Resolution of volatile fuel compound profiles from Ascocoryne sarcoides: A comparison by proton transfer reaction-mass spectrometry and solid phase microextraction gas chromatographymass spectrometry

AMB Express

Volumn 2, Issue 1, 2012, Pages 1-13

  Mallette, Natasha D ^a,b   Berk Knighton, W ^b   Strobel, Gary A ^b   Carlson, Ross P ^a,b   Peyton, Brent M ^a,b  

^a Idaho National Laboratory   (United States)

^b MONTANA STATE UNIVERSITY   (United States)

Author keywords

Biofuel; Fungal hydrocarbons; Gas chromatography mass spectrometry; Proton transfer reaction mass spectrometry; Solid phase microextraction; Volatile organic compounds

Indexed keywords

1 OCTEN 3 OL; ACETALDEHYDE; ALCOHOL; BENZALDEHYDE; BIOFUEL; BUTANOL; NONANAL; UNCLASSIFIED DRUG; VOLATILE ORGANIC COMPOUND;

ABIOTIC STRESS; ARTICLE; ASCOCORYNE SARCOIDES; ASCOMYCETES; BIOFUEL PRODUCTION; CONTROLLED STUDY; ENDOPHYTE; FUNGUS CULTURE; INTERMETHOD COMPARISON; MASS FRAGMENTOGRAPHY; MASS SPECTROMETRY; MEASUREMENT; NONHUMAN; PROTON TRANSPORT; QUANTITATIVE ANALYSIS; SOLID PHASE MICROEXTRACTION;

EID: 84863884516     PISSN: None     EISSN: 21910855     Source Type: Journal    
DOI: 10.1186/2191-0855-2-23     Document Type: Article

References (36)

