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Volumn 63, Issue 4, 2012, Pages 773-786

Estimating Biodiversity of Fungi in Activated Sludge Communities Using Culture-Independent Methods

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL DNA; RNA 18S;

EID: 84864363136     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-011-9984-7     Document Type: Article
Times cited : (51)

References (72)
  • 2
    • 3543138422 scopus 로고    scopus 로고
    • Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques
    • Anderson IC, Cairney JWG (2004) Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques. Environ Microbiol 6: 769-779.
    • (2004) Environ Microbiol , vol.6 , pp. 769-779
    • Anderson, I.C.1    Cairney, J.W.G.2
  • 3
    • 0037224886 scopus 로고    scopus 로고
    • Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil
    • Anderson IC, Campbell CD, Prosser JI (2003) Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil. Environ Microbiol 5: 36-47.
    • (2003) Environ Microbiol , vol.5 , pp. 36-47
    • Anderson, I.C.1    Campbell, C.D.2    Prosser, J.I.3
  • 4
    • 42149110897 scopus 로고    scopus 로고
    • Degradation of cellulose by basidiomycetous fungi
    • Baldrian P, Valášková V (2007) Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol Rev 32: 501-521.
    • (2007) FEMS Microbiol Rev , vol.32 , pp. 501-521
    • Baldrian, P.1    Valášková, V.2
  • 5
    • 77954886296 scopus 로고    scopus 로고
    • Molecular approaches promise a deeper and broader understanding of the evolutionary ecology of aquatic hyphomycetes
    • Bärlocher F (2010) Molecular approaches promise a deeper and broader understanding of the evolutionary ecology of aquatic hyphomycetes. J N Am Benthol Soc 29: 1027-1041.
    • (2010) J N Am Benthol Soc , vol.29 , pp. 1027-1041
    • Bärlocher, F.1
  • 7
    • 3242711100 scopus 로고    scopus 로고
    • How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys
    • Berney, C, Fahrni, J, Pawlowski, J (2004) How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys. BMC Biol 2.
    • (2004) BMC Biol , pp. 2
    • Berney, C.1    Fahrni, J.2    Pawlowski, J.3
  • 8
    • 71149087337 scopus 로고    scopus 로고
    • Identification of fungi associated with municipal compost using DNA-based techniques
    • Bonito G, Isikhuemhen OS, Vilgalys R (2010) Identification of fungi associated with municipal compost using DNA-based techniques. Bioresour Technol 101: 1021-1027.
    • (2010) Bioresour Technol , vol.101 , pp. 1021-1027
    • Bonito, G.1    Isikhuemhen, O.S.2    Vilgalys, R.3
  • 9
    • 85012621860 scopus 로고
    • Introduction to general methods
    • C. Booth (Ed.), London: Academic
    • Booth C (1971) Introduction to general methods. In: Booth C (ed) Methods in microbiology, vol 4. Academic, London, pp 34-35.
    • (1971) Methods in Microbiology , vol.4 , pp. 34-35
    • Booth, C.1
  • 10
    • 0033771173 scopus 로고    scopus 로고
    • PCR primers that amplify fungal rRNA genes from environmental samples
    • Borneman J, Hartin RJ (2000) PCR primers that amplify fungal rRNA genes from environmental samples. Appl Environ Microbiol 66: 4356-4360.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4356-4360
    • Borneman, J.1    Hartin, R.J.2
  • 12
    • 0035561277 scopus 로고    scopus 로고
    • Use of silicone grease to avoid 'smiling effect' in denaturing gradient gel electrophoresis
    • Brinkhoff T, van Hannen EJ (2001) Use of silicone grease to avoid 'smiling effect' in denaturing gradient gel electrophoresis. J Rapid Methods Automat Micro 9: 259-261.
    • (2001) J Rapid Methods Automat Micro , vol.9 , pp. 259-261
    • Brinkhoff, T.1    van Hannen, E.J.2
  • 13
    • 0037770278 scopus 로고    scopus 로고
    • Soil fungal community structure in a temperature upland grassland soil
    • Brodie E, Edwards S, Clipson N (2003) Soil fungal community structure in a temperature upland grassland soil. FEMS Microbiol Ecol 45: 105-114.
