-
1
-
-
0002650761
-
Cytoplasmic membrane
-
Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press;
-
Kadner RJ: Cytoplasmic membrane. In Escherichia coli and Salmonella: Cellular and Molecular Biology, edn 2. Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press; 1996:58-87.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, Edn 2
, pp. 58-87
-
-
Kadner, R.J.1
-
2
-
-
0002431489
-
Outer membrane
-
Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press;
-
Nikaido H: Outer membrane. In Escherichia coli and Salmonella: Cellular and Molecular Biology, edn 2. Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press; 1996:29-47.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, Edn 2
, pp. 29-47
-
-
Nikaido, H.1
-
3
-
-
0002660099
-
Periplasm
-
Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press;
-
Oliver DB: Periplasm. In Escherichia coli and Salmonella: Cellular and Molecular Biology, edn 2. Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press; 1996:88-103.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, Edn 2
, pp. 88-103
-
-
Oliver, D.B.1
-
4
-
-
0001985244
-
The murein sacculus
-
Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press;
-
Park JT: The murein sacculus. In Escherichia coli and Salmonella: Cellular and Molecular Biology, edn 2. Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press; 1996:48-57.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, Edn 2
, pp. 48-57
-
-
Park, J.T.1
-
6
-
-
0020322217
-
Fatty acid synthetase system in the regulation of membrane lipid synthesis in Escherichia coli after shifts in temperature
-
Okuyama H., Saitoh M., Hiramatsu R. Fatty acid synthetase system in the regulation of membrane lipid synthesis in Escherichia coli after shifts in temperature. J Biol Chem. 257:1982;4812-4817.
-
(1982)
J Biol Chem
, vol.257
, pp. 4812-4817
-
-
Okuyama, H.1
Saitoh, M.2
Hiramatsu, R.3
-
7
-
-
0001175140
-
Morphological and physiological changes during stationary phase
-
Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press;
-
Huisman GW, Siegele DA, Zambrano MM, Kolter R: Morphological and physiological changes during stationary phase. In Escherichia coli and Salmonella: Cellular and Molecular Biology, edn 2. Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press; 1996:1672-1682.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, Edn 2
, pp. 1672-1682
-
-
Huisman, G.W.1
Siegele, D.A.2
Zambrano, M.M.3
Kolter, R.4
-
8
-
-
0034780493
-
Periplasmic stress and ECF sigma factors
-
Raivio T.L., Silhavy T.J. Periplasmic stress and ECF sigma factors. Annu Rev Microbiol. 55:2001;591-624.
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 591-624
-
-
Raivio, T.L.1
Silhavy, T.J.2
-
9
-
-
0142043317
-
New members of the Escherichia coli sigma e regulon identified by a two-plasmid system
-
E regulon plays a role in primary metabolic functions of the cell envelope in addition to the stress response.
-
E regulon plays a role in primary metabolic functions of the cell envelope in addition to the stress response.
-
(2003)
FEMS Microbiol Lett
, vol.225
, pp. 1-7
-
-
Rezuchova, B.1
Miticka, H.2
Homerova, D.3
Roberts, M.4
Kormanec, J.5
-
10
-
-
0030611694
-
Sigma e is an essential sigma factor in Escherichia coli
-
De Las Penas A., Connolly L., Gross C.A. Sigma E is an essential sigma factor in Escherichia coli. J Bacteriol. 179:1997;6862-6864.
-
(1997)
J Bacteriol
, vol.179
, pp. 6862-6864
-
-
De Las Penas, A.1
Connolly, L.2
Gross, C.A.3
-
11
-
-
0035877593
-
Characterization of the Escherichia coli sigma e regulon
-
Dartigalongue C., Missiakas D., Raina S. Characterization of the Escherichia coli sigma E regulon. J Biol Chem. 276:2001;20866-20875.
-
(2001)
J Biol Chem
, vol.276
, pp. 20866-20875
-
-
Dartigalongue, C.1
Missiakas, D.2
Raina, S.3
-
12
-
-
0027787823
-
The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins
-
Mecsas J., Rouviere P.E., Erickson J.W., Donohue T.J., Gross C.A. The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins. Genes Dev. 7:1993;2618-2628.
