메뉴 건너뛰기




Volumn 194, Issue 6, 2012, Pages 473-482

Transcriptome analysis of pellicle formation of Shewanella oneidensis

Author keywords

Pellicle; Shewanella oneidensis; Type I secretion system

Indexed keywords

CARRIER PROTEIN; HEME; IRON; REGULATOR PROTEIN; TRANSCRIPTOME;

EID: 84864453433     PISSN: 03028933     EISSN: 1432072X     Source Type: Journal    
DOI: 10.1007/s00203-011-0782-x     Document Type: Article
Times cited : (9)

References (38)
  • 1
    • 0035350694 scopus 로고    scopus 로고
    • Shewanella putrefaciens Adhesion and Biofilm Formation on Food Processing Surfaces
    • DOI 10.1128/AEM.67.5.2319-2325.2001
    • Bagge D, Hjelm M, Johansen C, Huber I, Grami L (2001) Shewanella putrefaciens adhesion and bioWlm formation on food processing surfaces. Appl Environ Microbiol 67:2319-2325 (Pubitemid 33641423)
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.5 , pp. 2319-2325
    • Bagge, D.1    Hjelm, M.2    Johansen, C.3    Huber, I.4    Gram, L.5
  • 6
    • 2942575893 scopus 로고    scopus 로고
    • Genes involved in formation of structured multicellular communities by Bacillus subtilis
    • DOI 10.1128/JB.186.12.3970-3979.2004
    • Branda SS, Gonzalez-Pastor JE, Dervyn E, Ehrlich SD, Losick R, Kolter R (2004) Genes involved in formation of structured multicellular communities by Bacillus subtilis. J Bacteriol 186:3970-3979 (Pubitemid 38746073)
    • (2004) Journal of Bacteriology , vol.186 , Issue.12 , pp. 3970-3979
    • Branda, S.S.1    Gonzalez-Pastor, J.E.2    Dervyn, E.3    Ehrlich, S.D.4    Losick, R.5    Kolter, R.6
  • 7
    • 0036216270 scopus 로고    scopus 로고
    • Active transport of iron and siderophore antibiotics
    • DOI 10.1016/S1369-5274(02)00298-9
    • Braun V, Braun M (2002) Active transport of iron and siderophore antibiotics. Curr Opin Microbiol 5:194-201 (Pubitemid 34289928)
    • (2002) Current Opinion in Microbiology , vol.5 , Issue.2 , pp. 194-201
    • Braun, V.1    Braun, M.2
  • 8
    • 2942537016 scopus 로고    scopus 로고
    • Phosphorus limitation enhances biofilm formation of the plant pathogen Agrobacterium tumefaciens through the PhoR-PhoB regulatory system
    • DOI 10.1128/JB.186.14.4492-4501.2004
    • Danhorn T, Hentzer M, Givskov M, Parsek MR, Fuqua C (2004) Phosphorus limitation enhances bioWlm formation of the plant pathogen Agrobacterium tumefaciens through the PhoR-PhoB regulatory system. J Bacteriol 186:4492-4501 (Pubitemid 38891012)
    • (2004) Journal of Bacteriology , vol.186 , Issue.14 , pp. 4492-4501
    • Danhorn, T.1    Hentzer, M.2    Givskov, M.3    Parsek, M.R.4    Fuqua, C.5
  • 9
    • 14544306021 scopus 로고    scopus 로고
    • Genetic determinants of biofilm development of opaque and translucent Vibrio parahaemolyticus
    • DOI 10.1111/j.1365-2958.2004.04453.x
    • Enos-Berlage JL, Guvener ZT, Keenan CE, McCarter LL (2005) Genetic determinants of bioWlm development of opaque and translucent Vibrio parahaemolyticus. Mol Microbiol 55(4):1160-1182 (Pubitemid 40299185)
    • (2005) Molecular Microbiology , vol.55 , Issue.4 , pp. 1160-1182
    • Enos-Berlage, J.L.1    Guvener, Z.T.2    Keenan, C.E.3    McCarter, L.L.4
  • 11
    • 7744230895 scopus 로고    scopus 로고
    • Global transcriptome analysis of the heat shock response of Shewanella oneidensis
    • DOI 10.1128/JB.186.22.7796-7803.2004
    • Gao HC, Wang Y, Liu XD, Yan TF, Wu LY, Alm E, Arkin A, Thompson DK, Zhou JZ (2004) Global transcriptome analysis of the heat shock response of Shewanella oneidensis. J Bacteriol 186:7796-7803 (Pubitemid 39463746)
    • (2004) Journal of Bacteriology , vol.186 , Issue.22 , pp. 7796-7803
