-
1
-
-
0035985580
-
The extracytoplasmic function (ECF) sigma factors
-
Helmann JD, (2002) The extracytoplasmic function (ECF) sigma factors. Adv Microb Physiol 46: 47-110.
-
(2002)
Adv Microb Physiol
, vol.46
, pp. 47-110
-
-
Helmann, J.D.1
-
2
-
-
0030271890
-
Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase
-
Malhotra A, Severinova E, Darst SA, (1996) Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase. cell 87: 127-136.
-
(1996)
Cell
, vol.87
, pp. 127-136
-
-
Malhotra, A.1
Severinova, E.2
Darst, S.A.3
-
4
-
-
0039820099
-
Eubacterial sigma-factors
-
Wosten MM, (1998) Eubacterial sigma-factors. FEMS Microbiol Rev 22: 127-150.
-
(1998)
FEMS Microbiol Rev
, vol.22
, pp. 127-150
-
-
Wosten, M.M.1
-
5
-
-
0026612797
-
The sigma 70 family: sequence conservation and evolutionary relationships
-
Lonetto M, Gribskov M, Gross CA, (1992) The sigma 70 family: sequence conservation and evolutionary relationships. J Bacteriol 174: 3843-3849.
-
(1992)
J Bacteriol
, vol.174
, pp. 3843-3849
-
-
Lonetto, M.1
Gribskov, M.2
Gross, C.A.3
-
6
-
-
1842558298
-
Control of the alternative sigma factor sigmaE in Escherichia coli
-
Ades SE, (2004) Control of the alternative sigma factor sigmaE in Escherichia coli. Curr Opin Microbiol 7: 157-162.
-
(2004)
Curr Opin Microbiol
, vol.7
, pp. 157-162
-
-
Ades, S.E.1
-
7
-
-
0012837562
-
Crystal structure of Escherichia coli sigmaE with the cytoplasmic domain of its anti-sigma RseA
-
Campbell EA, Tupy JL, Gruber TM, Wang S, Sharp MM, et al. (2003) Crystal structure of Escherichia coli sigmaE with the cytoplasmic domain of its anti-sigma RseA. Mol Cell 11: 1067-1078.
-
(2003)
Mol Cell
, vol.11
, pp. 1067-1078
-
-
Campbell, E.A.1
Tupy, J.L.2
Gruber, T.M.3
Wang, S.4
Sharp, M.M.5
-
8
-
-
3142683280
-
The Bacillus subtilis sigmaW anti-sigma factor RsiW is degraded by intramembrane proteolysis through YluC
-
Schobel S, Zellmeier S, Schumann W, Wiegert T, (2004) The Bacillus subtilis sigmaW anti-sigma factor RsiW is degraded by intramembrane proteolysis through YluC. Mol Microbiol 52: 1091-1105.
-
(2004)
Mol Microbiol
, vol.52
, pp. 1091-1105
-
-
Schobel, S.1
Zellmeier, S.2
Schumann, W.3
Wiegert, T.4
-
9
-
-
0030907038
-
Modulation of the Escherichia coli sigmaE (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins
-
Missiakas D, Mayer MP, Lemaire M, Georgopoulos C, Raina S, (1997) Modulation of the Escherichia coli sigmaE (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins. Mol Microbiol 24: 355-371.
-
(1997)
Mol Microbiol
, vol.24
, pp. 355-371
-
-
Missiakas, D.1
Mayer, M.P.2
Lemaire, M.3
Georgopoulos, C.4
Raina, S.5
-
10
-
-
31144454629
-
Conserved and variable functions of the sigmaE stress response in related genomes
-
Rhodius VA, Suh WC, Nonaka G, West J, Gross CA, (2006) Conserved and variable functions of the sigmaE stress response in related genomes. PLoS Biol 4: e2.