-
(1993)
Genes Dev
, vol.7
, pp. 2618-2628
-
-
Mecsas, J.1
Rouviere, P.E.2
Erickson, J.W.3
Donohue, T.J.4
Gross, C.A.5
-
13
-
-
0028907529
-
RpoE, the gene encoding the second heat-shock sigma factor, sigma E, in Escherichia coli
-
Rouviere P.E., De Las Penas A., Mecsas J., Lu C.Z., Rudd K.E., Gross C.A. rpoE, the gene encoding the second heat-shock sigma factor, sigma E, in Escherichia coli. EMBO J. 14:1995;1032-1042.
-
(1995)
EMBO J
, vol.14
, pp. 1032-1042
-
-
Rouviere, P.E.1
De Las Penas, A.2
Mecsas, J.3
Lu, C.Z.4
Rudd, K.E.5
Gross, C.A.6
-
14
-
-
0028920231
-
The rpoE gene encoding the sigma e (sigma 24) heat shock sigma factor of Escherichia coli
-
Raina S., Missiakas D., Georgopoulos C. The rpoE gene encoding the sigma E (sigma 24) heat shock sigma factor of Escherichia coli. EMBO J. 14:1995;1043-1055.
-
(1995)
EMBO J
, vol.14
, pp. 1043-1055
-
-
Raina, S.1
Missiakas, D.2
Georgopoulos, C.3
-
15
-
-
0029765609
-
New components of protein folding in extracytoplasmic compartments of Escherichia coli SurA, FkpA and Skp/OmpH
-
Missiakas D., Betton J.M., Raina S. New components of protein folding in extracytoplasmic compartments of Escherichia coli SurA, FkpA and Skp/OmpH. Mol Microbiol. 21:1996;871-884.
-
(1996)
Mol Microbiol
, vol.21
, pp. 871-884
-
-
Missiakas, D.1
Betton, J.M.2
Raina, S.3
-
16
-
-
0024720477
-
A novel sigma factor is involved in expression of the rpoH gene of Escherichia coli
-
Wang Q.P., Kaguni J.M. A novel sigma factor is involved in expression of the rpoH gene of Escherichia coli. J Bacteriol. 171:1989;4248-4253.
-
(1989)
J Bacteriol
, vol.171
, pp. 4248-4253
-
-
Wang, Q.P.1
Kaguni, J.M.2
-
17
-
-
0024727149
-
Identification of the sigma e subunit of Escherichia coli RNA polymerase: A second alternate sigma factor involved in high-temperature gene expression
-
Erickson J.W., Gross C.A. Identification of the sigma E subunit of Escherichia coli RNA polymerase: a second alternate sigma factor involved in high-temperature gene expression. Genes Dev. 3:1989;1462-1471.
-
(1989)
Genes Dev
, vol.3
, pp. 1462-1471
-
-
Erickson, J.W.1
Gross, C.A.2
-
18
-
-
0034681260
-
Regulated intramembrane proteolysis: A control mechanism conserved from bacteria to humans
-
Brown M.S., Ye J., Rawson R.B., Goldstein J.L. Regulated intramembrane proteolysis: a control mechanism conserved from bacteria to humans. Cell. 100:2000;391-398.
-
(2000)
Cell
, vol.100
, pp. 391-398
-
-
Brown, M.S.1
Ye, J.2
Rawson, R.B.3
Goldstein, J.L.4
-
19
-
-
0033568606
-
The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor
-
Ades S.E., Connolly L.E., Alba B.M., Gross C.A. The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor. Genes Dev. 13:1999;2449-2461.
-
(1999)
Genes Dev
, vol.13
, pp. 2449-2461
-
-
Ades, S.E.1
Connolly, L.E.2
Alba, B.M.3
Gross, C.A.4
-
20
-
-
0344453810
-
Regulation of the alternative sigma factor sigma(E) during initiation, adaptation, and shutoff of the extracytoplasmic heat shock response in Escherichia coli
-
E activity during all phases of the stress response.
-
E activity during all phases of the stress response.
