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Volumn 184, Issue 1-2, 2012, Pages 34-40

A high-throughput assay for HIV-1 integrase 3'-processing activity using time-resolved fluorescence

Author keywords

3' Processing; HIV 1 integrase; Integrase inhibitors; Time resolved fluorescence

Indexed keywords

INTEGRASE; INTEGRASE INHIBITOR; METAL ION; OLIGONUCLEOTIDE; VIRUS DNA;

EID: 84863832436     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2012.05.003     Document Type: Article
Times cited : (15)

References (29)
  • 1
    • 0036270557 scopus 로고    scopus 로고
    • Inhibition of HIV-1 integrase by galloyl glucoses from Terminalia chebula and flavonol glycoside gallates from Euphorbia pekinensis
    • Ahn M.J., Kim C.Y., Lee J.S., Kim T.G., Kim S.H., Lee C.K., Lee B.B., Shin C.G., Huh H., Kim J. Inhibition of HIV-1 integrase by galloyl glucoses from Terminalia chebula and flavonol glycoside gallates from Euphorbia pekinensis. Planta Medica 2002, 68:457-459.
    • (2002) Planta Medica , vol.68 , pp. 457-459
    • Ahn, M.J.1    Kim, C.Y.2    Lee, J.S.3    Kim, T.G.4    Kim, S.H.5    Lee, C.K.6    Lee, B.B.7    Shin, C.G.8    Huh, H.9    Kim, J.10
  • 3
    • 0030471086 scopus 로고    scopus 로고
    • Application of the electrotopological state index to QSAR analysis of flavone derivatives as HIV-1 integrase inhibitors
    • Buolamwini J.K., Raghavan K., Fesen M.R., Pommier Y., Kohn K.W., Weinstein J.N. Application of the electrotopological state index to QSAR analysis of flavone derivatives as HIV-1 integrase inhibitors. Pharmaceutical Research 1996, 13:1892-1895.
    • (1996) Pharmaceutical Research , vol.13 , pp. 1892-1895
    • Buolamwini, J.K.1    Raghavan, K.2    Fesen, M.R.3    Pommier, Y.4    Kohn, K.W.5    Weinstein, J.N.6
  • 4
    • 0033899984 scopus 로고    scopus 로고
    • Characterization of a replication-defective human immunodeficiency virus type 1 at site mutant that is blocked after the 3' processing step of retroviral integration
    • Chen H., Engelman A. Characterization of a replication-defective human immunodeficiency virus type 1 at site mutant that is blocked after the 3' processing step of retroviral integration. Journal of Virology 2000, 74:8188-8193.
    • (2000) Journal of Virology , vol.74 , pp. 8188-8193
    • Chen, H.1    Engelman, A.2
  • 7
    • 0029033548 scopus 로고
    • Ultrasensitive bioanalytical assays using time-resolved fluorescence detection
    • Dickson E.F., Pollak A., Diamandis E.P. Ultrasensitive bioanalytical assays using time-resolved fluorescence detection. Pharmacology & Therapeutics 1995, 66:207-235.
    • (1995) Pharmacology & Therapeutics , vol.66 , pp. 207-235
    • Dickson, E.F.1    Pollak, A.2    Diamandis, E.P.3
  • 8
    • 0026649557 scopus 로고
    • Identification of conserved amino acid residues critical for human immunodeficiency virus type 1 integrase function in vitro
    • Engelman A., Craigie R. Identification of conserved amino acid residues critical for human immunodeficiency virus type 1 integrase function in vitro. Journal of Virology 1992, 66:6361-6369.
    • (1992) Journal of Virology , vol.66 , pp. 6361-6369
    • Engelman, A.1    Craigie, R.2
  • 11
    • 0028070994 scopus 로고
    • Inhibition of HIV-1 integrase by flavones, caffeic acid phenethyl ester (CAPE) and related compounds
    • Fesen M.R., Pommier Y., Leteurtre F., Hiroguchi S., Yung J., Kohn K.W. Inhibition of HIV-1 integrase by flavones, caffeic acid phenethyl ester (CAPE) and related compounds. Biochemical Pharmacology 1994, 48:595-608.