    • Gao, H.1    Wang, Y.2    Liu, X.3    Yan, T.4    Wu, L.5    Alm, E.6    Arkin, A.7    Thompson, D.K.8    Zhou, J.9
  • 12
    • 33745005291 scopus 로고    scopus 로고
    • Global transcriptome analysis of the cold shock response of Shewanella oneidensis MR-1 and mutational analysis of its classical cold shock proteins
    • DOI 10.1128/JB.01908-05
    • Gao H, Yang ZK, Wu L, Thompson DK, Zhou J (2006) Global transcriptome analysis of the cold shock response of Shewanella oneidensis MR-1 and mutational analysis of its classical cold shock proteins. J Bacteriol 188:4560-4569 (Pubitemid 43865775)
    • (2006) Journal of Bacteriology , vol.188 , Issue.12 , pp. 4560-4569
    • Gao, H.1    Yang, Z.K.2    Wu, L.3    Thompson, D.K.4    Zhou, J.5
  • 13
    • 40249116849 scopus 로고    scopus 로고
    • Probing regulon of ArcA in Shewanella oneidensis MR-I by integrated genomic analyses
    • Gao HC, Wang XH, Yang ZK, Palzkill T, Zhou JZ (2008) Probing regulon of ArcA in Shewanella oneidensis MR-I by integrated genomic analyses. Bmc Genomics 9 (Suppl 1):S11
    • (2008) Bmc Genomics , vol.9 , Issue.SUPPL. 1
    • Gao, H.C.1    Wang, X.H.2    Yang, Z.K.3    Palzkill, T.4    Zhou, J.Z.5
  • 14
    • 0041335448 scopus 로고    scopus 로고
    • Multiple regulators control capsular polysaccharide production in Vibrio parahaemolyticus
    • DOI 10.1128/JB.185.18.5431-5441.2003
    • Guvener ZT, McCarter LL (2003) Multiple regulators control capsular polysaccharide production in Vibrio parahaemolyticus. J Bacteriol 185(8):5431-5441 (Pubitemid 37082400)
    • (2003) Journal of Bacteriology , vol.185 , Issue.18 , pp. 5431-5441
    • Guvener, Z.T.1    McCarter, L.L.2
  • 16
    • 18844428872 scopus 로고    scopus 로고
    • Type 1 protein secretion in bacteria, the ABC-transporter dependent pathway
    • DOI 10.1080/09687860500042013
    • Holland IB, Schmitt L, Young J (2005) Type 1 protein secretion in bacteria, the ABC-transporter dependent pathway (review). Mol Membr Biol 22(1-2):29-39 (Pubitemid 40692152)
    • (2005) Molecular Membrane Biology , vol.22 , Issue.1-2 , pp. 29-39
    • Holland, I.B.1    Schmitt, L.2    Young, J.3
  • 17
    • 34347384634 scopus 로고    scopus 로고
    • Bacillus subtilis pellicle formation proceeds through genetically defined morphological changes
    • DOI 10.1128/JB.00157-07
    • Kobayashi K (2007) Bacillus subtilis pellicle formation proceeds through genetically deWned morphological changes. J Bacteriol 189:4920-4931 (Pubitemid 47025604)
    • (2007) Journal of Bacteriology , vol.189 , Issue.13 , pp. 4920-4931
    • Kobayashi, K.1
  • 19
    • 32644432879 scopus 로고    scopus 로고
    • Bap: A family of surface proteins involved in biofilm formation
    • DOI 10.1016/j.resmic.2005.11.003, PII S092325080500272X
    • Lasa I, Penades JR (2006) Bap: a family of surface proteins involved in bioWlm formation. Res Microbiol 157(2):99-107 (Pubitemid 43243686)
    • (2006) Research in Microbiology , vol.157 , Issue.2 , pp. 99-107
    • Lasa, I.1    Penades, J.R.2
  • 20
    • 0035135976 scopus 로고    scopus 로고
    • Natural genetic transformation of streptococcus mutans growing in biofilms
    • DOI 10.1128/JB.183.3.897-908.2001
    • Li YH, Lau PCY, Lee JH, Ellen RP, Cvitkovitch DG (2001) Natural genetic transformation of Streptococcus mutants growing in bio-Wlms. J Bacteriol 183:897-908 (Pubitemid 32097974)
    • (2001) Journal of Bacteriology , vol.183 , Issue.3 , pp. 897-908
    • Li, Y.-H.1    Lau, P.C.Y.2    Lee, J.H.3    Ellen, R.P.4    Cvitkovitch, D.G.5
  • 22
    • 78650992939 scopus 로고    scopus 로고
    • FLO11 is essential for pellicle formation by wild pellicle-forming yeasts isolated from contaminated wines
