-
1
-
-
0036798006
-
Signals and their transduction pathways regulating alternative splicing: A new dimension of the human genome
-
Stamm, S. (2002) Signals and their transduction pathways regulating alternative splicing: a new dimension of the human genome. Hum. Mol. Genet. 11, 2409-2416
-
(2002)
Hum. Mol. Genet.
, vol.11
, pp. 2409-2416
-
-
Stamm, S.1
-
3
-
-
58249093940
-
The SR protein family of splicing factors: Master regulators of gene expression
-
Long, J.C. and Caceres, J.F. (2009) The SR protein family of splicing factors: master regulators of gene expression. Biochem. J. 417, 15-27
-
(2009)
Biochem. J.
, vol.417
, pp. 15-27
-
-
Long, J.C.1
Caceres, J.F.2
-
4
-
-
0031010564
-
Molecular cloning of htra2-beta-1 and htra2-beta-2, two human homologs of tra-2 generated by alternative splicing
-
Beil, B., Screaton, G. and Stamm, S. (1997) Molecular cloning of htra2-β-1 and htra2-β-2, two human homologs of tra-2 generated by alternative splicing. DNA Cell Biol. 16, 679-690 (Pubitemid 27276832)
-
(1997)
DNA and Cell Biology
, vol.16
, Issue.6
, pp. 679-690
-
-
Beil, B.1
-
5
-
-
0029831071
-
A human homologue of the Drosophila sex determination factor transformer-2 has conserved splicing regulatory functions
-
DOI 10.1073/pnas.93.17.9004
-
Dauwalder, B., Amaya-Manzanares, F. and Mattox, W. (1996) A human homologue of the Drosophila sex determination factor transformer-2 has conserved splicing regulatory functions. Proc. Natl. Acad. Sci. U.S.A. 93, 9004-9009 (Pubitemid 26282008)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.17
, pp. 9004-9009
-
-
Dauwalder, B.1
Amaya-Manzanares, F.2
Mattox, W.3
-
6
-
-
0024328766
-
Sex in flies: The splice of life
-
Baker, B.S. (1989) Sex in flies: the splice of life. Nature 340, 521-524
-
(1989)
Nature
, vol.340
, pp. 521-524
-
-
Baker, B.S.1
-
7
-
-
0025815671
-
Control of doublesex alternative splicing by transformer and transformer-2 in Drosophila
-
Hoshijima, K., Inoue, K., Higuchi, I., Sakamoto, H. and Shimura, Y. (1991) Control of doublesex alternative splicing by transformer and transformer-2 in Drosophila. Science 252, 833-836 (Pubitemid 121000522)
-
(1991)
Science
, vol.252
, Issue.5007
, pp. 833-836
-
-
Hoshijima, K.1
Inoue, K.2
Higuchi, I.3
Sakamoto, H.4
Shimura, Y.5
-
8
-
-
0020709779
-
The dual functions of a sex determination gene in Drosophila melanogaster
-
Belote, J.M. and Baker, B.S. (1983) The dual functions of a sex determination gene in Drosophila melanogaster. Dev. Biol. 95, 512-517
-
(1983)
Dev. Biol.
, vol.95
, pp. 512-517
-
-
Belote, J.M.1
Baker, B.S.2
-
9
-
-
80054087689
-
Molecular design of a splicing switch responsive to the RNA binding protein Tra2β
-
Grellscheid, S.N., Dalgliesh, C., Rozanska, A., Grellscheid, D., Bourgeois, C.F., Ste′venin, J. and Elliott, D.J. (2011) Molecular design of a splicing switch responsive to the RNA binding protein Tra2β. Nucleic Acids Res. 39, 8092-8104
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 8092-8104
-
-
Grellscheid, S.N.1
Dalgliesh, C.2
Rozanska, A.3
Grellscheid, D.4
Bourgeois, C.F.5
Stevenin, J.6
Elliott, D.J.7
-
10
-
-
26444575502
-
Up-regulation of the ubiquitous alternative splicing factor Tra2β causes inclusion of a germ cell-specific exon
-
DOI 10.1093/hmg/ddi233
-
Venables, J.P., Bourgeois, C.F., Dalgliesh, C., Kister, L., Stevenin, J. and Elliott, D.J. (2005) Up-regulation of the ubiquitous alternative splicing factor Tra2β causes inclusion of a germ cell-specific exon. Hum. Mol. Genet. 14, 2289-2303 (Pubitemid 41417993)
-
(2005)
Human Molecular Genetics
, vol.14
, Issue.16
, pp. 2289-2303
-
-
Venables, J.P.1
Bourgeois, C.F.2
Dalgliesh, C.3
Kister, L.4
Stevenin, J.5
Elliott, D.J.6
-
11
-
-
79952324952
-
