메뉴 건너뛰기




Volumn 63, Issue 1, 2012, Pages 1-10

Examining brain microstructure using structure tensor analysis of histological sections

Author keywords

Anisotropy; Crossing fibers; Diffusion tensor imaging; DiI; Fiber orientation; FODs; GFAP; Histology; MAP2; MBP; ST; Structure tensor

Indexed keywords

ALGORITHM; ANIMAL TISSUE; ANISOTROPY; ARTICLE; BRAIN MICROSTRUCTURE; BRAIN TISSUE; CONTROLLED STUDY; DIFFUSION TENSOR IMAGING; EX VIVO STUDY; FEMALE; FLUORESCENCE MICROSCOPY; HISTOLOGY; IMAGE ANALYSIS; NONHUMAN; PRIORITY JOURNAL; RAT; TISSUE SECTION; WHITE MATTER;

EID: 84864039331     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2012.06.042     Document Type: Article
Times cited : (126)

References (43)
  • 1
    • 26444574077 scopus 로고    scopus 로고
    • Multiple-fiber reconstruction algorithms for diffusion MRI
    • Alexander D.C. Multiple-fiber reconstruction algorithms for diffusion MRI. Ann. N. Y. Acad. Sci. 2005, 1064:113-133.
    • (2005) Ann. N. Y. Acad. Sci. , vol.1064 , pp. 113-133
    • Alexander, D.C.1
  • 3
    • 78649703251 scopus 로고    scopus 로고
    • A novel approach to the human connectome: ultra-high resolution mapping of fiber tracts in the brain
    • Axer M., Amunts K., Grassel D., Palm C., Dammers J., Axer H., Pietrzyk U., Zilles K. A novel approach to the human connectome: ultra-high resolution mapping of fiber tracts in the brain. NeuroImage 2011, 54:1091-1101.
    • (2011) NeuroImage , vol.54 , pp. 1091-1101
    • Axer, M.1    Amunts, K.2    Grassel, D.3    Palm, C.4    Dammers, J.5    Axer, H.6    Pietrzyk, U.7    Zilles, K.8
  • 4
    • 66549124324 scopus 로고    scopus 로고
    • In vivo measurement of axon diameter distribution in the corpus callosum of rat brain
    • Barazany D., Basser P.J., Assaf Y. In vivo measurement of axon diameter distribution in the corpus callosum of rat brain. Brain 2009, 132:1210-1220.
    • (2009) Brain , vol.132 , pp. 1210-1220
    • Barazany, D.1    Basser, P.J.2    Assaf, Y.3
  • 5
    • 0036868692 scopus 로고    scopus 로고
    • The basis of anisotropic water diffusion in the nervous system - a technical review
    • Beaulieu C. The basis of anisotropic water diffusion in the nervous system - a technical review. NMR Biomed. 2002, 15:435-455.
    • (2002) NMR Biomed. , vol.15 , pp. 435-455
    • Beaulieu, C.1
  • 6
    • 9244242591 scopus 로고    scopus 로고
    • Recognition by symmetry derivatives and the generalized structure tensor
    • Bigun J., Bigun T., Nilsson K. Recognition by symmetry derivatives and the generalized structure tensor. IEEE Trans. Pattern Anal. Mach. Intell. 2004, 26:1590-1605.
    • (2004) IEEE Trans. Pattern Anal. Mach. Intell. , vol.26 , pp. 1590-1605
    • Bigun, J.1    Bigun, T.2    Nilsson, K.3
  • 8
    • 79957894568 scopus 로고    scopus 로고
    • Diffusion tensor imaging detects early cerebral cortex abnormalities in neuronal architecture induced by bilateral neonatal enucleation: an experimental model in the ferret
    • Bock A.S., Olavarria J.F., Leigland L.A., Taber E.N., Jespersen S.N., Kroenke C.D. Diffusion tensor imaging detects early cerebral cortex abnormalities in neuronal architecture induced by bilateral neonatal enucleation: an experimental model in the ferret. Front. Syst. Neurosci. 2010, 4:149.
    • (2010) Front. Syst. Neurosci. , vol.4 , pp. 149
    • Bock, A.S.1    Olavarria, J.F.2    Leigland, L.A.3    Taber, E.N.4    Jespersen, S.N.5    Kroenke, C.D.6
  • 9
    • 80051970582 scopus 로고    scopus 로고
    • The contribution of gliosis to diffusion tensor anisotropy and tractography following traumatic brain injury: validation in the rat using Fourier analysis of stained tissue sections
    • Budde M.D., Janes L., Gold E., Turtzo L.C., Frank J.A. The contribution of gliosis to diffusion tensor anisotropy and tractography following traumatic brain injury: validation in the rat using Fourier analysis of stained tissue sections. Brain 2011, 134:2248-2260.
    • (2011) Brain , vol.134 , pp. 2248-2260
    • Budde, M.D.1    Janes, L.2    Gold, E.3    Turtzo, L.C.4    Frank, J.A.5