    • (2003) FEMS Microbiol Ecol , vol.45 , pp. 105-114
    • Brodie, E.1    Edwards, S.2    Clipson, N.3
  • 15
    • 17044371889 scopus 로고
    • Predacious fungus behavior in activated sludge systems
    • Cooke WB, Ludzack FJ (1958) Predacious fungus behavior in activated sludge systems. Sewage and Industrial Wastes 30: 1490-1495.
    • (1958) Sewage and Industrial Wastes , vol.30 , pp. 1490-1495
    • Cooke, W.B.1    Ludzack, F.J.2
  • 16
    • 0014969682 scopus 로고
    • The occurrence of fungi in activated sludge
    • Cooke WB, Pipes WO (1969) The occurrence of fungi in activated sludge. Mycopathologia 40: 249-270.
    • (1969) Mycopathologia , vol.40 , pp. 249-270
    • Cooke, W.B.1    Pipes, W.O.2
  • 17
    • 74249105467 scopus 로고
    • Fungi associated with the activated-sludge process of sewage treatment at the Lebanon, Ohio, sewage-treatment plant
    • Cooke WB (1970) Fungi associated with the activated-sludge process of sewage treatment at the Lebanon, Ohio, sewage-treatment plant. Ohio J Sci 70: 129-146.
    • (1970) Ohio J Sci , vol.70 , pp. 129-146
    • Cooke, W.B.1
  • 19
    • 0037062470 scopus 로고    scopus 로고
    • Novel kingdom-level eukaryotic diversity in anoxic environments
    • Dawson SC, Pace NR (2002) Novel kingdom-level eukaryotic diversity in anoxic environments. PNAS 99: 8324-8329.
    • (2002) Pnas , vol.99 , pp. 8324-8329
    • Dawson, S.C.1    Pace, N.R.2
  • 20
    • 5344253948 scopus 로고    scopus 로고
    • Impact of DNA extraction method on bacterial community composition measured by denaturing gradient gel electrophoresis
    • de Lipthay JR, Enzinger C, Johnsen K, Aamand J, Sørensen SJ (2004) Impact of DNA extraction method on bacterial community composition measured by denaturing gradient gel electrophoresis. Soil Biol Biochem 36: 1607-1614.
    • (2004) Soil Biol Biochem , vol.36 , pp. 1607-1614
    • de Lipthay, J.R.1    Enzinger, C.2    Johnsen, K.3    Aamand, J.4    Sørensen, S.J.5
  • 27
    • 54449086625 scopus 로고    scopus 로고
    • Molecular detection of fungal communities in the Hawaiian marine sponges Suberites zeteki and Mycale armata
    • Gao Z, Li B, Zheng C, Wang G (2008) Molecular detection of fungal communities in the Hawaiian marine sponges Suberites zeteki and Mycale armata. Appl Environ Microbiol 74: 6091-6101.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 6091-6101
    • Gao, Z.1    Li, B.2    Zheng, C.3    Wang, G.4
  • 28
    • 84982358244 scopus 로고
    • The effect of fungal parasitism and predation on the population dynamics of nematodes in the activated sludge process
    • Gray NF (1984) The effect of fungal parasitism and predation on the population dynamics of nematodes in the activated sludge process. Ann Appl Biol 104: 143-149.
    • (1984) Ann Appl Biol , vol.104 , pp. 143-149
    • Gray, N.F.1
  • 29
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA and rRNA-based microbial community composition
    • Griffiths RI, Whiteley AS, O'Donnell AG, Bailey MJ (2000) Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA and rRNA-based microbial community composition. Appl Environ Microbiol 66: 5488-5491.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.S.2    O'Donnell, A.G.3    Bailey, M.J.4
  • 30
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O (2003) A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 32
    • 11144310730 scopus 로고    scopus 로고
    • Molecular characterization of fungal community dynamics in the initial stages of composting
    • Hansgate AM, Schloss PD, Hay AG, Walker LP (2005) Molecular characterization of fungal community dynamics in the initial stages of composting. FEMS Microbiol Ecol 51: 209-214.