Structural basis for the dual RNA-recognition modes of human Tra2β RRM
-
Tsuda, K., Someya, T., Kuwasako, K., Takahashi, M., He, F., Unzai, S., Inoue, M., Harada, T., Watanabe, S., Terada, T. et al. (2011) Structural basis for the dual RNA-recognition modes of human Tra2β RRM. Nucleic Acids Res. 39, 1538-1553
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1538-1553
-
-
Tsuda, K.1
Someya, T.2
Kuwasako, K.3
Takahashi, M.4
He, F.5
Unzai, S.6
Inoue, M.7
Harada, T.8
Watanabe, S.9
Terada, T.10
-
12
-
-
79953805056
-
Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1
-
Clery, A., Jayne, S., Benderska, N., Dominguez, C., Stamm, S. and Allain, F.H. (2011) Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1. Nat. Struct. Mol. Biol. 18, 443-450
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 443-450
-
-
Clery, A.1
Jayne, S.2
Benderska, N.3
Dominguez, C.4
Stamm, S.5
Allain, F.H.6
-
13
-
-
0032478506
-
Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing
-
DOI 10.1016/S0092-8674(00)81153-8
-
Tacke, R., Tohyama, M., Ogawa, S. and Manley, J.L. (1998) Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing. Cell 93, 139-148 (Pubitemid 28173559)
-
(1998)
Cell
, vol.93
, Issue.1
, pp. 139-148
-
-
Tacke, R.1
Tohyama, M.2
Ogawa, S.3
Manley, J.L.4
-
14
-
-
77953519937
-
Deficiency of the splicing factor Sfrs10 results in early embryonic lethality in mice and has no impact on full-length SMN/Smn splicing
-
Mende, Y., Jakubik, M., Riessland, M., Schoenen, F., Rossbach, K., Kleinridders, A., Köhler, C., Buch, T. and Wirth, B. (2010) Deficiency of the splicing factor Sfrs10 results in early embryonic lethality in mice and has no impact on full-length SMN/Smn splicing. Hum. Mol. Genet. 19, 2154-2167
-
(2010)
Hum. Mol. Genet.
, vol.19
, pp. 2154-2167
-
-
Mende, Y.1
Jakubik, M.2
Riessland, M.3
Schoenen, F.4
Rossbach, K.5
Kleinridders, A.6
Köhler, C.7
Buch, T.8
Wirth, B.9
-
15
-
-
84855281890
-
Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2β in development
-
Grellscheid, S., Dalgliesh, C., Storbeck, M., Best, A., Liu, Y., Jakubik, M., Mende, Y., Ehrmann, I., Curk, T., Rossbach, K. et al. (2011) Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2β in development. PLoS Genet. 7, e1002390
-
(2011)
PLoS Genet.
, vol.7
-
-
Grellscheid, S.1
Dalgliesh, C.2
Storbeck, M.3
Best, A.4
Liu, Y.5
Jakubik, M.6
Mende, Y.7
Ehrmann, I.8
Curk, T.9
Rossbach, K.10
-
16
-
-
41149151929
-
SnapShot: The splicing regulatory machinery
-
Gabut, M., Chaudhry, S. and Blencowe, B.J. (2008) SnapShot: the splicing regulatory machinery. Cell 133, 192.e1
-
(2008)
Cell
, vol.133
-
-
Gabut, M.1
Chaudhry, S.2
Blencowe, B.J.3
-
17
-
-
56549105330
-
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
-
DOI 10.1038/nature07488, PII NATURE07488
-
Licatalosi, D.D., Mele, A., Fak, J.J., Ule, J., Kayikci, M., Chi, S.W., Clark, T.A., Schweitzer, A.C., Blume, J.E., Wang, X. et al. (2008) HITS-CLIP yields genome-wide insights into brain alternative RNA processing. Nature 456, 464-469 (Pubitemid 352759008)
-
(2008)
Nature
, vol.456
, Issue.7221
, pp. 464-469
-
-
Licatalosi, D.D.1
Mele, A.2
Fak, J.J.3
Ule, J.4
Kayikci, M.5
Chi, S.W.6
Clark, T.A.7
Schweitzer, A.C.8
Blume, J.E.9
Wang, X.10
Darnell, J.C.11
Darnell, R.B.12
-
18
-
-
33746342798
-
Nuclear autoantigenic sperm protein (NASP), a linker histone chaperone that is required for cell proliferation
-
DOI 10.1074/jbc.M603816200
-
Richardson, R.T., Alekseev, O.M., Grossman, G., Widgren, E.E., Thresher, R., Wagner, E.J., Sullivan, K.D., Marzluff, W.F. and O'Rand, M.G. (2006) Nuclear autoantigenic sperm protein (NASP), a linker histone chaperone that is required for cell proliferation. J. Biol. Chem. 281, 21526-21534 (Pubitemid 44115489)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.30