  • 11
    • 63849246613 scopus 로고    scopus 로고
    • Axial diffusivity is the primary correlate of axonal injury in the experimental autoimmune encephalomyelitis spinal cord: a quantitative pixelwise analysis
    • Budde M.D., Xie M., Cross A.H., Song S.K. Axial diffusivity is the primary correlate of axonal injury in the experimental autoimmune encephalomyelitis spinal cord: a quantitative pixelwise analysis. J. Neurosci. 2009, 29:2805-2813.
    • (2009) J. Neurosci. , vol.29 , pp. 2805-2813
    • Budde, M.D.1    Xie, M.2    Cross, A.H.3    Song, S.K.4
  • 13
    • 84862319217 scopus 로고    scopus 로고
    • Validation of diffusion tensor MRI in the central nervous system using light microscopy: quantitative comparison of fiber properties
    • Choe A.S., Stepniewska I., Colvin D.C., Ding Z., Anderson A.W. Validation of diffusion tensor MRI in the central nervous system using light microscopy: quantitative comparison of fiber properties. NMR Biomed. 2012, 25:900-908.
    • (2012) NMR Biomed. , vol.25 , pp. 900-908
    • Choe, A.S.1    Stepniewska, I.2    Colvin, D.C.3    Ding, Z.4    Anderson, A.W.5
  • 14
    • 67651033331 scopus 로고    scopus 로고
    • A software tool to generate simulated white matter structures for the assessment of fibre-tracking algorithms
    • Close T.G., Tournier J.D., Calamante F., Johnston L.A., Mareels I., Connelly A. A software tool to generate simulated white matter structures for the assessment of fibre-tracking algorithms. NeuroImage 2009, 47:1288-1300.
    • (2009) NeuroImage , vol.47 , pp. 1288-1300
    • Close, T.G.1    Tournier, J.D.2    Calamante, F.3    Johnston, L.A.4    Mareels, I.5    Connelly, A.6
  • 16
    • 79952428963 scopus 로고    scopus 로고
    • An ex vivo imaging pipeline for producing high-quality and high-resolution diffusion-weighted imaging datasets
    • Dyrby T.B., Baare W.F., Alexander D.C., Jelsing J., Garde E., Sogaard L.V. An ex vivo imaging pipeline for producing high-quality and high-resolution diffusion-weighted imaging datasets. Hum. Brain Mapp. 2011, 32:544-563.
    • (2011) Hum. Brain Mapp. , vol.32 , pp. 544-563
    • Dyrby, T.B.1    Baare, W.F.2    Alexander, D.C.3    Jelsing, J.4    Garde, E.5    Sogaard, L.V.6
  • 19
    • 77953713389 scopus 로고    scopus 로고
    • Cellular-level diffusion tensor microscopy and fiber tracking in mammalian nervous tissue with direct histological correlation
    • Flint J.J., Hansen B., Fey M., Schmidig D., King M.A., Vestergaard-Poulsen P., Blackband S.J. Cellular-level diffusion tensor microscopy and fiber tracking in mammalian nervous tissue with direct histological correlation. NeuroImage 2010, 52:556-561.
    • (2010) NeuroImage , vol.52 , pp. 556-561
    • Flint, J.J.1    Hansen, B.2    Fey, M.3    Schmidig, D.4    King, M.A.5    Vestergaard-Poulsen, P.6    Blackband, S.J.7
  • 22
  • 23
    • 84855393290 scopus 로고    scopus 로고
    • Determination of axonal and dendritic orientation distributions within the developing cerebral cortex by diffusion tensor imaging
    • Jespersen S.N., Leigland L.A., Cornea A., Kroenke C.D. Determination of axonal and dendritic orientation distributions within the developing cerebral cortex by diffusion tensor imaging. IEEE Trans. Med. Imaging 2012, 31:16-32.
    • (2012) IEEE Trans. Med. Imaging , vol.31 , pp. 16-32
    • Jespersen, S.N.1    Leigland, L.A.2    Cornea, A.3    Kroenke, C.D.4
  • 24
    • 84857687847 scopus 로고    scopus 로고
    • Light sheet microscopy of living or cleared specimens
    • Keller P.J., Dodt H.U. Light sheet microscopy of living or cleared specimens. Curr. Opin. Neurobiol. 2011, 22:138-143.
    • (2011) Curr. Opin. Neurobiol. , vol.22 , pp. 138-143
    • Keller, P.J.1    Dodt, H.U.2
  • 28
    • 68449084535 scopus 로고    scopus 로고
    • White matter atlases based on diffusion tensor imaging
    • Mori S., Oishi K., Faria A.V. White matter atlases based on diffusion tensor imaging. Curr. Opin. Neurol. 2009, 22:362-369.
    • (2009) Curr. Opin. Neurol. , vol.22 , pp. 362-369