1. Aprea E, Biasioli F, Carlin S, Endrizzi I, Gasperi F (2009) Investigation of Volatile Compounds in Two Raspberry Cultivars by Two Headspace Techniques: Solid-Phase Microextraction/Gas Chromatography Mass Spectrometry (SPME/GC MS) and Proton-Transfer Reaction Mass Spectrometry (PTR MS). J Agr Food Chem 57:4011-4018. doi:10.1021/jf803998c. doi:10.1021/jf803998c.
2. Aprea E, Biasioli F, Carlin S, Versini G, Märk TD, Gasperi F (2007) Rapid white truffle headspace analysis by proton transfer reaction mass spectrometry and comparison with solid-phase microextraction coupled with gas chromatography/mass spectrometry. Rapid Commun Mass Sp 21:2564-2572. doi:10.1002/rcm.3118. doi:10.1002/rcm.3118.
3. Arthur CL, Pawliszyn J (1990) Solid phase microextraction with thermal desorption using fused silica optical fibers. Anal Chem 62:2145-2148. doi:10.1021/ac00218a019. doi:10.1021/ac00218a019.
4. Bäck J, Aaltonen H, Hellén H, Kajos MK, Patokoski J, Taipale R, Pumpanen J, Heinonsalo J (2010) Variable emissions of microbial volatile organic compounds (MVOCs) from root-associated fungi isolated from Scots pine. Atmos Environ 44:3651-3659. doi:16/j.atmosenv.2010.06.042. doi:10.1016/j. atmosenv.2010.06.042.
5. Bajtarevic A, Ager C, Pienz M, Klieber M, Schwarz K, Ligor M, Ligor T, Filipiak W, Denz H, Fiegl M, Hilbe W, Weiss W, Lukas P, Jamnig H, Hackl M, Haidenberger A, Buszewski B, Miekisch W, Schubert J, Amann A (2009) Noninvasive detection of lung cancer by analysis of exhaled breath. BMC Cancer 9:348. doi:10.1186/1471-2407-9-348. doi:10.1186/1471-2407-9-348.
6. Bouvier-Brown NC, Holzinger R, Palitzsch K, Goldstein AH (2007) Quantifying sesquiterpene and oxygenated terpene emissions from live vegetation using solid-phase microextraction fibers. J Chromatogr A 1161:113-120. doi:16/j. chroma.2007.05.094. doi:10.1016/j.chroma.2007.05.094.
7. Brás I, Ratola N, Alves A (2011) Uncertainty in the quantification of pentachlorophenol in wood processing wastewaters by SPME-GC-MS. J Anal Chem 66:756-762. doi:10.1134/S1061934811080053. doi:10.1134/S1061934811080053.
8. Buhr K, van Ruth S, Delahunty C (2002) Analysis of volatile flavour compounds by Proton Transfer Reaction-Mass Spectrometry: fragmentation patterns and discrimination between isobaric and isomeric compounds. Int J Mass Spectrom 221:1-7. doi:10.1016/S1387-3806(02)00896-5. doi:10.1016/S1387-3806(02)00896-5.
9. Bunge M, Araghipour N, Mikoviny T, Dunkl J, Schnitzhofer R, Hansel A, Schinner F, Wisthaler A, Margesin R, Mark TD (2008) On-Line Monitoring of Microbial Volatile Metabolites by Proton Transfer Reaction-Mass Spectrometry. Appl Environ Microbiol 74:2179-2186. doi:10.1128/AEM.02069-07? doi:10.1128/AEM.02069-07.
10. Ezra D, Jasper J, Rogers T, Knighton B, Grimsrud E, Strobel G (2004) Proton transfer reaction-mass spectrometry as a technique to measure volatile emissions of Muscodor albus. Plant Sci 166:1471-1477. doi:16/j. plantsci.2004.01.022. doi:10.1016/j.plantsci.2004.01.022.
11. Griffin MA, Spakowicz DJ, Gianoulis TA, Strobel SA (2010) Volatile organic compound production by organisms in the genus Ascocoryne and a reevaluation of myco-diesel production by NRRL 50072. Microbiology 156:3814-3829. doi:10.1099/mic.0.041327-0. doi:10.1099/mic.0.041327-0.
12. Kai M, Crespo E, Cristescu SM, Harren FJM, Francke W, Piechulla B (2010) Serratia odorifera: analysis of volatile emission and biological impact of volatile compounds on Arabidopsis thaliana. Appl Microbiol Biotechnol 88:965-976. doi:10.1007/s00253-010-2810-1. doi:10.1007/s00253-010-2810-1.
13. Karl T, Yeretzian C, Jordan A, Lindinger W (2003) Dynamic measurements of partition coefficients using proton-transfer-reaction mass spectrometry (PTRMS). Int J Mass Spectrom 223-224:383-395. doi:10.1016/S1387-3806(02)00927-2
14. King J, Mochalski P, Kupferthaler A, Unterkofler K, Koc H, Filipiak W, Teschl S, Hinterhuber H, Amann A (2010) Dynamic profiles of volatile organic compounds in exhaled breath as determined by a coupled PTR-MS/GC-MS study. Physiol Meas 31:1169-1184. doi:10.1088/0967-3334/31/9/008. doi:10.1088/0967-3334/31/9/008.
15. Ladygina N, Dedyukhina EG, Vainshtein MB (2006) A review on microbial synthesis of hydrocarbons. Process Biochem 41:1001-1014. doi:10.1016/j. procbio.2005.12.007. doi:10.1016/j.procbio.2005.12.007.
16. Langenfeld JJ, Hawthorne SB, Miller DJ (1996) Quantitative Analysis of Fuel-Related Hydrocarbons in Surface Water and Wastewater Samples by Solid-Phase Microextraction. Anal Chem 68:144-155. doi:10.1021/ac950862w. doi:10.1021/ac950862w.