    • Nakagawa Y, Toda Y, Yamamura H, Hayakawa M, Iimura Y (2011) FLO11 is essential for pellicle formation by wild pellicle-forming yeasts isolated from contaminated wines. J Biosci Bioeng 111(1):7-9
    • (2011) J Biosci Bioeng , vol.111 , Issue.1 , pp. 7-9
    • Nakagawa, Y.1    Toda, Y.2    Yamamura, H.3    Hayakawa, M.4    Iimura, Y.5
  • 23
    • 0345714688 scopus 로고    scopus 로고
    • Comparative Analysis of Salmonella enterica Serovar Typhimurium Biofilm Formation on Gallstones and on Glass
    • DOI 10.1128/IAI.71.12.7154-7158.2003
    • Prouty AM, Gunn JS (2003) Comparative analysis of Salmonella enterica serovar typhimurium bioWlm formation on gallstones and on glass. Infect Immun 71:7154-7158 (Pubitemid 37475348)
    • (2003) Infection and Immunity , vol.71 , Issue.12 , pp. 7154-7158
    • Prouty, A.M.1    Gunn, J.S.2
  • 24
    • 0035065972 scopus 로고    scopus 로고
    • An inner membrane platform in the type II secretion machinery of Gram-negative bacteria
    • DOI 10.1093/embo-reports/kve042
    • Py B, Loiseau L, Barras F (2001) An inner membrane platform in the type II secretion machinery of Gram-negative bacteria. Embo Reports 2(3):244-248 (Pubitemid 32273305)
    • (2001) EMBO Reports , vol.2 , Issue.3 , pp. 244-248
    • Py, B.1    Loiseau, L.2    Barras, F.3
  • 25
    • 2342437319 scopus 로고    scopus 로고
    • Gene Expression in Bacillus subtilis Surface Biofilms with and Without Sporulation and the Importance of yveR for Biofilm Maintenance
    • DOI 10.1002/bit.20053
    • Ren D, Bedzyk LA, Setlow P, Thomas SM, Ye RW, Wood TK (2004) Gene expression in Bacillus subtilis surface bioWlms with and without sporulation and the importance of yveR for bioWlm maintenance. Biotechnol Bioeng 86:344-364 (Pubitemid 38560362)
    • (2004) Biotechnology and Bioengineering , vol.86 , Issue.3 , pp. 344-364
    • Ren, D.1    Bedzyk, L.A.2    Setlow, P.3    Thomas, S.M.4    Ye, R.W.5    Wood, T.K.6
  • 26
    • 34249056525 scopus 로고    scopus 로고
    • Iron acquisition in the dental pathogen Actinobacillus actinomycetemcomitans: What does it use as a source and how does it get this essential metal?
    • DOI 10.1007/s10534-006-9058-3, Biometals: function and transport in bacteria, fungi, and humans
    • Rhodes ER, Menke S, Shoemaker C, Tomaras AP, McGillivary G, Actis LA (2007) Iron acquisition in the dental pathogen Actinobacillus actinomycetemcomitans: what does it use as a source and how does it get this essential metal? Biometals 20:365-377 (Pubitemid 46778683)
    • (2007) BioMetals , vol.20 , Issue.3-4 , pp. 365-377
    • Rhodes, E.R.1    Menke, S.2    Shoemaker, C.3    Tomaras, A.P.4    McGillivary, G.5    Actis, L.A.6
  • 27
    • 34250639301 scopus 로고    scopus 로고
    • Respiration of metal (hydr)oxides by Shewanella and Geobacter: A key role for multihaem c-type cytochromes
    • DOI 10.1111/j.1365-2958.2007.05783.x
    • Shi L, Squier TC, Zachara JM, Fredrickson JK (2007) Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c-type cytochromes. Mol Microbiol 65(1):12-20 (Pubitemid 46934494)
    • (2007) Molecular Microbiology , vol.65 , Issue.1 , pp. 12-20
    • Shi, L.1    Squier, T.C.2    Zachara, J.M.3    Fredrickson, J.K.4
  • 28
    • 0036270804 scopus 로고    scopus 로고
    • Genetic analysis of Salmonella enteritidis biofilm formation: Critical role of cellulose
    • DOI 10.1046/j.1365-2958.2002.02802.x
    • Solano C, Garcia B, Valle J, Berasain C, Ghigo JM, Gamazo C, Lasa I (2002) Genetic analysis of Salmonella enteritidis bioWlm formation: critical role of cellulose. Mol Microbiol 43:793-808 (Pubitemid 34597271)
    • (2002) Molecular Microbiology , vol.43 , Issue.3 , pp. 793-808
