenez, M.I.3
  • 24
    • 80052940763 scopus 로고    scopus 로고
    • Plasmid artificial modification
    • Williams JA (ed) Springer, New York
    • Suzuki T, Yasui K (2011) Plasmid artificial modification. In: Williams JA (ed) Strain engineering-methods and protocols. Springer, New York, pp 309-326
    • (2011) Strain Engineering-methods and Protocols. , pp. 309-326
    • Suzuki, T.1    Yasui, K.2
  • 25
    • 0023177156 scopus 로고
    • Characterization of the sppA gene coding for protease IV, a signal peptide peptidase of Escherichia coli
    • Suzuki T, Itoh A, Ichihara S, Mizushima S (1987) Characterization of the sppA gene coding for protease IV, a signal peptide peptidase of Escherichia coli. J Bacteriol 169:2523-2528 (Pubitemid 17104310)
    • (1987) Journal of Bacteriology , vol.169 , Issue.6 , pp. 2523-2528
    • Suzuki, T.1    Itoh, A.2    Ichihara, S.3    Mizushima, S.4
  • 26
    • 0034781075 scopus 로고    scopus 로고
    • Thermosensitive suicide vectors for gene replacement in Streptococcus suis
    • DOI 10.1006/plas.2001.1532
    • Takamatsu D, Osaki M, Sekizaki T (2001) Thermosensitive suicide vectors for gene replacement in Streptococcus suis. Plasmid 46:140-148 (Pubitemid 32980676)
    • (2001) Plasmid , vol.46 , Issue.2 , pp. 140-148
    • Takamatsu, D.1    Osaki, M.2    Sekizaki, T.3
  • 27
    • 2442530687 scopus 로고    scopus 로고
    • Gene replacement method for determining conditions in which Bacillus subtilis genes are essential or dispensable for cell viability
    • DOI 10.1007/s00253-003-1502-5
    • Yakhnin H, Babitzke P (2004) Gene replacement method for determining conditions in which Bacillus subtilis genes are essential or dispensable for cell viability. Appl Microbiol Biotechnol 64:382-386 (Pubitemid 38626463)
    • (2004) Applied Microbiology and Biotechnology , vol.64 , Issue.3 , pp. 382-386
    • Yakhnin, H.1    Babitzke, P.2
  • 29
    • 67949095996 scopus 로고    scopus 로고
    • Intra-species diversity between seven Bifidobacterium adolescentis strains identified by genome-wide tiling array analysis
    • Yasui K, Tabata M, Yamada S, Abe T, Ikemura T, Osawa R, Suzuki T (2009b) Intra-species diversity between seven Bifidobacterium adolescentis strains identified by genome-wide tiling array analysis. Biosci Biotechnol Biochem 73:1422-1424
    • (2009) Biosci Biotechnol Biochem , vol.73 , pp. 1422-1424
    • Yasui, K.1    Tabata, M.2    Yamada, S.3    Abe, T.4    Ikemura, T.5    Osawa, R.6    Suzuki, T.7
  • 30
    • 76649107894 scopus 로고    scopus 로고
    • A simple method to introduce marker-free genetic modifications into the chromosome of naturally nontransformable Bacillus amyloliquefaciens strains
    • Zakataeva NP, Nikitina OV, Gronskiy SV, Romanenkov DV, Livshits VA (2010) A simple method to introduce marker-free genetic modifications into the chromosome of naturally nontransformable Bacillus amyloliquefaciens strains. Appl Microbiol Biotechnol 85:1201-1209
    • (2010) Appl Microbiol Biotechnol , vol.85 , pp. 1201-1209
    • Zakataeva, N.P.1    Nikitina, O.V.2    Gronskiy, S.V.3    Romanenkov, D.V.4    Livshits, V.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.