Filamentous sulfur-oxidizing bacteria of the genus Thioploca from Lake Tonle Sap in Cambodia

Aquatic Microbial Ecology

Volumn 66, Issue 3, 2012, Pages 295-300

  Nemoto, Fumiko ^a   Kojima, Hisaya ^a   Ohtaka, Akifumi ^b   Fukui, Manabu ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b HIROSAKI UNIVERSITY   (Japan)

Author keywords

Freshwater lake; Phylogeny; Sediment; Sulfur oxidizing bacteria

Indexed keywords

BACTERIA (MICROORGANISMS); THIOMARGARITA; THIOPLOCA;

EID: 84863912641     PISSN: 09483055     EISSN: None     Source Type: Journal    
DOI: 10.3354/ame01578     Document Type: Article

References (21)

1. Dermott R, Legner M (2002) Dense mat-forming bacterium Thioploca ingrica (Beggiatoaceae) in eastern Lake Ontario: implications to the benthic food web. J Gt Lakes Res 28: 688-697 (Pubitemid 36128397)
2. Høgslund S, Nielsen JL, Nielsen LP (2010) Distribution, ecology and molecular identification of Thioploca from Danish brackish water sediments. FEMS Microbiol Ecol 73: 110-120
3. Kojima H, Teske A, Fukui M (2003) Morphological and phylogenetic characterizations of freshwater Thioploca species from Lake Biwa, Japan, and Lake Constance, Germany. Appl Environ Microbiol 69: 390-398 (Pubitemid 36077500)
4. Kojima H, Koizumi Y, Fukui M (2006) Community structure of bacteria associated with sheaths of freshwater and brackish Thioploca species. Microb Ecol 52: 765-773 (Pubitemid 44924014)
5. Kojima H, Nakajima T, Fukui M (2007) Carbon source utilization and accumulation of respiration-related substances by freshwater Thioploca species. FEMS Microbiol Ecol 59: 23-31 (Pubitemid 44952406)
6. Lauterborn R (1907) Eine neue Gattung der Schwefelbakterien (Thioploca schmidlei nov. gen. nov. spec.). Ber Dtsch Bot Ges 25: 238-242
7. Maier S (1984) Description of Thioploca ingrica sp. nov., nom. rev. Int J Syst Bacteriol 34: 344-345 (Pubitemid 14073095)
8. Maier S, Murray RGE (1965) The fine structure of Thioploca ingrica and a comparison with Beggiatoa. Can J Microbiol 11: 645-655
9. Manz W, Amann R, Ludwig W, Wagner M, Schleifer KH (1992) Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions. Syst Appl Microbiol 15: 593-600 (Pubitemid 23036075)
10. Nemoto F, Kojima H, Fukui M (2011) Diversity of freshwater Thioploca species and their specific association with filamentous bacteria of the phylum Chloroflexi. Microb Ecol 62: 753-764
11. NishinoM, Fukui M, Nakajima T (1998) Dense mats of Thioploca, gliding filamentous sulfur-oxidizing bacteria in Lake Biwa, central Japan. Water Res 32: 953-957 (Pubitemid 28075243)
12. Ohtaka A, Watanabe R, Im S, Chhay R, Tsukawaki S (2010) Spatial and seasonal changes of net plankton and zoo - benthos in Lake Tonle Sap, Cambodia. Limnology 11: 85-94
13. Otte S, Kuenen JG, Nielsen LP, Paerl HW and others (1999) Nitrogen, carbon, and sulfur metabolism in natural Thioploca samples. Appl Environ Microbiol 65: 3148-3157 (Pubitemid 29315593)
14. Salman V, Amann R, Girnth AC, Polerecky L and others (2011) A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria. Syst Appl Microbiol 34: 243-259
15. Sayama M (2001) Presence of nitrate-accumulating sulfur bacteria and their influence on nitrogen cycling in a shallow coastal marine sediment. Appl Environ Microbiol 67: 3481-3487 (Pubitemid 33641218)
16. Schulz HN, Schulz HD (2005) Large sulfur bacteria and the formation of phosphorite. Science 307: 416-418 (Pubitemid 40139984)
17. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: mole - cular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599 (Pubitemid 47236692)
18. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882
19. Wislouch SM (1912) Thioploca ingrica nov. sp. Ber Dtsch Bot Ges 30: 470-473
20. Zemskaya TI, Namsaraev BB, Dul'tseva NM, Khanaeva TA and others (2001) Ecophysiological characteristics of the mat-forming bacterium Thioploca in bottom sediments of the Frolikha Bay, northern Baikal. Microbiology 70: 335-341 (Pubitemid 33751934)
21. Zemskaya TI, Chernitsyna SM, Dul'tseva NM, Sergeeva VN, Pogodaeva TV, Namsaraev BB (2009) Colorless sulfur bacteria Thioploca from different sites in Lake Baikal. Microbiology 78: 117-124