-
(2006)
PLoS Biol
, vol.4
-
-
Rhodius, V.A.1
Suh, W.C.2
Nonaka, G.3
West, J.4
Gross, C.A.5
-
11
-
-
70350096515
-
Reduced capacity of alternative sigmas to melt promoters ensures stringent promoter recognition
-
Koo BM, Rhodius VA, Nonaka G, deHaseth PL, Gross CA, (2009) Reduced capacity of alternative sigmas to melt promoters ensures stringent promoter recognition. Genes Dev 23: 2426-2436.
-
(2009)
Genes Dev
, vol.23
, pp. 2426-2436
-
-
Koo, B.M.1
Rhodius, V.A.2
Nonaka, G.3
deHaseth, P.L.4
Gross, C.A.5
-
12
-
-
77649254204
-
Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE
-
Rhodius VA, Mutalik VK, (2010) Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE. Proc Natl Acad Sci U S A 107: 2854-2859.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 2854-2859
-
-
Rhodius, V.A.1
Mutalik, V.K.2
-
13
-
-
0036307635
-
Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches
-
Cao M, Kobel PA, Morshedi MM, Wu MF, Paddon C, et al. (2002) Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches. J Mol Biol 316: 443-457.
-
(2002)
J Mol Biol
, vol.316
, pp. 443-457
-
-
Cao, M.1
Kobel, P.A.2
Morshedi, M.M.3
Wu, M.F.4
Paddon, C.5
-
14
-
-
0031826742
-
Promoter recognition by Bacillus subtilis sigmaW: autoregulation and partial overlap with the sigmaX regulon
-
Huang X, Fredrick KL, Helmann JD, (1998) Promoter recognition by Bacillus subtilis sigmaW: autoregulation and partial overlap with the sigmaX regulon. J Bacteriol 180: 3765-3770.
-
(1998)
J Bacteriol
, vol.180
, pp. 3765-3770
-
-
Huang, X.1
Fredrick, K.L.2
Helmann, J.D.3
-
15
-
-
0032952070
-
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W
-
Huang X, Gaballa A, Cao M, Helmann JD, (1999) Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W. Mol Microbiol 31: 361-371.
-
(1999)
Mol Microbiol
, vol.31
, pp. 361-371
-
-
Huang, X.1
Gaballa, A.2
Cao, M.3
Helmann, J.D.4
-
16
-
-
0032577384
-
Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search
-
Huang X, Helmann JD, (1998) Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search. J Mol Biol 279: 165-173.
-
(1998)
J Mol Biol
, vol.279
, pp. 165-173
-
-
Huang, X.1
Helmann, J.D.2
-
17
-
-
0034884397
-
Thermoanaerobacter tengcongensissp.nov., a novel anaerobic, saccharolytic, thermophilic bacterium isolated from a hot spring in Tengcong, China
-
Xue Y, Xu Y, Liu Y, Ma Y, Zhou P, (2001) Thermoanaerobacter tengcongensissp.nov., a novel anaerobic, saccharolytic, thermophilic bacterium isolated from a hot spring in Tengcong, China. Int J Syst Evol Microbiol 51: 1335-1341.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1335-1341
-
-
Xue, Y.1
Xu, Y.2
Liu, Y.3
Ma, Y.4
Zhou, P.5
-
18
-
-
0036112438
-
A complete sequence of the T. tengcongensis genome
-
Bao Q, Tian Y, Li W, Xu Z, Xuan Z, et al. (2002) A complete sequence of the T. tengcongensis genome. Genome Res 12: 689-700.
-
(2002)
Genome Res
, vol.12
, pp. 689-700
-
-
Bao, Q.1
Tian, Y.2
Li, W.3
Xu, Z.4
Xuan, Z.5
-
19
-
-
70350432754
-
The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family
-
Staron A, Sofia HJ, Dietrich S, Ulrich LE, Liesegang H, et al. (2009) The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family. Mol Microbiol 74: 557-581.
-
(2009)
Mol Microbiol
, vol.74
, pp. 557-581
-
-
Staron, A.1
Sofia, H.J.2
Dietrich, S.3
Ulrich, L.E.4
Liesegang, H.5
-
20
-
-
0034780493
-
Periplasmic stress and ECF sigma factors
-
Raivio TL, Silhavy TJ, (2001) Periplasmic stress and ECF sigma factors. Annu Rev Microbiol 55: 591-624.
