Ipomoelin, a Jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus

PLoS ONE

Volumn 7, Issue 7, 2012, Pages

  Chang, Wei Chieh ^a   Liu, Kai Lun ^a   Hsu, Fang Ciao ^a   Jeng, Shih Tong ^a   Cheng, Yi Sheng ^a  

^a NATIONAL TAIWAN UNIVERSITY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA METHYL MANNOSIDE; ALPHA METHYLGLUCOSIDE; CARBOHYDRATE; IPOMOELIN; METHYL ALPHA DEXTRO GALACTOPYRANOSIDE; PLANT LECTIN; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; BETA PRISM; BETA SHEET; BETA STRAND; BINDING AFFINITY; COMPLEX FORMATION; CRYSTAL STRUCTURE; GEL FILTRATION CHROMATOGRAPHY; ISOTHERMAL TITRATION CALORIMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT DEFENSE; PROTEIN ANALYSIS; PROTEIN CARBOHYDRATE INTERACTION; PROTEIN FAMILY; PROTEIN FOLDING; PROTEIN STRUCTURE; REGULATORY MECHANISM; STRUCTURE ACTIVITY RELATION;

AMINO ACID SEQUENCE; BINDING SITES; CARBOHYDRATE METABOLISM; CARBOHYDRATE SEQUENCE; CARBOHYDRATES; CHROMATOGRAPHY, GEL; CRYSTALLOGRAPHY, X-RAY; HYDROGEN BONDING; KINETICS; METHYLATION; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTANT PROTEINS; PLANT LECTINS; PLANT PROTEINS; PROTEIN BINDING; PROTEIN STRUCTURE, QUATERNARY; SEQUENCE ALIGNMENT; STRUCTURE-ACTIVITY RELATIONSHIP;

IPOMOEA BATATAS;

EID: 84863847022     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0040618     Document Type: Article

References (42)