, pp. 21526-21534
-
-
Richardson, R.T.1
Alekseev, O.M.2
Grossman, G.3
Widgren, E.E.4
Thresher, R.5
Wagner, E.J.6
Sullivan, K.D.7
Marzluff, W.F.8
O'Rand, M.G.9
-
19
-
-
78651320424
-
The UCSC genome browser database: Update 2011
-
Fujita, P.A., Rhead, B., Zweig, A.S., Hinrichs, A.S., Karolchik, D., Cline, M.S., Goldman, M., Barber, G.P., Clawson, H., Coelho, A. et al. (2011) The UCSC genome browser database: update 2011. Nucleic Acids Res. 39, D876-D882
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Fujita, P.A.1
Rhead, B.2
Zweig, A.S.3
Hinrichs, A.S.4
Karolchik, D.5
Cline, M.S.6
Goldman, M.7
Barber, G.P.8
Clawson, H.9
Coelho, A.10
-
20
-
-
74049152341
-
Linker histones stimulate HSPA2 ATPase activity through NASP binding and inhibit CDC2/cyclin B1 complex formation during meiosis in the mouse
-
Alekseev, O.M., Richardson, R.T. and O'Rand, M.G. (2009) Linker histones stimulate HSPA2 ATPase activity through NASP binding and inhibit CDC2/cyclin B1 complex formation during meiosis in the mouse. Biol. Reprod. 81, 739-748
-
(2009)
Biol. Reprod.
, vol.81
, pp. 739-748
-
-
Alekseev, O.M.1
Richardson, R.T.2
O'Rand, M.G.3
-
21
-
-
77951210221
-
Nucleosome formation activity of human somatic nuclear autoantigenic sperm protein (sNASP)
-
Osakabe, A., Tachiwana, H., Matsunaga, T., Shiga, T., Nozawa, R.S., Obuse, C. and Kurumizaka, H. (2010) Nucleosome formation activity of human somatic nuclear autoantigenic sperm protein (sNASP). J. Biol. Chem. 285, 11913-11921
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 11913-11921
-
-
Osakabe, A.1
Tachiwana, H.2
Matsunaga, T.3
Shiga, T.4
Nozawa, R.S.5
Obuse, C.6
Kurumizaka, H.7
-
22
-
-
0034730502
-
Characterization of the histone H1-binding protein, NASP, as a cell cycle-regulated somatic protein
-
Richardson, R.T., Batova, I.N., Widgren, E.E., Zheng, L.X., Whitfield, M., Marzluff, W.F. and O'Rand, M.G. (2000) Characterization of the histone H1-binding protein, NASP, as a cell cycle-regulated somatic protein. J. Biol. Chem. 275, 30378-30386
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 30378-30386
-
-
Richardson, R.T.1
Batova, I.N.2
Widgren, E.E.3
Zheng, L.X.4
Whitfield, M.5
Marzluff, W.F.6
O'Rand, M.G.7
-
23
-
-
34247330971
-
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
-
DOI 10.1038/nature05676, PII NATURE05676
-
Lareau, L.F., Inada, M., Green, R.E., Wengrod, J.C. and Brenner, S.E. (2007) Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements. Nature 446, 926-929 (Pubitemid 46633161)
-
(2007)
Nature
, vol.446
, Issue.7138
, pp. 926-929
-
-
Lareau, L.F.1
Inada, M.2
Green, R.E.3
Wengrod, J.C.4
Brenner, S.E.5
-
24
-
-
26944484831
-
Evolutionarily conserved and diverged alternative splicing events show different expression and functional profiles
-
DOI 10.1093/nar/gki834
-
Kan, Z., Garrett-Engele, P.W., Johnson, J.M. and Castle, J.C. (2005) Evolutionarily conserved and diverged alternative splicing events show different expression and functional profiles. Nucleic Acids Res. 33, 5659-5666 (Pubitemid 41548832)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.17
, pp. 5659-5666
-
-
Kan, Z.1
Garrett-Engele, P.W.2
Johnson, J.M.3
Castle, J.C.4
-
25
-
-
2942546059
-
The evolving roles of alternative splicing
-
DOI 10.1016/j.sbi.2004.05.002, PII S0959440X04000764
-
Lareau, L.F., Green, R.E., Bhatnagar, R.S. and Brenner, S.E. (2004) The evolving roles of alternative splicing. Curr. Opin. Struct. Biol. 14, 273-282 (Pubitemid 38749054)
-
(2004)
Current Opinion in Structural Biology
, vol.14
, Issue.3
, pp. 273-282
-
-
Lareau, L.F.1
Green, R.E.2
Bhatnagar, R.S.3
Brenner, S.E.4
-
26
-
-
1642473041
-
How prevalent is functional alternative splicing in the human genome?