-
(2003)
J Bacteriol
, vol.185
, pp. 2512-2519
-
-
Ades, S.E.1
Grigorova, I.L.2
Gross, C.A.3
-
21
-
-
0030611303
-
The sigmaE-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigmaE
-
De Las Penas A., Connolly L., Gross C.A. The sigmaE-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigmaE. Mol Microbiol. 24:1997;373-385.
-
(1997)
Mol Microbiol
, vol.24
, pp. 373-385
-
-
De Las Penas, A.1
Connolly, L.2
Gross, C.A.3
-
22
-
-
0030907038
-
Modulation of the Escherichia coli sigmaE (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins
-
Missiakas D., Mayer M.P., Lemaire M., Georgopoulos C., Raina S. Modulation of the Escherichia coli sigmaE (RpoE) heat-shock transcription- factor activity by the RseA, RseB and RseC proteins. Mol Microbiol. 24:1997;355-371.
-
(1997)
Mol Microbiol
, vol.24
, pp. 355-371
-
-
Missiakas, D.1
Mayer, M.P.2
Lemaire, M.3
Georgopoulos, C.4
Raina, S.5
-
24
-
-
0037102458
-
YaeL (EcfE) activates the sigma(E) pathway of stress response through a site-2 cleavage of anti-sigma(E), RseA
-
••] demonstrate that RseA is degraded by a two-step mechanism involving the proteases DegS and YaeL. This mechanism is related to a conserved mechanism of transmembrane signaling, regulated intra-membrane proteolysis.
-
••] demonstrate that RseA is degraded by a two-step mechanism involving the proteases DegS and YaeL. This mechanism is related to a conserved mechanism of transmembrane signaling, regulated intra-membrane proteolysis.
-
(2002)
Genes Dev
, vol.16
, pp. 2147-2155
-
-
Kanehara, K.1
Ito, K.2
Akiyama, Y.3
-
25
-
-
0037102509
-
DegS and YaeL participate sequentially in the cleavage of RseA to activate the sigma(E)-dependent extracytoplasmic stress response
-
••] demonstrate that RseA is degraded by a two-step mechanism involving the proteases DegS and YaeL. This mechanism is related to a conserved mechanism of transmembrane signaling, regulated intra-membrane proteolysis.
-
••] demonstrate that RseA is degraded by a two-step mechanism involving the proteases DegS and YaeL. This mechanism is related to a conserved mechanism of transmembrane signaling, regulated intra-membrane proteolysis.
-
(2002)
Genes Dev
, vol.16
, pp. 2156-2168
-
-
Alba, B.M.1
Leeds, J.A.2
Onufryk, C.3
Lu, C.Z.4
Gross, C.A.5
-
26
-
-
0037071844
-
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution
-
Vassylyev D.G., Sekine S., Laptenko O., Lee J., Vassylyeva M.N., Borukhov S., Yokoyama S. Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution. Nature. 417:2002;712-719.
-
(2002)
Nature
, vol.417
, pp. 712-719
-
-
Vassylyev, D.G.1
Sekine, S.2
Laptenko, O.3
Lee, J.4
Vassylyeva, M.N.5
Borukhov, S.6
Yokoyama, S.7
-
27
-
-
0036203066
-
Structure of the bacterial RNA polymerase promoter specificity sigma subunit
-
Campbell E.A., Muzzin O., Chlenov M., Sun J.L., Olson C.A., Weinman O., Trester-Zedlitz M.L., Darst S.A. Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol Cell. 9:2002;527-539.
-
(2002)
Mol Cell
, vol.9
, pp. 527-539
-
-
Campbell, E.A.1
Muzzin, O.2
Chlenov, M.3
Sun, J.L.4
Olson, C.A.5
Weinman, O.6
Trester-Zedlitz, M.L.7
Darst, S.A.8
-
28
-
-
0030271890
-
Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase
-
Malhotra A., Severinova E., Darst S.A. Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase. Cell. 87:1996;127-136.
-
(1996)
Cell
, vol.87
, pp. 127-136
-
-
Malhotra, A.1
Severinova, E.2
Darst, S.A.3
-
29
-
-
0034933064
-
DegS (hhoB) is an essential Escherichia coli gene whose indispensable function is to provide sigma (E) activity
-
Alba B.M., Zhong H.J., Pelayo J.C., Gross C.A. degS (hhoB) is an essential Escherichia coli gene whose indispensable function is to provide sigma (E) activity. Mol Microbiol. 40:2001;1323-1333.