1. Ponstein AS, Bres-Vloemans SA, Sela-Buurlage MB, van den Elzen PJ, Melchers LS, et al. (1994) A novel pathogen- and wound-inducible tobacco (Nicotiana tabacum) protein with antifungal activity. Plant Physiol 104: 109-118.
2. Wong JH, Ng TB, Cheung RC, Ye XJ, Wang HX, et al. (2010) Proteins with antifungal properties and other medicinal applications from plants and mushrooms. Appl Microbiol Biotechnol 87: 1221-1235.
3. Jiang JF, Han Y, Xing LJ, Xu YY, Xu ZH, et al. (2006) Cloning and expression of a novel cDNA encoding a mannose-specific jacalin-related lectin from Oryza sativa. Toxicon 47: 133-139.
4. Zhang W, Peumans WJ, Barre A, Astoul CH, Rovira P, et al. (2000) Isolation and characterization of a jacalin-related mannose-binding lectin from salt-stressed rice (Oryza sativa) plants. Planta 210: 970-978.
5. Peumans WJ, Van Damme EJ, (1995) Lectins as plant defense proteins. Plant Physiol 109: 347-352.
6. Varki A, (2009) Essentials of glycobiology. Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press. xxix, 784 p. p.
7. Chrispeels MJ, Raikhel NV, (1991) Lectins, Lectin Genes, and Their Role in Plant Defense. Plant Cell 3: 1-9.
8. Hwang IS, Hwang BK, (2011) The pepper mannose-binding lectin gene CaMBL1 is required to regulate cell death and defense responses to microbial pathogens. Plant Physiol 155: 447-463.
9. Ma QH, Tian B, Li YL, (2010) Overexpression of a wheat jasmonate-regulated lectin increases pathogen resistance. Biochimie 92: 187-193.
10. Chen YC, Chang HS, Lai HM, Jeng ST, (2005) Characterization of the wound-inducible protein ipomoelin from sweet potato. Plant Cell Environ 28: 251-259.
11. Miyake K, Tanaka T, McNeil PL, (2007) Lectin-based food poisoning: a new mechanism of protein toxicity. PLoS One 2: e687.
12. Vasconcelos IM, Oliveira JT, (2004) Antinutritional properties of plant lectins. Toxicon 44: 385-403.
13. Swanson MD, Winter HC, Goldstein IJ, Markovitz DM, (2010) A lectin isolated from bananas is a potent inhibitor of HIV replication. J Biol Chem 285: 8646-8655.
14. Keyaerts E, Vijgen L, Pannecouque C, Van Damme E, Peumans W, et al. (2007) Plant lectins are potent inhibitors of coronaviruses by interfering with two targets in the viral replication cycle. Antiviral Res 75: 179-187.
15. Balzarini J, Hatse S, Vermeire K, Princen K, Aquaro S, et al. (2004) Mannose-specific plant lectins from the Amaryllidaceae family qualify as efficient microbicides for prevention of human immunodeficiency virus infection. Antimicrob Agents Chemother 48: 3858-3870.
16. Balzarini J, Neyts J, Schols D, Hosoya M, Van Damme E, et al. (1992) The mannose-specific plant lectins from Cymbidium hybrid and Epipactis helleborine and the (N-acetylglucosamine)n-specific plant lectin from Urtica dioica are potent and selective inhibitors of human immunodeficiency virus and cytomegalovirus replication in vitro. Antiviral Res 18: 191-207.
17. Ziolkowska NE, O'Keefe BR, Mori T, Zhu C, Giomarelli B, et al. (2006) Domain-swapped structure of the potent antiviral protein griffithsin and its mode of carbohydrate binding. Structure 14: 1127-1135.
18. Van Damme EJ, Barre A, Rouge P, Peumans WJ, (2004) Cytoplasmic/nuclear plant lectins: a new story. Trends Plant Sci 9: 484-489.
19. Peumans WJ, Hause B, Van Damme EJ, (2000) The galactose-binding and mannose-binding jacalin-related lectins are located in different sub-cellular compartments. FEBS Lett 477: 186-192.
20. Schouppe D, Ghesquiere B, Menschaert G, De Vos WH, Bourque S, et al. (2011) Interaction of the tobacco lectin with histone proteins. Plant Physiol 155: 1091-1102.
21. Sankaranarayanan R, Sekar K, Banerjee R, Sharma V, Surolia A, et al. (1996) A novel mode of carbohydrate recognition in jacalin, a Moraceae plant lectin with a beta-prism fold. Nat Struct Biol 3: 596-603.
22. Lee X, Thompson A, Zhang Z, Ton-that H, Biesterfeldt J, et al. (1998) Structure of the complex of Maclura pomifera agglutinin and the T-antigen disaccharide, Galbeta1,3GalNAc. J Biol Chem 273: 6312-6318.
23. Pratap JV, Jeyaprakash AA, Rani PG, Sekar K, Surolia A, et al. (2002) Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity. J Mol Biol 317: 237-247.
24. Rabijns A, Barre A, Van Damme EJ, Peumans WJ, De Ranter CJ, et al. (2005) Structural analysis of the jacalin-related lectin MornigaM from the black mulberry (Morus nigra) in complex with mannose. FEBS J 272: 3725-3732.
25. Kanagawa M, Satoh T, Ikeda A, Nakano Y, Yagi H, et al. (2011) Crystal structures of human secretory proteins ZG16p and ZG16b reveal a Jacalin-related beta-prism fold. Biochem Biophys Res Commun 404: 201-205.
26. Bourne Y, Zamboni V, Barre A, Peumans WJ, Van Damme EJM, et al. (1999) Helianthus tuberosus lectin reveals a widespread scaffold for mannose-binding lectins. Structure 7: 1473-1482.
27. Bourne Y, Roig-Zamboni V, Barre A, Peumans WJ, Astoul CH, et al. (2004) The crystal structure of the Calystegia sepium agglutinin reveals a novel quaternary arrangement of lectin subunits with a beta-prism fold. J Biol Chem 279: 527-533.
28. Gallego del Sol F, Nagano C, Cavada BS, Calvete JJ, (2005) The first crystal structure of a Mimosoideae lectin reveals a novel quaternary arrangement of a widespread domain. J Mol Biol 353: 574-583.
29. Imanishi S, Kito-Nakamura K, Matsuoka K, Morikami A, Nakamura K, (1997) A major jasmonate-inducible protein of sweet potato, ipomoelin, is an ABA-independent wound-inducible protein. Plant Cell Physiol 38: 643-652.
30. Jih PJ, Chen YC, Jeng ST, (2003) Involvement of hydrogen peroxide and nitric oxide in expression of the ipomoelin gene from sweet potato. Plant Physiol 132: 381-389.
31. Kawabata T, (2003) MATRAS: A program for protein 3D structure comparison. Nucleic Acids Res 31: 3367-3369.
32. Meagher JL, Winter HC, Ezell P, Goldstein IJ, Stuckey JA, (2005) Crystal structure of banana lectin reveals a novel second sugar binding site. Glycobiology 15: 1033-1042.
33. Jeyaprakash AA, Katiyar S, Swaminathan CP, Sekar K, Surolia A, et al. (2003) Structural basis of the carbohydrate specificities of jacalin: an X-ray and modeling study. J Mol Biol 332: 217-228.
34. Krissinel E, Henrick K, (2007) Inference of macromolecular assemblies from crystalline state. J Mol Biol 372: 774-797.
35. Rani PG, Bachhawat K, Misquith S, Surolia A, (1999) Thermodynamic studies of saccharide binding to artocarpin, a B-cell mitogen, reveals the extended nature of its interaction with mannotriose [3,6-Di-O-(alpha-D-mannopyranosyl)-D-mannose]. J Biol Chem 274: 29694-29698.
36. Mo H, Winter HC, Van Damme EJ, Peumans WJ, Misaki A, et al. (2001) Carbohydrate binding properties of banana (Musa acuminata) lectin I. Novel recognition of internal alpha1,3-linked glucosyl residues. Eur J Biochem 268: 2609-2615.
37. Arockia Jeyaprakash A, Jayashree G, Mahanta SK, Swaminathan CP, Sekar K, et al. (2005) Structural basis for the energetics of jacalin-sugar interactions: promiscuity versus specificity. J Mol Biol 347: 181-188.
38. Otwinowski Z, Minor W, Charles W Carter Jr, (1997) [20] Processing of X-ray diffraction data collected in oscillation mode. Methods in Enzymology: Academic Press pp. 307-326.
39. Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 54: 905-921.
40. Emsley P, Cowtan K, (2004) Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 60: 2126-2132.
41. Guex N, Peitsch MC, (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18: 2714-2723.
42. DeLano WL, (2009) The PyMOL Molecular Graphics System. Palo Alto, California, USA.: DeLano Scientific LLC. PyMOL website. Available:http://www.pymol.org. Accessed 2012 Jun 15.