    • (2005) FEMS Microbiol Ecol , vol.51 , pp. 209-214
    • Hansgate, A.M.1    Schloss, P.D.2    Hay, A.G.3    Walker, L.P.4
  • 33
    • 78650050818 scopus 로고    scopus 로고
    • Soil clone library analyses to evaluate specificity and selectivity of PCR primers targeting fungal 18S rDNA for denaturing-gradient gel electrophoresis (DGGE)
    • Hoshino YT, Matsumoto S (2010) Soil clone library analyses to evaluate specificity and selectivity of PCR primers targeting fungal 18S rDNA for denaturing-gradient gel electrophoresis (DGGE). Microbes Environ 25: 281-287.
    • (2010) Microbes Environ , vol.25 , pp. 281-287
    • Hoshino, Y.T.1    Matsumoto, S.2
  • 34
    • 5044240973 scopus 로고    scopus 로고
    • Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
    • Huber T, Faulkner G, Hugenholtz P (2004) Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20: 2317-2319.
    • (2004) Bioinformatics , vol.20 , pp. 2317-2319
    • Huber, T.1    Faulkner, G.2    Hugenholtz, P.3
  • 35
    • 3042808436 scopus 로고    scopus 로고
    • An evaluation of 18S rDNA approaches for the study of fungal diversity in grassland soils
    • Hunt J, Boddy L, Randerson PF, Rogers HJ (2004) An evaluation of 18S rDNA approaches for the study of fungal diversity in grassland soils. Microb Ecol 47: 385-395.
    • (2004) Microb Ecol , vol.47 , pp. 385-395
    • Hunt, J.1    Boddy, L.2    Randerson, P.F.3    Rogers, H.J.4
  • 36
    • 76049118198 scopus 로고    scopus 로고
    • Fungal diversity in oxygen-depleted regions of the Arabian Sea revealed by targeted environmental sequencing combined with cultivation
    • Jebaraj CS, Raghukumar C, Behnke A, Stoeck T (2010) Fungal diversity in oxygen-depleted regions of the Arabian Sea revealed by targeted environmental sequencing combined with cultivation. FEMS Microbiol Ecol 71: 399-412.
    • (2010) FEMS Microbiol Ecol , vol.71 , pp. 399-412
    • Jebaraj, C.S.1    Raghukumar, C.2    Behnke, A.3    Stoeck, T.4
  • 37
    • 40849141386 scopus 로고    scopus 로고
    • Detection and diversity of fungi from environmental samples: traditional versus molecular approaches
    • A. Varma, R. Oelmüller (Eds.), Berlin: Springer
    • Jeewon R, Hyde KD (2007) Detection and diversity of fungi from environmental samples: traditional versus molecular approaches. In: Varma A, Oelmüller R (eds) Soil biology, vol 11. Springer, Berlin, pp 1-15.
    • (2007) Soil Biology , vol.11 , pp. 1-15
    • Jeewon, R.1    Hyde, K.D.2
  • 40
    • 33847281506 scopus 로고    scopus 로고
    • Soil fungal communities underneath willow canopies on a primary successional glacier forefront: rDNA sequence results can be affected by primer selection and chimeric data
    • Jumpponen A (2007) Soil fungal communities underneath willow canopies on a primary successional glacier forefront: rDNA sequence results can be affected by primer selection and chimeric data. Microb Ecol 53: 233-246.
    • (2007) Microb Ecol , vol.53 , pp. 233-246
    • Jumpponen, A.1
  • 41
    • 33646682568 scopus 로고    scopus 로고
    • Can rDNA analyses of diverse fungal communities in soil and roots detect effects of environmental manipulations-a case study from tallgrass prairie
    • Jumpponen A, Johnson LC (2005) Can rDNA analyses of diverse fungal communities in soil and roots detect effects of environmental manipulations-a case study from tallgrass prairie. Mycologia 97: 1177-1194.
    • (2005) Mycologia , vol.97 , pp. 1177-1194
    • Jumpponen, A.1    Johnson, L.C.2
  • 42
    • 29144450902 scopus 로고    scopus 로고
    • The comparative mycological analysis of wastewater and sewage sludges from selected wastewater treatment plants
    • Kacprzak M, Neczaj E, Okoniewska E (2005) The comparative mycological analysis of wastewater and sewage sludges from selected wastewater treatment plants. Desalination 185: 363-370.
