Simple and universal platform for logic gate operations based on molecular beacon probes

Small

Volumn 8, Issue 14, 2012, Pages 2203-2212

  Park, Ki Soo ^a   Seo, Myung Wan ^a   Jung, Cheulhee ^a   Lee, Joon Young ^a   Park, Hyun Gyu ^a  

^a Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

DNA; logic gates; molecular beacons; molecular electronics

Indexed keywords

COMPUTATIONAL ELEMENTS; CONFORMATIONAL CHANGE; FLUORESCENT SIGNALS; GATE OPERATION; INPUT/OUTPUT; MOLECULAR BEACON; MOLECULAR LEVELS; MOLECULAR LOGIC GATES; NOVEL STRATEGIES; PLATFORM TECHNOLOGY; SINGLE-STRANDED DNA; UNIVERSAL PLATFORM;

DNA; MOLECULAR ELECTRONICS; PROBES;

LOGIC GATES;

OLIGONUCLEOTIDE; SINGLE STRANDED DNA;

ARTICLE; CHEMISTRY; CONFORMATION; GENETIC PROCEDURES; METHODOLOGY; MOLECULAR PROBE; NUCLEOTIDE SEQUENCE; SPECTROFLUOROMETRY; TEMPERATURE;

BASE SEQUENCE; BIOSENSING TECHNIQUES; DNA, SINGLE-STRANDED; MOLECULAR PROBES; NUCLEIC ACID CONFORMATION; OLIGONUCLEOTIDES; SPECTROMETRY, FLUORESCENCE; TEMPERATURE;

EID: 84864142728     PISSN: 16136810     EISSN: 16136829     Source Type: Journal    
DOI: 10.1002/smll.201102758     Document Type: Article

References (44)

1. S. Bi, Y. M. Yan, S. Y. Hao, S. S. Zhang, Angew. Chem. Int. Ed. 2010, 49, 4438.
2. B. M. Frezza, S. L. Cockroft, M. R. Ghadiri, J. Am. Chem. Soc. 2007, 129, 14875.
3. P. Ball, Nature 2000, 406, 118.
4. P. Remon, R. Ferreira, J. M. Montenegro, R. Suau, E. Perez-Inestrosa, U. Pischel, ChemPhysChem 2009, 10, 2004.
5. A. Lake, S. Shang, D. M. Kolpashchikov, Angew. Chem. Int. Ed. 2010, 49, 4459.
6. H. Zhang, X. K. Lin, Y. Yan, L. X. Wu, Chem. Commun. 2006, 4575.
7. A. P. de Silva, S. Uchiyama, Nat. Nanotechnol. 2007, 2, 399.
8. A. P. de Silva, Chem. Asian J. 2011, 6, 750.
9. K. Rurack, C. Trieflinger, A. Koval'chuck, J. Daub, Chem. Eur. J. 2007, 13, 8998.
10. C. H. Xu, W. Sun, Y. R. Zheng, C. J. Fang, C. Zhou, J. Y. Jin, C. H. Yan, New J. Chem. 2009, 33, 838.
11. Y. Liu, A. Offenhausser, D. Mayer, Angew. Chem. Int. Ed. 2010, 49, 2595.
12. M. Motornov, J. Zhou, M. Pita, V. Gopishetty, I. Tokarev, E. Katz, S. Minko, Nano Lett. 2008, 8, 2993.
13. E. Katz, V. Privman, Chem. Soc. Rev. 2010, 39, 1835.
14. M. N. Stojanovic, T. E. Mitchell, D. Stefanovic, J. Am. Chem. Soc. 2002, 124, 3555.
15. A. Saghatelian, N. H. Volcker, K. M. Guckian, V. S. Y. Lin, M. R. Ghadiri, J. Am. Chem. Soc. 2003, 125, 346.
16. M. N. Stojanovic, S. Semova, D. Kolpashchikov, J. Macdonald, C. Morgan, D. Stefanovic, J. Am. Chem. Soc. 2005, 127, 6914.
17. W. Yoshida, Y. Yokobayashi, Chem. Commun. 2007, 195.
18. A. Ogawa, M. Maeda, Chem. Commun. 2009, 4666.
19. T. Li, E. K. Wang, S. J. Dong, J. Am. Chem. Soc. 2009, 131, 15082.
20. R. Freeman, T. Finder, I. Willner, Angew. Chem. Int. Ed. 2009, 48, 7818.
21. M. Moshe, J. Elbaz, I. Willner, Nano Lett. 2009, 9, 1196.
22. C. Zhang, J. Yang, J. Xu, Langmuir 2010, 26, 1416.
23. J. H. Guo, D. M. Kong, H. X. Shen, Biosens. Bioelectron. 2010, 26, 327.
24. K. S. Park, C. Jung, H. G. Park, Angew. Chem. Int. Ed. 2010, 49, 9757.
25. T. Carell, Nature 2011, 469, 45.
26. N. H. Voelcker, K. M. Guckian, A. Saghatelian, M. R. Ghadiri, Small 2008, 4, 427.
27. B. Shlyahovsky, Y. Li, O. Lioubashevski, J. Elbaz, I. Willner, ACS Nano 2009, 3, 1831.
28. G. Seelig, D. Soloveichik, D. Y. Zhang, E. Winfree, Science 2006, 314, 1585.
29. R. Fu, K. Jeon, C. Jung, H. G. Park, Chem. Commun. 2011, 47, 9876.
30. R. Z. Fu, T. H. Li, S. S. Lee, H. G. Park, Anal. Chem. 2011, 83, 494.
31. T. Li, R. Fu, H. G. Park, Chem. Commun. 2010, 46, 3271.
32. Y. K. Jung, T. W. Kim, H. G. Park, H. T. Soh, Adv. Funct. Mater. 2010, 20, 3092.
33. K. M. Wang, Z. W. Tang, C. Y. J. Yang, Y. M. Kim, X. H. Fang, W. Li, Y. R. Wu, C. D. Medley, Z. H. Cao, J. Li, P. Colon, H. Lin, W. H. Tan, Angew. Chem. Int. Ed. 2009, 48, 856.
34. S. A. E. Marras, F. R. Kramer, S. Tyagi, Nucleic Acids Res. 2002, 30, e122.
35. S. Tyagi, F. R. Kramer, Nat. Biotechnol. 1996, 14, 303.
36. Q. P. Guo, X. H. Yang, K. M. Wang, W. H. Tan, W. Li, H. X. Tang, H. M. Li, Nucleic Acids Res. 2009, 37, e20.
37. P. V. Riccelli, F. Merante, K. T. Leung, S. Bortolin, R. L. Zastawny, R. Janeczko, A. S. Benight, Nucleic Acids Res. 2001, 29, 996.
38. A. Tsourkas, M. A. Behlke, G. Bao, Nucleic Acids Res. 2002, 30, 4208.
39. A. P. de Silva, N. D. McClenaghan, Chem. Eur. J. 2004, 10, 574.
40. J. Elbaz, M. Moshe, I. Willner, Angew. Chem. Int. Ed. 2009, 48, 3834.
41. J. Elbaz, Z. G. Wang, R. Orbach, I. Willner, Nano Lett. 2009, 9, 4510.
42. N. C. Gianneschi, M. R. Ghadiri, Angew. Chem. Int. Ed. 2007, 46, 3955.
43. U. Pischel, V. D. Uzunova, P. Remon, W. M. Nau, Chem. Commun. 2010, 46, 2635.
44. D. B. Liu, W. W. Chen, K. Sun, K. Deng, W. Zhang, Z. Wang, X. Y. Jiang, Angew. Chem. Int. Ed. 2011, 50, 4103.