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 591-624
-
-
Raivio, T.L.1
Silhavy, T.J.2
-
21
-
-
0030971546
-
The Bacillus subtilis sigma(X) protein is an extracytoplasmic function sigma factor contributing to survival at high temperature
-
Huang X, Decatur A, Sorokin A, Helmann JD, (1997) The Bacillus subtilis sigma(X) protein is an extracytoplasmic function sigma factor contributing to survival at high temperature. J Bacteriol 179: 2915-2921.
-
(1997)
J Bacteriol
, vol.179
, pp. 2915-2921
-
-
Huang, X.1
Decatur, A.2
Sorokin, A.3
Helmann, J.D.4
-
22
-
-
0027132539
-
Amino-terminal amino acids modulate sigma-factor DNA-binding activity
-
Dombroski AJ, Walter WA, Gross CA, (1993) Amino-terminal amino acids modulate sigma-factor DNA-binding activity. Genes Dev 7: 2446-2455.
-
(1993)
Genes Dev
, vol.7
, pp. 2446-2455
-
-
Dombroski, A.J.1
Walter, W.A.2
Gross, C.A.3
-
23
-
-
0026755533
-
Polypeptides containing highly conserved regions of transcription initiation factor sigma 70 exhibit specificity of binding to promoter DNA
-
Dombroski AJ, Walter WA, Record MT Jr, Siegele DA, Gross CA, (1992) Polypeptides containing highly conserved regions of transcription initiation factor sigma 70 exhibit specificity of binding to promoter DNA. cell 70: 501-512.
-
(1992)
Cell
, vol.70
, pp. 501-512
-
-
Dombroski, A.J.1
Walter, W.A.2
Record Jr., M.T.3
Siegele, D.A.4
Gross, C.A.5
-
24
-
-
50049100893
-
Signaling mechanisms for activation of extracytoplasmic function (ECF) sigma factors
-
Brooks BE, Buchanan SK, (2008) Signaling mechanisms for activation of extracytoplasmic function (ECF) sigma factors. Biochim Biophys Acta 1778: 1930-1945.
-
(2008)
Biochim Biophys Acta
, vol.1778
, pp. 1930-1945
-
-
Brooks, B.E.1
Buchanan, S.K.2
-
25
-
-
0032578471
-
Promoter opening via a DNA fork junction binding activity
-
Guo Y, Gralla JD, (1998) Promoter opening via a DNA fork junction binding activity. Proc Natl Acad Sci U S A 95: 11655-11660.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 11655-11660
-
-
Guo, Y.1
Gralla, J.D.2
-
26
-
-
0030576519
-
Base-specific recognition of the nontemplate strand of promoter DNA by E. coli RNA polymerase
-
Roberts CW, Roberts JW, (1996) Base-specific recognition of the nontemplate strand of promoter DNA by E. coli RNA polymerase. cell 86: 495-501.
-
(1996)
Cell
, vol.86
, pp. 495-501
-
-
Roberts, C.W.1
Roberts, J.W.2
-
27
-
-
33847243639
-
Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element
-
Zenkin N, Kulbachinskiy A, Yuzenkova Y, Mustaev A, Bass I, et al. (2007) Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element. EMBO J 26: 955-964.
-
(2007)
EMBO J
, vol.26
, pp. 955-964
-
-
Zenkin, N.1
Kulbachinskiy, A.2
Yuzenkova, Y.3
Mustaev, A.4
Bass, I.5
-
28
-
-
33748625150
-
The structural basis for promoter -35 element recognition by the group IV sigma factors
-
Lane WJ, Darst SA, (2006) The structural basis for promoter -35 element recognition by the group IV sigma factors. PLoS Biol 4: e269.