    • (2005) Desalination , vol.185 , pp. 363-370
    • Kacprzak, M.1    Neczaj, E.2    Okoniewska, E.3
  • 43
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 44
    • 3242668773 scopus 로고    scopus 로고
    • Fungal communities, succession, enzymes and decomposition
    • R. G. Burns and R. P. Dick (Eds.), New York: Marcel Dekker
    • Kjøller AH, Struwe S (2002) Fungal communities, succession, enzymes and decomposition. In: Burns RG, Dick RP (eds) Enzymes in the environment: activity, ecology, and applications. Marcel Dekker, New York, pp 305-324.
    • (2002) Enzymes in the Environment: Activity, Ecology, and Applications , pp. 305-324
    • Kjøller, A.H.1    Struwe, S.2
  • 45
    • 36849048226 scopus 로고    scopus 로고
    • Fungal communities from methane hydrate-bearing deep-sea marine sediments in South China Sea
    • Lai X, Cao L, Tan H, Fang S, Huang Y, Zhou S (2007) Fungal communities from methane hydrate-bearing deep-sea marine sediments in South China Sea. ISME J 1: 756-762.
    • (2007) ISME J , vol.1 , pp. 756-762
    • Lai, X.1    Cao, L.2    Tan, H.3    Fang, S.4    Huang, Y.5    Zhou, S.6
  • 46
    • 78650420404 scopus 로고    scopus 로고
    • Highly diverse and seasonally dynamic protist community in a pristine peat bog
    • Lara E, Mitchell EAD, Moreira D, López Garía P (2010) Highly diverse and seasonally dynamic protist community in a pristine peat bog. Protist 162: 14-32.
    • (2010) Protist , vol.162 , pp. 14-32
    • Lara, E.1    Mitchell, E.A.D.2    Moreira, D.3    López Garía, P.4
  • 47
    • 33846102600 scopus 로고    scopus 로고
    • Unveiling fungal zooflagellates as members of freshwater picoeukaryotes: evidence from a molecular diversity study in a deep meromictic lake
    • Lefèvre E, Bardot C, Noio{cyrillic}l C, Carrias J, Viscogliosi E, Amblard C, Sime-Ngando T (2007) Unveiling fungal zooflagellates as members of freshwater picoeukaryotes: evidence from a molecular diversity study in a deep meromictic lake. Environ Microbiol 9: 61-71.
    • (2007) Environ Microbiol , vol.9 , pp. 61-71
    • Lefèvre, E.1    Bardot, C.2    Noiol, C.3    Carrias, J.4    Viscogliosi, E.5    Amblard, C.6    Sime-Ngando, T.7
  • 49
    • 0035018373 scopus 로고    scopus 로고
    • Extraction and purification of DNA in rhizosphere soil samples for PCR-DGGE analysis of bacterial consortia
    • Maarit-Niemi R, Heiskanen I, Wallenius K, Lindström K (2001) Extraction and purification of DNA in rhizosphere soil samples for PCR-DGGE analysis of bacterial consortia. J Microbiol Methods 45: 155-165.
    • (2001) J Microbiol Methods , vol.45 , pp. 155-165
    • Maarit-Niemi, R.1    Heiskanen, I.2    Wallenius, K.3    Lindström, K.4
  • 50
    • 0041430796 scopus 로고    scopus 로고
    • Microbiology of a biological contactor for winery wastewater treatment
    • Malandra L, Wolfaardt G, Zietsman A, Viljoen-Bloom M (2003) Microbiology of a biological contactor for winery wastewater treatment. Water Res 37: 4125-4134.
    • (2003) Water Res , vol.37 , pp. 4125-4134
    • Malandra, L.1    Wolfaardt, G.2    Zietsman, A.3    Viljoen-Bloom, M.4
  • 51
    • 0034767175 scopus 로고    scopus 로고
    • Comparative denaturing gradient gel electrophoresis analysis of fungal communities associated with whole plant corn silage
    • May LA, Smiley B, Schmidt MG (2001) Comparative denaturing gradient gel electrophoresis analysis of fungal communities associated with whole plant corn silage. Can J Microbiol 47: 829-841.