    • Mori, S.1    Oishi, K.2    Faria, A.V.3
  • 29
    • 33744928872 scopus 로고    scopus 로고
    • Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT)
    • Ozarslan E., Shepherd T.M., Vemuri B.C., Blackband S.J., Mareci T.H. Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT). NeuroImage 2006, 31:1086-1103.
    • (2006) NeuroImage , vol.31 , pp. 1086-1103
    • Ozarslan, E.1    Shepherd, T.M.2    Vemuri, B.C.3    Blackband, S.J.4    Mareci, T.H.5
  • 30
    • 57149086459 scopus 로고    scopus 로고
    • New diffusion phantoms dedicated to the study and validation of high-angular-resolution diffusion imaging (HARDI) models
    • Poupon C., Rieul B., Kezele I., Perrin M., Poupon F., Mangin J.F. New diffusion phantoms dedicated to the study and validation of high-angular-resolution diffusion imaging (HARDI) models. Magn. Reson. Med. 2008, 60:1276-1283.
    • (2008) Magn. Reson. Med. , vol.60 , pp. 1276-1283
    • Poupon, C.1    Rieul, B.2    Kezele, I.3    Perrin, M.4    Poupon, F.5    Mangin, J.F.6
  • 33
    • 79952000720 scopus 로고    scopus 로고
    • Improvement in cytoarchitectonic mapping by combining electrodynamic modeling with local orientation in high-resolution images of the cerebral cortex
    • Schmitt O., Birkholz H. Improvement in cytoarchitectonic mapping by combining electrodynamic modeling with local orientation in high-resolution images of the cerebral cortex. Microsc. Res. Tech. 2010, 74:225-243.
    • (2010) Microsc. Res. Tech. , vol.74 , pp. 225-243
    • Schmitt, O.1    Birkholz, H.2
  • 34
  • 35
    • 33748308755 scopus 로고    scopus 로고
    • Structural insights from high-resolution diffusion tensor imaging and tractography of the isolated rat hippocampus
    • Shepherd T.M., Ozarslan E., King M.A., Mareci T.H., Blackband S.J. Structural insights from high-resolution diffusion tensor imaging and tractography of the isolated rat hippocampus. NeuroImage 2006, 32:1499-1509.
    • (2006) NeuroImage , vol.32 , pp. 1499-1509
    • Shepherd, T.M.1    Ozarslan, E.2    King, M.A.3    Mareci, T.H.4    Blackband, S.J.5
  • 36
    • 0034567198 scopus 로고    scopus 로고
    • Condition number as a measure of noise performance of diffusion tensor data acquisition schemes with MRI
    • Skare S., Hedehus M., Moseley M.E., Li T.Q. Condition number as a measure of noise performance of diffusion tensor data acquisition schemes with MRI. J. Magn. Reson. 2000, 147:340-352.
    • (2000) J. Magn. Reson. , vol.147 , pp. 340-352
    • Skare, S.1    Hedehus, M.2    Moseley, M.E.3    Li, T.Q.4
  • 37
    • 0344983758 scopus 로고    scopus 로고
    • Diffusion tensor imaging detects and differentiates axon and myelin degeneration in mouse optic nerve after retinal ischemia
    • Song S.K., Sun S.W., Ju W.K., Lin S.J., Cross A.H., Neufeld A.H. Diffusion tensor imaging detects and differentiates axon and myelin degeneration in mouse optic nerve after retinal ischemia. NeuroImage 2003, 20:1714-1722.
    • (2003) NeuroImage , vol.20 , pp. 1714-1722
    • Song, S.K.1    Sun, S.W.2    Ju, W.K.3    Lin, S.J.4    Cross, A.H.5    Neufeld, A.H.6
  • 41
    • 28444477694 scopus 로고    scopus 로고
    • Mapping complex tissue architecture with diffusion spectrum magnetic resonance imaging
    • Wedeen V.J., Hagmann P., Tseng W.Y., Reese T.G., Weisskoff R.M. Mapping complex tissue architecture with diffusion spectrum magnetic resonance imaging. Magn. Reson. Med. 2005, 54:1377-1386.
    • (2005) Magn. Reson. Med. , vol.54 , pp. 1377-1386
    • Wedeen, V.J.1    Hagmann, P.2    Tseng, W.Y.3    Reese, T.G.4    Weisskoff, R.M.5
  • 43
    • 79952048755 scopus 로고    scopus 로고
    • Estimation of fiber orientation and spin density distribution by diffusion deconvolution
    • Yeh F.C., Wedeen V.J., Tseng W.Y. Estimation of fiber orientation and spin density distribution by diffusion deconvolution. NeuroImage 2011, 55:1054-1062.
    • (2011) NeuroImage , vol.55 , pp. 1054-1062
    • Yeh, F.C.1    Wedeen, V.J.2    Tseng, W.Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.