-
(2006)
PLoS Biol
, vol.4
-
-
Lane, W.J.1
Darst, S.A.2
-
29
-
-
0027230594
-
Compilation of E. coli mRNA promoter sequences
-
Lisser S, Margalit H, (1993) Compilation of E. coli mRNA promoter sequences. Nucleic Acids Res 21: 1507-1516.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 1507-1516
-
-
Lisser, S.1
Margalit, H.2
-
30
-
-
83255167029
-
Structural basis for promoter-10 element recognition by the bacterial RNA polymerase sigma subunit
-
Feklistov A, Darst SA, (2011) Structural basis for promoter-10 element recognition by the bacterial RNA polymerase sigma subunit. cell 147: 1257-1269.
-
(2011)
Cell
, vol.147
, pp. 1257-1269
-
-
Feklistov, A.1
Darst, S.A.2
-
31
-
-
0036589166
-
The Tol proteins of Escherichia coli and their involvement in the translocation of group A colicins
-
Lazzaroni JC, Dubuisson JF, Vianney A, (2002) The Tol proteins of Escherichia coli and their involvement in the translocation of group A colicins. Biochimie 84: 391-397.
-
(2002)
Biochimie
, vol.84
, pp. 391-397
-
-
Lazzaroni, J.C.1
Dubuisson, J.F.2
Vianney, A.3
-
32
-
-
33644747718
-
Mutational analysis of an extracytoplasmic-function sigma factor to investigate its interactions with RNA polymerase and DNA
-
Wilson MJ, Lamont IL, (2006) Mutational analysis of an extracytoplasmic-function sigma factor to investigate its interactions with RNA polymerase and DNA. J Bacteriol 188: 1935-1942.
-
(2006)
J Bacteriol
, vol.188
, pp. 1935-1942
-
-
Wilson, M.J.1
Lamont, I.L.2
-
33
-
-
65549091444
-
Mutational analysis of Escherichia coli sigma28 and its target promoters reveals recognition of a composite -10 region, comprised of an 'extended -10' motif and a core -10 element
-
Koo BM, Rhodius VA, Campbell EA, Gross CA, (2009) Mutational analysis of Escherichia coli sigma28 and its target promoters reveals recognition of a composite -10 region, comprised of an 'extended -10' motif and a core -10 element. Mol Microbiol 72: 830-843.
-
(2009)
Mol Microbiol
, vol.72
, pp. 830-843
-
-
Koo, B.M.1
Rhodius, V.A.2
Campbell, E.A.3
Gross, C.A.4
-
34
-
-
70350090283
-
Promoter recognition by bacterial alternative sigma factors: the price of high selectivity?
-
Feklistov A, Darst SA, (2009) Promoter recognition by bacterial alternative sigma factors: the price of high selectivity? Genes Dev 23: 2371-2375.
-
(2009)
Genes Dev
, vol.23
, pp. 2371-2375
-
-
Feklistov, A.1
Darst, S.A.2
-
35
-
-
43549108134
-
Replication initiator DnaA interacts with an anti-terminator NusG in T. tengcongensis
-
Liu J, Pei H, Mei S, Li J, Zhou L, et al. (2008) Replication initiator DnaA interacts with an anti-terminator NusG in T. tengcongensis. Biochem Biophys Res Commun 371: 573-577.
-
(2008)
Biochem Biophys Res Commun
, vol.371
, pp. 573-577
-
-
Liu, J.1
Pei, H.2
Mei, S.3
Li, J.4
Zhou, L.5
-
36
-
-
3943064227
-
Complete sequence and molecular characterization of pNB101, a rolling-circle replicating plasmid from the haloalkaliphilic archaeon Natronobacterium sp. strain AS7091
-
Zhou M, Xiang H, Sun C, Li Y, Liu J, et al. (2004) Complete sequence and molecular characterization of pNB101, a rolling-circle replicating plasmid from the haloalkaliphilic archaeon Natronobacterium sp. strain AS7091. Extremophiles 8: 91-98.
-
(2004)
Extremophiles
, vol.8
, pp. 91-98
-
-
Zhou, M.1
Xiang, H.2
Sun, C.3
Li, Y.4
Liu, J.5
|