    • (2001) Can J Microbiol , vol.47 , pp. 829-841
    • May, L.A.1    Smiley, B.2    Schmidt, M.G.3
  • 52
    • 72649093145 scopus 로고    scopus 로고
    • Extracting nucleic acids from activated sludge which reflect community population diversity
    • McIlroy SJ, Porter K, Seviour RJ, Tillett D (2009) Extracting nucleic acids from activated sludge which reflect community population diversity. Antonie van Leeuwenhoek 96: 593-605.
    • (2009) Antonie Van Leeuwenhoek , vol.96 , pp. 593-605
    • McIlroy, S.J.1    Porter, K.2    Seviour, R.J.3    Tillett, D.4
  • 53
    • 77954314220 scopus 로고    scopus 로고
    • Potential use of filamentous fungi for wastewater sludge treatment
    • More TT, Yan S, Tyagi RD, Surampalli RY (2010) Potential use of filamentous fungi for wastewater sludge treatment. Bioresour Technol 101: 7691-7700.
    • (2010) Bioresour Technol , vol.101 , pp. 7691-7700
    • More, T.T.1    Yan, S.2    Tyagi, R.D.3    Surampalli, R.Y.4
  • 54
    • 62949101230 scopus 로고    scopus 로고
    • Different influences of DNA purity indices and quantity on PCR-based DGGE and functional gene microarray in soil microbial community study
    • Ning J, Liebich J, Kästner M, Zhou J, Schäffer A, Burauel P (2009) Different influences of DNA purity indices and quantity on PCR-based DGGE and functional gene microarray in soil microbial community study. Appl Microbiol Biotechnol 82: 983-993.
    • (2009) Appl Microbiol Biotechnol , vol.82 , pp. 983-993
    • Ning, J.1    Liebich, J.2    Kästner, M.3    Zhou, J.4    Schäffer, A.5    Burauel, P.6
  • 55
    • 34547579868 scopus 로고    scopus 로고
    • Genotypic microbial community profiling: a critical technical review
    • Nocker A, Burr M, Camper AK (2007) Genotypic microbial community profiling: a critical technical review. Microb Ecol 54: 276-289.
    • (2007) Microb Ecol , vol.54 , pp. 276-289
    • Nocker, A.1    Burr, M.2    Camper, A.K.3
  • 56
    • 53149135089 scopus 로고    scopus 로고
    • Fungal community ecology: a hybrid beast with a molecular master
    • Peay KG, Kennedy PG, Bruns TD (2008) Fungal community ecology: a hybrid beast with a molecular master. Bioscience 58: 799-810.
    • (2008) Bioscience , vol.58 , pp. 799-810
    • Peay, K.G.1    Kennedy, P.G.2    Bruns, T.D.3
  • 57
    • 0036180460 scopus 로고    scopus 로고
    • Aerobic treatment of winery wastewater using a jet-loop activated sludge reactor
    • Petruccioli M, Cardoso Duarte J, Eusébio A, Federici F (2002) Aerobic treatment of winery wastewater using a jet-loop activated sludge reactor. Process Biochem 37: 821-829.
    • (2002) Process Biochem , vol.37 , pp. 821-829
    • Petruccioli, M.1    Cardoso Duarte, J.2    Eusébio, A.3    Federici, F.4
  • 58
    • 63849324271 scopus 로고    scopus 로고
    • Molecular fingerprinting by PCR-denaturing gradient gel electrophoresis reveals differences in the levels of microbial diversity for musty-earthy tainted corks
    • Prat C, Ruiz-Rueda O, Trias R, Anticó E, Capone D, Sefton M, Bañeras L (2009) Molecular fingerprinting by PCR-denaturing gradient gel electrophoresis reveals differences in the levels of microbial diversity for musty-earthy tainted corks. Appl Environ Microbiol 75: 1922-1931.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 1922-1931
    • Prat, C.1    Ruiz-Rueda, O.2    Trias, R.3    Anticó, E.4    Capone, D.5    Sefton, M.6    Bañeras, L.7
  • 59
    • 0142074115 scopus 로고    scopus 로고
    • Denaturing gradient gel electrophoresis in marine microbial ecology
    • J. H. Paul (Ed.), London: Elsevier
    • Schäfer H, Muzyer G (2001) Denaturing gradient gel electrophoresis in marine microbial ecology. In: Paul JH (ed) Marine microbiology: methods in microbiology, vol 30. Elsevier, London.
