A rapid approach for isobaric peptide termini labeling

Methods in Molecular Biology

Volumn 893, Issue , 2012, Pages 129-141

  Koehler, Christian J ^a   Arntzen, Magnus Ø ^a,b,c   Treumann, Achim ^d   Thiede, Bernd ^a  

^a UNIVERSITY OF OSLO   (Norway)

^b OSLO UNIVERSITY HOSPITAL   (Norway)

^c NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

^d NEPAF   (United Kingdom)

Author keywords

Chemical labeling; Dimethylation; Isobaric labeling; Isobaric peptide termini labeling; IsobariQ; iTRAQ; Mass spectrometry; Quantitative proteomics; Succinylation; TMT

Indexed keywords

BORANE DERIVATIVE; FORMALDEHYDE; METALLOPROTEINASE; PEPTIDE FRAGMENT; PEPTIDYL LYS METALLOENDOPEPTIDASE; PEPTIDYL-LYS METALLOENDOPEPTIDASE; PROTEOME; SUCCINIC ANHYDRIDE;

AMINATION; AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; COMPUTER PROGRAM; MASS SPECTROMETRY; MOLECULAR GENETICS; MOLECULAR WEIGHT; OXIDATION REDUCTION REACTION; PEPTIDE MAPPING; PROTEIN DEGRADATION; STATISTICAL ANALYSIS;

AMINATION; AMINO ACID SEQUENCE; BORANES; DATA INTERPRETATION, STATISTICAL; FORMALDEHYDE; MASS SPECTROMETRY; METALLOENDOPEPTIDASES; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; OXIDATION-REDUCTION; PEPTIDE FRAGMENTS; PEPTIDE MAPPING; PROTEOLYSIS; PROTEOME; SOFTWARE; SUCCINIC ANHYDRIDES;

EID: 84864150729     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-885-6_10     Document Type: Article

References (9)

1. Treumann A, Thiede B (2010) Isobaric protein and peptide quantification. Exp Rev Proteomics 7:647-653
2. Ross PL, Huang YN, Marchese JN et al (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3:1154-1169
3. Thompson A, Schafer J, Kuhn K et al (2003) Tandem mass tags: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS. Anal Chem 75:1895-1904
4. Choe L, D'Ascenzo Relkin D, Ross P et al (2007) 8-Plex quantitation of changes in cerebrospinal fl uid protein expression in subjects undergoing intravenous immunoglobulin treatment of Alzheimer's disease. Proteomics 7:3651-3660
5. Koehler CJ, Strozynski M, Kozielski F et al (2009) Isobaric peptide termini labeling for MS/MS-based quantitative proteomics. J Proteome Res 8:4333-4341
6. Arntzen Mø, Koehler CJ, Treumann A, Thiede B (2011) Quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Methods Mol Biol 753:65-76
7. Koehler CJ, Arntzen Mø, Strozynski M et al (2011) Isobaric peptide termini labeling utilizing site-specific N-terminal succinylation. Anal Chem 83:4775-4781
8. Arntzen Mø, Koehler CJ, Barsnes H et al (2011) IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ, and TMT. J Proteome Res 10:913-920
9. Webster J, Oxley D (2005) Peptide mass fingerprinting: Protein identification using MALDI-TOF mass spectrometry. Methods Mol Biol 310:227-240