    • Solano, C.1    Garcia, B.2    Valle, J.3    Berasain, C.4    Ghigo, J.-M.5    Gamazo, C.6    Lasa, I.7
  • 29
    • 0141484352 scopus 로고    scopus 로고
    • Biofilm formation at the air-liquid interface by the Pseudomonas fluorescens SBW25 wrinkly spreader requires an acetylated form of cellulose
    • DOI 10.1046/j.1365-2958.2003.03670.x
    • Spiers AJ, Bohannon J, Gehrig SM, Rainey PB (2003) BioWlm formation at the air-liquid interface by the Pseudomonas Xuorescens SBW25 wrinkly spreader requires an acetylated form of cellulose. Mol Microbiol 50:15-27 (Pubitemid 37222783)
    • (2003) Molecular Microbiology , vol.50 , Issue.1 , pp. 15-27
    • Spiers, A.J.1    Bohannon, J.2    Gehrig, S.M.3    Rainey, P.B.4
  • 30
    • 39149100341 scopus 로고    scopus 로고
    • Physiological heterogeneity in bio-Wlms
    • Stewart PS, Franklin MJ (2008) Physiological heterogeneity in bio-Wlms. Nat Rev Microbiol 6:199-210
    • (2008) Nat Rev Microbiol , vol.6 , pp. 199-210
    • Stewart, P.S.1    Franklin, M.J.2
  • 34
    • 13244255243 scopus 로고    scopus 로고
    • Induction of rapid detachment in Shewanella oneidensis MR-1 biofilms
    • DOI 10.1128/JB.187.3.1014-1021.2005
    • Thormann KM, Saville RM, Shukla S, Spormann AM (2005) Induction of rapid detachment in Shewanella oneidensis MR-1 bio-Wlms. J Bacteriol 187:1014-1021 (Pubitemid 40189775)
    • (2005) Journal of Bacteriology , vol.187 , Issue.3 , pp. 1014-1021
    • Thormann, K.M.1    Saville, R.M.2    Shukla, S.3    Spormann, A.M.4
  • 35
    • 17044362306 scopus 로고    scopus 로고
    • Proteomics of Shewanella oneidensis MR-1 bio-Wlm reveals diVerentially expressed proteins, including AggA and RibB
    • Vriendt D, Theunissen KS, Carpentier W, Smet LD, Devreese B, Beeumen JV (2005) Proteomics of Shewanella oneidensis MR-1 bio-Wlm reveals diVerentially expressed proteins, including AggA and RibB. Proteomics 5:1308-1316
    • (2005) Proteomics , vol.5 , pp. 1308-1316
    • Vriendt, D.1    Theunissen, K.S.2    Carpentier, W.3    Smet, L.D.4    Devreese, B.5    Beeumen, J.V.6
  • 36
    • 0037154837 scopus 로고    scopus 로고
    • Extracellular DNA required for bacterial biofilm formation
    • DOI 10.1126/science.295.5559.1487
    • Whitchurch CB, Tolker-Nielsen T, Ragas PC, Mattick JS (2002) Extracellular DNA required for bacterial bioWlm formation. Science 295:1487 (Pubitemid 34173996)
    • (2002) Science , vol.295 , Issue.5559 , pp. 1487
    • Whitchurch, C.B.1    Tolker-Nielsen, T.2    Ragas, P.C.3    Mattick, J.S.4
  • 37
    • 33645096137 scopus 로고    scopus 로고
    • AggA is required for aggregation and increased bioWlm formation of a hyper-aggregating mutant of Shewanella oneidensis MR-1
    • Windt DW, Gao HC, Kromer W, Van Damme P, Dick J, Mast J, Boon N, Zhou JZ, Verstraete W (2006) AggA is required for aggregation and increased bioWlm formation of a hyper-aggregating mutant of Shewanella oneidensis MR-1. Microbiology 152:721-729
    • (2006) Microbiology , vol.152 , pp. 721-729
    • Windt, D.W.1    Gao, H.C.2    Kromer, W.3    Van Damme, P.4    Dick, J.5    Mast, J.6    Boon, N.7    Zhou, J.Z.8    Verstraete, W.9
  • 38
    • 79960835583 scopus 로고    scopus 로고
    • Trade-oV between oxygen and iron acquisition in bacterial cells at the air-liquid interface
    • Yamamoto K, Arai H, Ishii M, Igarashi Y (2011) Trade-oV between oxygen and iron acquisition in bacterial cells at the air-liquid interface. FEMS Microbiol Ecol 77(1):83-94
    • (2011) FEMS Microbiol Ecol , vol.77 , Issue.1 , pp. 83-94
    • Yamamoto, K.1    Arai, H.2    Ishii, M.3    Igarashi, Y.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.