    • (2001) Marine Microbiology: Methods in Microbiology, Vol 30
    • Schäfer, H.1    Muzyer, G.2
  • 60
    • 79952533236 scopus 로고    scopus 로고
    • Microbial communities in activated sludge
    • R. Seviour and P. H. Nielson (Eds.), London: IWA
    • Seviour R, Nielson PH (2010) Microbial communities in activated sludge. In: Seviour R, Nielson PH (eds) Microbial ecology of activated sludge. IWA, London, pp 95-126.
    • (2010) Microbial Ecology of Activated Sludge , pp. 95-126
    • Seviour, R.1    Nielson, P.H.2
  • 61
    • 33645054591 scopus 로고    scopus 로고
    • Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting
    • Singh BK, Munro S, Reid E, Ord B, Potts JM, Paterson E, Millard P (2006) Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting. Eur J Soil Sci 57: 72-82.
    • (2006) Eur J Soil Sci , vol.57 , pp. 72-82
    • Singh, B.K.1    Munro, S.2    Reid, E.3    Ord, B.4    Potts, J.M.5    Paterson, E.6    Millard, P.7
  • 62
    • 84864354933 scopus 로고    scopus 로고
    • Molecular detection of fungal communities in soil
    • M. A. Olson and C. T. Smith (Eds.), New York: Taylor and Francis
    • Smit E, de Souza F, Landeweert R (2005) Molecular detection of fungal communities in soil. In: Olson MA, Smith CT (eds) Molecular microbial ecology. Taylor and Francis, New York, pp 271-286.
    • (2005) Molecular Microbial Ecology , pp. 271-286
    • Smit, E.1    de Souza, F.2    Landeweert, R.3
  • 63
    • 0033014645 scopus 로고    scopus 로고
    • Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18 s rRNA and temperature gradient gel electrophoresis
    • Smit E, Leeflang P, Glandorf B, van Elsas J, Wernars K (1999) Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18 s rRNA and temperature gradient gel electrophoresis. Appl Environ Microbiol 65: 2614-2621.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2614-2621
    • Smit, E.1    Leeflang, P.2    Glandorf, B.3    van Elsas, J.4    Wernars, K.5
  • 65
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 66
    • 43649083523 scopus 로고    scopus 로고
    • Importance of DNA quality in comparative soil microbial community structure analyses
    • Thakuria D, Schmidt O, Siúrtáin MM, Egan D, Doohan FM (2008) Importance of DNA quality in comparative soil microbial community structure analyses. Soil Biol Biochem 40: 1390-1403.
    • (2008) Soil Biol Biochem , vol.40 , pp. 1390-1403
    • Thakuria, D.1    Schmidt, O.2    Siúrtáin, M.M.3    Egan, D.4    Doohan, F.M.5
  • 68
    • 0033824163 scopus 로고    scopus 로고
    • Direct analysis of wood-inhabiting fungi using denaturing gradient gel electrophoresis of amplified ribosomal DNA
    • Vainio EJ, Hantula J (2000) Direct analysis of wood-inhabiting fungi using denaturing gradient gel electrophoresis of amplified ribosomal DNA. Mycol Res 104: 927-936.
    • (2000) Mycol Res , vol.104 , pp. 927-936
    • Vainio, E.J.1    Hantula, J.2
  • 71
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (Eds.), New York: Academic
    • White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, New York, pp 315-321.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-321
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.W.4
  • 72
    • 33746613225 scopus 로고    scopus 로고
    • Microbial community structure of activated sludge during aerobic granulation in an annular gap bioreactor
    • Williams JC, de los Reyes FL III (2006) Microbial community structure of activated sludge during aerobic granulation in an annular gap bioreactor. Water Sci Technol 54: 139-146.
    • (2006) Water Sci Technol , vol.54 , pp. 139-146
    • Williams, J.C.1    de los Reyes III, F.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.