-
(2001)
Mol Microbiol
, vol.40
, pp. 1323-1333
-
-
Alba, B.M.1
Zhong, H.J.2
Pelayo, J.C.3
Gross, C.A.4
-
30
-
-
0035960904
-
Characterization of the yaeL gene product and its S2P-protease motifs in Escherichia coli
-
Kanehara K., Akiyama Y., Ito K. Characterization of the yaeL gene product and its S2P-protease motifs in Escherichia coli. Gene. 281:2001;71-79.
-
(2001)
Gene
, vol.281
, pp. 71-79
-
-
Kanehara, K.1
Akiyama, Y.2
Ito, K.3
-
31
-
-
0346243935
-
YaeL proteolysis of RseA is controlled by the PDZ domain of YaeL and a Gln-rich region of RseA
-
This report describes inhibitory interactions within YaeL and between RseA and YaeL that explain why degradation of RseA by YaeL is dependent on an initial cleavage by DegS.
-
Kanehara K., Ito K., Akiyama Y. YaeL proteolysis of RseA is controlled by the PDZ domain of YaeL and a Gln-rich region of RseA. EMBO J. 22:2003;6389-6398 This report describes inhibitory interactions within YaeL and between RseA and YaeL that explain why degradation of RseA by YaeL is dependent on an initial cleavage by DegS.
-
(2003)
EMBO J
, vol.22
, pp. 6389-6398
-
-
Kanehara, K.1
Ito, K.2
Akiyama, Y.3
-
32
-
-
0344953579
-
OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain
-
Biochemical and in vivo experiments demonstrate that binding of the carboxy-terminal peptide of unfolded porins to the PDZ domain of DegS is the inducing signal that activates the proteolysis of RseA.
-
Walsh N.P., Alba B.M., Bose B., Gross C.A., Sauer R.T. OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain. Cell. 113:2003;61-71 Biochemical and in vivo experiments demonstrate that binding of the carboxy-terminal peptide of unfolded porins to the PDZ domain of DegS is the inducing signal that activates the proteolysis of RseA.
-
(2003)
Cell
, vol.113
, pp. 61-71
-
-
Walsh, N.P.1
Alba, B.M.2
Bose, B.3
Gross, C.A.4
Sauer, R.T.5
-
33
-
-
0032432109
-
Targeting and assembly of periplasmic and outer-membrane proteins in Escherichia coli
-
Danese P.N., Silhavy T.J. Targeting and assembly of periplasmic and outer-membrane proteins in Escherichia coli. Annu Rev Genet. 32:1998;59-94.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 59-94
-
-
Danese, P.N.1
Silhavy, T.J.2
-
34
-
-
0030476750
-
SurA, a periplasmic protein with peptidyl-prolyl isomerase activity, participates in the assembly of outer membrane porins
-
Rouviere P.E., Gross C.A. SurA, a periplasmic protein with peptidyl-prolyl isomerase activity, participates in the assembly of outer membrane porins. Genes Dev. 10:1996;3170-3182.
-
(1996)
Genes Dev
, vol.10
, pp. 3170-3182
-
-
Rouviere, P.E.1
Gross, C.A.2
-
35
-
-
0037187588
-
Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine
-
Krojer T., Garrido-Franco M., Huber R., Ehrmann M., Clausen T. Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine. Nature. 416:2002;455-459.
-
(2002)
Nature
, vol.416
, pp. 455-459
-
-
Krojer, T.1
Garrido-Franco, M.2
Huber, R.3
Ehrmann, M.4
Clausen, T.5
-
36
-
-
0036263973
-
Structural insights into the pro-apoptotic function of mitochondrial serine protease HtrA2/Omi
-
Li W., Srinivasula S.M., Chai J., Li P., Wu J.W., Zhang Z., Alnemri E.S., Shi Y. Structural insights into the pro-apoptotic function of mitochondrial serine protease HtrA2/Omi. Nat Struct Biol. 9:2002;436-441.
