Measuring the kinetics of amyloid fibril elongation using quartz crystal microbalances

Methods in Molecular Biology

Volumn 849, Issue , 2012, Pages 101-119

  Buell, Alexander K ^a   Dobson, Christopher M ^a   Welland, Mark E ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

AFM; Alzheimer's disease; Amyloid disorders; Biosensor; Kinetics; Parkinson's disease; Quartz crystal microbalance; Surface attachment

Indexed keywords

AMYLOID; AMYLOID PRECURSOR PROTEIN; ALPHA SYNUCLEIN; AMYLOID BETA PROTEIN; AMYLOID BETA PROTEIN (1 42); AMYLOID BETA-PROTEIN (1-42); CYSTAMINE; GOLD; INSULIN; PEPTIDE FRAGMENT; PHOSPHATIDYLINOSITOL 3 KINASE;

ABSORPTION; ALZHEIMER DISEASE; AMYLOID PLAQUE; ARTICLE; BIOSENSOR; CRYSTAL; DENSITY; FIBER; IONIC STRENGTH; KINETICS; NON INSULIN DEPENDENT DIABETES MELLITUS; PARKINSON DISEASE; PRIORITY JOURNAL; QUARTZ CRYSTAL MICROBALANCE; SURFACE PLASMON RESONANCE; ULTRASOUND; ANIMAL; CATTLE; CHEMISTRY; ENZYME ACTIVATION; HUMAN; INSTRUMENTATION; METABOLISM; METHODOLOGY; PH; PROTEIN MULTIMERIZATION; PROTEIN SECONDARY STRUCTURE; SRC HOMOLOGY DOMAIN; SURFACE PROPERTY;

ALPHA-SYNUCLEIN; AMYLOID; AMYLOID BETA-PEPTIDES; ANIMALS; CATTLE; CYSTAMINE; ENZYME ACTIVATION; GOLD; HUMANS; HYDROGEN-ION CONCENTRATION; INSULIN; KINETICS; PEPTIDE FRAGMENTS; PHOSPHATIDYLINOSITOL 3-KINASES; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, SECONDARY; QUARTZ CRYSTAL MICROBALANCE TECHNIQUES; SRC HOMOLOGY DOMAINS; SURFACE PROPERTIES;

EID: 84864634085     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-551-0_8     Document Type: Article

References (20)

1. T.P.J. Knowles, S.G.L. Devlin, S. Meehan, S. Auer, C.M. Dobson and M.E. Welland, Kinetics and thermodynamics of amyloid formation from direct measurements of fl uctuations in fi bril mass, Proc Natl Acad Sci , 2007, 104, 10016-10021
2. B.Y. Feng, B.H. Toyama, H. Wille, D.W. Colby, S. R. Collins , B. C. H. May, S. B. Prusiner, J. Weissman and B.K. Shoichet, Small-molecule aggregates inhibit amyloid polymerization, Nat Chem Biol, 2008, 4, 197-199
3. M.R. Nilsson. Techniques to study amyloid fi bril formation in vitro, Methods , 2004, 34, 151-160
4. W.-P. Hu, G.-L. Chang, S.-J. Chen and Y.-M. Kuo. Kinetic analysis of beta-amyloid peptideaggregation induced by metal ions based on surface plasmon resonance biosensing, J Neurosci Methods, 2006, 154, 190-197
5. S. Kawatake, Y. Nishimura, S. Sakaguchi, T. Iwaki, K. Doh-ura. Surface plasmon resonance analysis for the screening of anti-prion compounds, Biol Pharm Bull , 2006, 29, 927-932
6. M. B. Hovgaard, M. Dong, D.E. Otzen, F. Besenbacher, Quartz crystal microbalance studies of multilayer glucagon fi brillation at the solid-liquid interface, Biophys J , 2007, 93, 2162-2169
7. J.A. Kotarek, K.C. Johnson and M.A. Moss, Quartz crystal microbalance analysis of growth kinetics for aggregation intermediates of the amyloid-beta protein, Anal Biochem , 2008, 378, 15-24
8. G. Sauerbrey, Verwendung Von Schwingquarzen Zur Wägung Dünner Schichten Und Zur Mikrowägung, Zeitschr f Physik, 1959, 155, 206-222
9. K.K. Kanazawa and J.G. Gordon II, The oscillation frequency of a quartz resonator in contact with liquid, Anal Chim Acta , 1985, 175, 99-105
10. C.E. Reed, K.K. Kanazawa and J.H. Kaufman, Physical description of a viscoelastically loaded AT cut quartz resonator, J Appl Phys , 1990, 68, 1993-2001
11. M.V. Voinova, M. Rodahl, M. Johnson and B. Kasemo, Viscoelastic Acoustic Response of Layered Polymer Films at Fluid-solid Interfaces: Continuum Mechanics Approach, Pysica Scripta , 1999, 59, 391-396
12. T.P.J. Knowles, C.A. Waudby, G.L. Devlin, S.I.A. Cohen, A. Aguzzi, M. Vendruscolo, E.M. Terentjev, M.E. Welland and C.M. Dobson, An analytical solution to the kinetics of breakable fi lament assembly, Science , 2007, 326, 1533-1537
13. A.K. Buell, D.A. White, C. Meier, M.E. Welland, T.P.J. Knowles and C.M. Dobson, Surface attachment of protein fi brils via covalent modifi cation strategies, J Phys Chem B, 2010, 114, 10925-10938
14. G. McHale and M.I. Newton, Surface roughness and interfacial slip boundary condition for quartz crystal microbalances, J Appl Phys, 2004, 95, 373-380
15. A.K. Buell, C.M. Dobson, T.P.J. Knowles, and M.E. Welland, Interactions between amyloidophilic dyes and their relevance to studies of amyloid inhibitors, Biophys J, 2010, 99(10), 3492-3497
16. D.A. White, A.K. Buell, T.P.J. Knowles, M.E. Welland and C.M. Dobson, Protein aggregation in crowded environments, J Am Chem Soc , 2010, 132, 5170-5175
17. C. Lendel, B. Bolognesi, A. Wahlström, C.M. Dobson and A. Gräslund, Detergent-like interaction of Congo red with the amyloid beta peptide, Biochemistry , 2010, 49, 1358-1360
18. D.M. Walsh, E. Thulin, A.M. Minogue, N. Gustavsson, E. Pang, D.B Teplow and S. Linse, A facile method for expression and purifi cation of the Alzheimer's disease-associated amyloid beta-peptide, FEBS J 2009, 1266-1281
19. J. Ferkinghoff-Borg, J. Fonslet, C. Beyschau Andersen, S. Krishna, S. Pigolotti, H. Yagi, Y. Goto, D. Otzen, M.H. Jensen, Stop-and-go kinetics in amyloid fi brillation, Phys Rev E , 2010, 82, 010901
20. A.K. Buell, J.R. Blundell, C.M. Dobson, M.E. Welland, E.M. Terentjev and T.P.J. Knowles, Frequency Factors in a Landscape Model of Filamentous Protein Aggregation, Phys Rev Lett, 2010, 104, 228101