17. Lindinger W, Hansel A, Jordan A (1998) On-line monitoring of volatile organic compounds at pptv levels by means of proton-transfer-reaction mass spectrometry (PTR-MS) medical applications, food control and environmental research. Int J Mass Spectrom 173:191-241. doi:10.1016/S0168-1176(97)00281-4. doi:10.1016/S0168-1176(97)00281-4.
18. Linstrom PJ, Mallard WG (eds) (2011) NIST Chemistry WebBook, NIST Standard Reference Database Number 69. National Institute of Standards and Technology, Gaithersburg MD, 20899 http://webbook.nist.gov. Accessed 3 Oct 2011
19. Maleknia S, Bell T, Adams M (2007) PTR-MS analysis of reference and plantemitted volatile organic compounds. Int J Mass Spectrom 262:203-210. doi:10.1016/j.ijms.2006.11.010. doi:10.1016/j.ijms.2006.11.010.
20. Mallouchos A, Komaitis M, Koutinas A, Kanellaki M (2002) Investigation of Volatiles Evolution during the Alcoholic Fermentation of Grape Must Using Free and Immobilized Cells with the Help of Solid Phase Microextraction (SPME) Headspace Sampling. J Agr Food Chem 50:3840-3848. doi:10.1021/jf0116092. doi:10.1021/jf0116092.
21. Parkerton TF, Stone MA, Letinski DJ (2000) Assessing the aquatic toxicity of complex hydrocarbon mixtures using solid phase microextraction. Toxicol Lett 112-113:273-282. doi:16/S0378-4274(99)00237-4
22. Pawliszyn J (ed) (1999) Applications of solid phase microextraction. The Royal Society of Chemistry, Cambridge
23. Pawliszyn J (1997) Solid Phase Microextraction: Theory and Practice. Wiley-VCH, New York
24. Ramirez KS, Lauber CL, Fierer N (2009) Microbial consumption and production of volatile organic compounds at the soil-litter interface. Biogeochemistry 99:97-107. doi:10.1007/s10533-009-9393-x
25. Robinson AL, Boss PK, Heymann H, Solomon PS, Trengove RD (2011) Development of a sensitive non-targeted method for characterizing the wine volatile profile using headspace solid-phase microextraction comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry. J Chromatogr A 1218:504-517. doi:16/j.chroma.2010.11.008. doi:10.1016/j. chroma.2010.11.008.
26. Ruth V, M S, Lonneke D, Eugenio A, Sachiko O (2005) Comparison of Volatile Flavour Profiles of Kidney Beans and Soybeans by GC-MS and PTR-MS. Food Sci Technol Res 11:63-70. doi:10.3136/fstr.11.63.
27. Sander R (2011) "Henry's Law Constants" in NIST Chemistry WebBook, NIST Standard Reference Database Number 69. National Institute of Standards and Technology, Gaithersburg MD, 20899 http://webbook.nist.gov. Accessed 3 Oct 2011
28. Solomons TWG, Fryhle CB (2002) Organic Chemistry [Book]. Wiley, New York, New York
29. Steeghs M (2004) Proton-Transfer-Reaction Mass Spectrometry as a New Tool for Real Time Analysis of Root-Secreted Volatile Organic Compounds in Arabidopsis. Plant Physiol 135:47-58. doi:10.1104/pp. 104.038703. doi:10.1104/pp.104.038703.
30. Strobel GA, Knighton B, Kluck K, Ren Y, Livinghouse T, Griffin M, Spakowicz D, Sears J (2008) The production of myco-diesel hydrocarbons and their derivatives by the endophytic fungus Gliocladium roseum (NRRL 50072). Microbiology 154:3319-3328. doi:10.1099/mic.0.2008/022186-0. doi:10.1099/mic.0.2008/022186-0.
31. Strobel GA, Knighton B, Kluck K, Ren Y, Livinghouse T, Griffin M, Spakowicz D, Sears J (2010) The production of myco-diesel hydrocarbons and their derivatives by the endophytic fungus Gliocladium roseum (NRRL 50072). Microbiology 156:3830-3833. doi:10.1099/mic.0.30824-0. doi:10.1099/mic.0.30824-0.
32. Tomsheck AR, Strobel GA, Booth E, Geary B, Spakowicz D, Knighton B, Floerchinger C, Sears J, Liarzi O, Ezra D (2010) Hypoxylon sp., an Endophyte of Persea indica, Producing 1,8-Cineole and Other Bioactive Volatiles with Fuel Potential. Microb Ecol 60:903-914. doi:10.1007/s00248-010-9759-6. doi:10.1007/s00248-010-9759-6.
33. Weldegergis BT, Crouch AM, Górecki T, de Villiers A (2011) Solid phase extraction in combination with comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry for the detailed investigation of volatiles in South African red wines. Anal Chim Acta 701:98-111. doi:16/j. aca.2011.06.006. doi:10.1016/j.aca.2011.06.006.
34. Wercinski SAS (ed) (1999) Solid phase microextraction-a practical guide. CRC Press
35. Yaws CL (1999) Chemical Properties Handbook. McGraw-Hill
36. Zeng EY, Noblet JA (2002) Theoretical Considerations on the Use of Solid-Phase Microextraction with Complex Environmental Samples. Environ Sci Technol 36:3385-3392. doi:10.1021/es025653p. doi:10.1021/es025653p.