    • (1994) Biochemical Pharmacology , vol.48 , pp. 595-608
    • Fesen, M.R.1    Pommier, Y.2    Leteurtre, F.3    Hiroguchi, S.4    Yung, J.5    Kohn, K.W.6
  • 13
    • 0029118594 scopus 로고
    • Incorporation of a fluorescent guanosine analog into oligonucleotides and its application to a real time assay for the HIV-1 integrase 3'-processing reaction
    • Hawkins M.E., Pfleiderer W., Mazumder A., Pommier Y.G., Balis F.M. Incorporation of a fluorescent guanosine analog into oligonucleotides and its application to a real time assay for the HIV-1 integrase 3'-processing reaction. Nucleic Acids Research 1995, 23:2872-2880.
    • (1995) Nucleic Acids Research , vol.23 , pp. 2872-2880
    • Hawkins, M.E.1    Pfleiderer, W.2    Mazumder, A.3    Pommier, Y.G.4    Balis, F.M.5
  • 14
  • 15
    • 34249305211 scopus 로고    scopus 로고
    • High-throughput real-time assay based on molecular beacons for HIV-1 integrase 3'-processing reaction
    • He H.Q., Ma X.H., Liu B., Zhang X.Y., Chen W.Z., Wang C.X., Cheng S.H. High-throughput real-time assay based on molecular beacons for HIV-1 integrase 3'-processing reaction. Acta Pharmacologica Sinica 2007, 28:811-817.
    • (2007) Acta Pharmacologica Sinica , vol.28 , pp. 811-817
    • He, H.Q.1    Ma, X.H.2    Liu, B.3    Zhang, X.Y.4    Chen, W.Z.5    Wang, C.X.6    Cheng, S.H.7
  • 16
    • 24944583304 scopus 로고    scopus 로고
    • Development and application of a high-throughput screening assay for HIV-1 integrase enzyme activities
    • John S., Fletcher T.M.III, Jonsson C.B. Development and application of a high-throughput screening assay for HIV-1 integrase enzyme activities. Journal of Biomolecular Screening 2005, 10:606-614.
    • (2005) Journal of Biomolecular Screening , vol.10 , pp. 606-614
    • John, S.1    Fletcher III, T.M.2    Jonsson, C.B.3
  • 18
    • 79952070221 scopus 로고    scopus 로고
    • Structural biology of retroviral DNA integration
    • Li X., Krishnan L., Cherepanov P., Engelman A. Structural biology of retroviral DNA integration. Virology 2011, 411:194-205.
    • (2011) Virology , vol.411 , pp. 194-205
    • Li, X.1    Krishnan, L.2    Cherepanov, P.3    Engelman, A.4
  • 20
    • 64649093335 scopus 로고    scopus 로고
    • Oligonucleotide-based assays for integrase activity
    • Merkel G., Andrakea M.D., Ramcharan J., Skalka A.M. Oligonucleotide-based assays for integrase activity. Methods 2009, 47:243-248.
    • (2009) Methods , vol.47 , pp. 243-248
    • Merkel, G.1    Andrakea, M.D.2    Ramcharan, J.3    Skalka, A.M.4
  • 21
    • 0030972160 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 preintegration complexes: studies of organization and composition
    • Miller M.D., Farnet C.M., Bushman F.D. Human immunodeficiency virus type 1 preintegration complexes: studies of organization and composition. Journal of Virology 1997, 71:5382-5390.
    • (1997) Journal of Virology , vol.71 , pp. 5382-5390
    • Miller, M.D.1    Farnet, C.M.2    Bushman, F.D.3
  • 22
    • 79955398402 scopus 로고    scopus 로고
    • Sequential deletion of the integrase (Gag-Pol) carboxyl terminus reveals distinct phenotypic classes of defective HIV-1
    • Mohammed K., Topper M., Muesing M. Sequential deletion of the integrase (Gag-Pol) carboxyl terminus reveals distinct phenotypic classes of defective HIV-1. Journal of Virology 2011, 85:4654-4666.
    • (2011) Journal of Virology , vol.85 , pp. 4654-4666
    • Mohammed, K.1    Topper, M.2    Muesing, M.3