-
DOI 10.1016/j.tig.2003.12.004
-
Sorek, R., Shamir., R and Ast, G. (2004) How prevalent is functional alternative splicing in the human genome? Trends Genet. 20, 68-71 (Pubitemid 38121356)
-
(2004)
Trends in Genetics
, vol.20
, Issue.2
, pp. 68-71
-
-
Sorek, R.1
Shamir, R.2
Ast, G.3
-
27
-
-
14544277546
-
Identification and analysis of alternative splicing events conserved in human and mouse
-
DOI 10.1073/pnas.0409742102
-
Yeo, G.W., Van Nostrand, E., Holste, D., Poggio, T. and Burge, C.B. (2005) Identification and analysis of alternative splicing events conserved in human and mouse. Proc. Natl. Acad. Sci. U.S.A. 102, 2850-2855 (Pubitemid 40299880)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.8
, pp. 2850-2855
-
-
Yeo, G.W.1
Van Nostrand, E.2
Holste, D.3
Poggio, T.4
Burge, C.B.5
-
28
-
-
77951120000
-
Alternative splicing and evolution, diversification, exon definition and function
-
Keren, H., Lev-Maor, G. and Ast, G. (2010) Alternative splicing and evolution, diversification, exon definition and function. Nat. Rev. Genet. 11, 345-355
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 345-355
-
-
Keren, H.1
Lev-Maor, G.2
Ast, G.3
-
29
-
-
1542359466
-
Human tra2-beta1 autoregulates its protein concentration by infuencing alternative splicing of its pre-mRNA
-
DOI 10.1093/hmg/ddh051
-
Stoilov, P., Daoud, R., Nayler, O. and Stamm, S. (2004) Human tra2-β1 autoregulates its protein concentration by influencing alternative splicing of its pre-mRNA. Hum. Mol. Genet. 13, 509-524 (Pubitemid 38313210)
-
(2004)
Human Molecular Genetics
, vol.13
, Issue.5
, pp. 509-524
-
-
Stoilov, P.1
Dauod, R.2
Nayler, O.3
Stamm, S.4
-
30
-
-
0034256020
-
Alternative pre-mRNA splicing: The logic of combinatorial control
-
DOI 10.1016/S0968-0004(00)01604-2, PII S0968000400016042
-
Smith, C.W. and Valcarcel, J. (2000) Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem. Sci. 25, 381-388 (Pubitemid 30497249)
-
(2000)
Trends in Biochemical Sciences
, vol.25
, Issue.8
, pp. 381-388
-
-
Smith, C.W.J.1
Valcarcel, J.2
-
31
-
-
0028881190
-
Cell type-specific expression of hnRNP proteins
-
Kamma, H., Portman, D.S. and Dreyfuss, G. (1995) Cell type-specific expression of hnRNP proteins. Exp. Cell Res. 221, 187-196
-
(1995)
Exp. Cell Res.
, vol.221
, pp. 187-196
-
-
Kamma, H.1
Portman, D.S.2
Dreyfuss, G.3
-
32
-
-
0034662922
-
Htra2-β1 stimulates an exonic splicing enhancer and can restore full-length SMN expression to survival motor neuron 2 (SMN2)
-
Hofmann, Y., Lorson, C.L., Stamm, S., Androphy, E.J. and Wirth, B. (2000) Htra2-β1 stimulates an exonic splicing enhancer and can restore full-length SMN expression to survival motor neuron 2 (SMN2). Proc. Natl. Acad. Sci. U.S.A. 97, 9618-9623 (Pubitemid 30650825)
-
(2000)
Proceedings of the National Academy of Sciences of the United States of America
, vol.97
, Issue.17
, pp. 9618-9623
-
-
Hofmann, Y.1
Lorson, C.L.2
Stamm, S.3
Androphy, E.J.4
Wirth, B.5
-
33
-
-
33646426385
-
Splicing factor Tra2-β1 is specifically induced in breast cancer and regulates alternative splicing of the CD44 gene
-
Watermann, D.O., Tang, Y., Zur Hausen, A., Jager, M., Stamm, S. and Stickeler, E. (2006) Splicing factor Tra2-β1 is specifically induced in breast cancer and regulates alternative splicing of the CD44 gene. Cancer Res. 66, 4774-4780
-
(2006)
Cancer Res.
, vol.66
, pp. 4774-4780
-
-
Watermann, D.O.1
Tang, Y.2
Zur Hausen, A.3
Jager, M.4
Stamm, S.5
Stickeler, E.6
|