-
(2002)
Nat Struct Biol
, vol.9
, pp. 436-441
-
-
Li, W.1
Srinivasula, S.M.2
Chai, J.3
Li, P.4
Wu, J.W.5
Zhang, Z.6
Alnemri, E.S.7
Shi, Y.8
-
37
-
-
0029645574
-
The structure of OmpF porin in a tetragonal crystal form
-
Cowan S.W., Garavito R.M., Jansonius J.N., Jenkins J.A., Karlsson R., Konig N., Pai E.F., Pauptit R.A., Rizkallah P.J., Rosenbusch J.P.et al. The structure of OmpF porin in a tetragonal crystal form. Structure. 3:1995;1041-1050.
-
(1995)
Structure
, vol.3
, pp. 1041-1050
-
-
Cowan, S.W.1
Garavito, R.M.2
Jansonius, J.N.3
Jenkins, J.A.4
Karlsson, R.5
Konig, N.6
Pai, E.F.7
Pauptit, R.A.8
Rizkallah, P.J.9
Rosenbusch, J.P.10
-
38
-
-
0034721887
-
RseB binding to the periplasmic domain of RseA modulates the RseA:sigmaE interaction in the cytoplasm and the availability of sigmaE RNA polymerase
-
Collinet B., Yuzawa H., Chen T., Herrera C., Missiakas D. RseB binding to the periplasmic domain of RseA modulates the RseA:sigmaE interaction in the cytoplasm and the availability of sigmaE RNA polymerase. J Biol Chem. 275:2000;33898-33904.
-
(2000)
J Biol Chem
, vol.275
, pp. 33898-33904
-
-
Collinet, B.1
Yuzawa, H.2
Chen, T.3
Herrera, C.4
Missiakas, D.5
-
39
-
-
0033816974
-
Function of the sigma(E) regulon in dead-cell lysis in stationary-phase Escherichia coli
-
Nitta T., Nagamitsu H., Murata M., Izu H., Yamada M. Function of the sigma(E) regulon in dead-cell lysis in stationary-phase Escherichia coli. J Bacteriol. 182:2000;5231-5237.
-
(2000)
J Bacteriol
, vol.182
, pp. 5231-5237
-
-
Nitta, T.1
Nagamitsu, H.2
Murata, M.3
Izu, H.4
Yamada, M.5
-
40
-
-
0036267552
-
The alternative sigma factor sigmaE controls antioxidant defences required for Salmonella virulence and stationary-phase survival
-
Testerman T.L., Vazquez-Torres A., Xu Y., Jones-Carson J., Libby S.J., Fang F.C. The alternative sigma factor sigmaE controls antioxidant defences required for Salmonella virulence and stationary-phase survival. Mol Microbiol. 43:2002;771-782.
-
(2002)
Mol Microbiol
, vol.43
, pp. 771-782
-
-
Testerman, T.L.1
Vazquez-Torres, A.2
Xu, Y.3
Jones-Carson, J.4
Libby, S.J.5
Fang, F.C.6
-
41
-
-
0034830405
-
Identification of phospholipids as new components that assist in the in vitro trimerization of a bacterial pore protein
-
de Cock H., Pasveer M., Tommassen J., Bouveret E. Identification of phospholipids as new components that assist in the in vitro trimerization of a bacterial pore protein. Eur J Biochem. 268:2001;865-875.
-
(2001)
Eur J Biochem
, vol.268
, pp. 865-875
-
-
De Cock, H.1
Pasveer, M.2
Tommassen, J.3
Bouveret, E.4
-
42
-
-
0003174053
-
The stringent response
-
Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press;
-
Cashel M, Gentry DR, Hernandez VJ, Vinella D: The stringent response. In Escherichia coli and Salmonella: Cellular and Molecular Biology, edn 2, vol 1. Edited by Neidhardt FC, Curtiss R III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE. Washington DC: ASM Press; 1996:1458-1496.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, Edn 2
, vol.1
, pp. 1458-1496
-
-
Cashel, M.1
Gentry, D.R.2
Hernandez, V.J.3
Vinella, D.4
|