  • 24
    • 0028924311 scopus 로고
    • Three-dimensional quantitative structure-activity relationship (QSAR) of HIV integrase inhibitors: a comparative molecular field analysis (CoMFA) study
    • Raghavan K., Buolamwini J.K., Fesen M.R., Pommier Y., Kohn K.W., Weinstein J.N. Three-dimensional quantitative structure-activity relationship (QSAR) of HIV integrase inhibitors: a comparative molecular field analysis (CoMFA) study. Journal of Medicinal Chemistry 1995, 38:890-897.
    • (1995) Journal of Medicinal Chemistry , vol.38 , pp. 890-897
    • Raghavan, K.1    Buolamwini, J.K.2    Fesen, M.R.3    Pommier, Y.4    Kohn, K.W.5    Weinstein, J.N.6
  • 25
    • 33644760700 scopus 로고    scopus 로고
    • Kinetic study of the HIV-1 DNA 3'-end processing single-turnover property of integrase
    • Smolov M., Gottikh M., Tashlitskii V., Korolev S., Demidyuk I., Brochon J.C., et al. Kinetic study of the HIV-1 DNA 3'-end processing single-turnover property of integrase. FEBS Journal 2006, 273:1137-1151.
    • (2006) FEBS Journal , vol.273 , pp. 1137-1151
    • Smolov, M.1    Gottikh, M.2    Tashlitskii, V.3    Korolev, S.4    Demidyuk, I.5    Brochon, J.C.6
  • 26
    • 1842685176 scopus 로고    scopus 로고
    • The use of a new in vitro reaction substrate reproducing both U3 and U5 regions of the HIV-1 3'-end increases the correlation between the in vitro and in vivo effects of the HIV-1 integrase inhibitors
    • Tramontano E., Onidi L., Esposito F., Badas R., Colla P.L. The use of a new in vitro reaction substrate reproducing both U3 and U5 regions of the HIV-1 3'-end increases the correlation between the in vitro and in vivo effects of the HIV-1 integrase inhibitors. Biochemical Pharmacology 2004, 67:1751-1761.
    • (2004) Biochemical Pharmacology , vol.67 , pp. 1751-1761
    • Tramontano, E.1    Onidi, L.2    Esposito, F.3    Badas, R.4    Colla, P.L.5
  • 27
    • 0028238134 scopus 로고
    • A high-throughput, non-radioactive microtiter plate assay for activity of the human immunodeficiency virus integrase protein
    • Vink C., Banks M., Bethell R., Plasterk R.H. A high-throughput, non-radioactive microtiter plate assay for activity of the human immunodeficiency virus integrase protein. Nucleic Acids Research 1994, 22:2176-2177.
    • (1994) Nucleic Acids Research , vol.22 , pp. 2176-2177
    • Vink, C.1    Banks, M.2    Bethell, R.3    Plasterk, R.H.4
  • 28
    • 24144501087 scopus 로고    scopus 로고
    • Homogeneous high-throughput screening assays for HIV-1 integrase 3'-processing and strand transfer activities
    • Wang Y., Klock H., Yin H., Wolff K., Bieza K., Niswonger K., et al. Homogeneous high-throughput screening assays for HIV-1 integrase 3'-processing and strand transfer activities. Journal of Biomolecular Screening 2005, 10:456-462.
    • (2005) Journal of Biomolecular Screening , vol.10 , pp. 456-462
    • Wang, Y.1    Klock, H.2    Yin, H.3    Wolff, K.4    Bieza, K.5    Niswonger, K.6
  • 29
    • 0033003760 scopus 로고    scopus 로고
    • A simple statistical parameter for use in evaluation and validation of high throughput screening assays
    • Zhang J.H., Chung T.D., Oldenburg K.R. A simple statistical parameter for use in evaluation and validation of high throughput screening assays. Journal of Biomolecular Screening 1999, 4:67-73.
    • (1999) Journal of Biomolecular Screening , vol.4 , pp. 67-73
    • Zhang, J.H.1    Chung, T.D.2    Oldenburg, K.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.