Volumetric navigators for prospective motion correction and selective reacquisition in neuroanatomical MRI

Magnetic Resonance in Medicine

Volumn 68, Issue 2, 2012, Pages 389-399

  Tisdall, M Dylan ^a,b   Hess, Aaron T ^c   Reuter, Martin ^a,b,d   Meintjes, Ernesta M ^c   Fischl, Bruce ^a,b,d   Van Der Kouwe, André J W ^a,b  

^a MASSACHUSETTS GENERAL HOSPITAL   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

^c UNIVERSITY OF CAPE TOWN   (South Africa)

^d MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

brain morphometry; navigator; prospective motion correction; validation

Indexed keywords

NEUROIMAGING;

COMPLETE SYSTEM; ECHO PLANAR IMAGING; EXTERNAL CALIBRATION; HIGH THROUGHPUT; MORPHOMETRY; MOTION CORRECTION; NAVIGATOR; VALIDATION;

SCANNING;

CONTRAST ENHANCEMENT; ECHO PLANAR IMAGING; HUMAN; MOTION ANALYSIS SYSTEM; NEUROIMAGING; PROSPECTIVE MOTION CORRECTION; REVIEW; SIGNAL NOISE RATIO; THREE DIMENSIONAL IMAGING; VOXEL BASED MORPHOMETRY;

EID: 84863817459     PISSN: 07403194     EISSN: 15222594     Source Type: Journal    
DOI: 10.1002/mrm.23228     Document Type: Review

References (35)

1. Atkinson D, Hill D, Stoyle P, Summers P, Keevil S,. Automatic correction of motion artifacts in magnetic resonance images using an entropy focus criterion. IEEE Trans Med Imaging 1997; 16: 903-910. (Pubitemid 127770449)
2. Pipe JG,. Motion correction with propeller MRI: application to head motion and free-breathing cardiac imaging. Magn Reson Med 1999; 42: 963-969. (Pubitemid 29521487)
3. Bydder M, Larkman DJ, Hajnal JV,. Detection and elimination of motion artifacts by regeneration of k-space. Magn Reson Med 2002; 47: 677-686. (Pubitemid 34263780)
4. Liu C, Bammer R, Kim D-H, Moseley ME,. Self-navigated interleaved spiral (snails): application to high-resolution diffusion tensor imaging. Magn Reson Med 2004; 52: 1388-1396. (Pubitemid 39612828)
5. Thesen S, Heid O, Mueller E, Schad LR,. Prospective acquisition correction for head motion with image-based tracking for real-time fMRI. Magn Reson Med 2000; 44: 457-465.
6. Ward HA, Riederer SJ, Grimm RC, Ehman RL, Felmlee JP, Jack CR,. Prospective multiaxial motion correction for fMRI. Magn Reson Med 2000; 43: 459-469. (Pubitemid 30127534)
7. Welch EB, Manduca A, Grimm RC, Ward HA, Jack CR,. Spherical navigator echoes for full 3d rigid body motion measurement in MRI. Magn Reson Med 2002; 47: 32-41. (Pubitemid 34019690)
8. van der Kouwe AJW, Benner T, Dale AM,. Real-time rigid body motion correction and shimming using cloverleaf navigators. Magn Reson Med 2006; 56: 1019-1032. (Pubitemid 44691344)
9. Ooi MB, Krueger S, Thomas WJ, Swaminathan SV, Brown TR,. Prospective real-time correction for arbitrary head motion using active markers. Magn Reson Med 2009; 62: 943-954.
10. White N, Roddey C, Shankaranarayanan A, Han E, Rettmann D, Santos J, Kuperman J, Dale A,. Promo: real-time prospective motion correction in MRI using image-based tracking. Magn Reson Med 2010; 63: 91-105.
11. Brown TT, Kuperman JM, Erhart M, White NS, Roddey JC, Shankaranarayanan A, Han ET, Rettmann D, Dale AM,. Prospective motion correction of high-resolution magnetic resonance imaging data in children. Neuroimage 2010; 53: 139-145.
12. Keating B, Deng W, Roddey JC, White N, Dale A, Stenger VA, Ernst T,. Prospective motion correction for single-voxel 1 h MR spectroscopy. Magn Reson Med 2010; 64: 672-679.
13. Liu J, Drangova M,. Rapid six-degree-of-freedom motion detection using prerotated baseline spherical navigator echoes. Magn Reson Med 2010; 65: 506-514.
14. Hess AT, Tisdall MD, Andronesi OC, Meintjes EM, van der Kouwe AJW,. Real-time motion and b0 corrected single voxel spectroscopy using volumetric navigators. Magn Reson Med 2011; 66: 314-323.
15. Maclaren J, Lee KJ, Luengviriya C, Speck O, Zaitsev M,. Combined prospective and retrospective motion correction to relax navigator requirements. Magn Reson Med 2011; 65: 1724-1732.
16. Friston KJ, Frith CD, Frackowiak RS, Turner R,. Characterizing dynamic brain responses with fmri: a multivariate approach. Neuroimage 1995; 2: 166-172.
17. Jiang A, Kennedy DN, Baker JR, Weisskoff RM, Tootell RBH, Woods RP, Benson RR, Kwong KK, Brady TJ, Rosen BR, Belliveau JW,. Motion detection and correction in functional MR imaging. Hum Brain Mapp 1995; 3: 224-235. (Pubitemid 3036545)
18. Jenkinson M, Bannister P, Brady M, Smith S,. Improved optimization for the robust and accurate linear registration and motion correction of brain images. Neuroimage 2002; 17: 825-841. (Pubitemid 35317016)
19. Qin L, van Gelderen P, Derbyshire JA, Jin F, Lee J, de Zwart JA, Tao Y, Duyn JH,. Prospective head-movement correction for high-resolution MRI using an in-bore optical tracking system. Magn Reson Med 2009; 62: 924-934.
20. van der Kouwe AJW, Benner T, Salat DH, Fischl B,. Brain morphometry with multiecho mprage. Neuroimage 2008; 40: 559-569.
21. Reuter M, Rosas HD, Fischl B,. Highly accurate inverse consistent registration: a robust approach. Neuroimage 2010; 53: 1181-1196.
22. Reuter M, Fischl B,. Avoiding asymmetry-induced bias in longitudinal image processing. Neuroimage 2011; 57: 19-21.
23. Dale A, Fischl B, Sereno MI,. Cortical surface-based analysis. i. Segmentation and surface reconstruction. Neuroimage 1999; 9: 179-194. (Pubitemid 29369874)
24. Fischl B, Dale AM,. Measuring the thickness of the human cerebral cortex from magnetic resonance images. Proc Nat Acad Sci USA 2000; 97: 11050-11055.
25. Fischl B, Liu A, Dale AM,. Automated manifold surgery: constructing geometrically accurate and topologically correct models of the human cerebral cortex. IEEE Med Imaging 2001; 20: 70-80. (Pubitemid 32293421)
26. Fischl B, Salat DH, Busa E, Albert M, Dieterich M, Haselgrove C, van der Kouwe A, Killiany R, Kennedy D, Klaveness S, Montillo A, Makris N, Rosen B, Dale AM,. Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. Neuron 2002; 33: 341-355. (Pubitemid 34162530)
27. Fischl B, van der Kouwe A, Destrieux C, Halgren E, Ségonne F, Salat DH, Busa E, Seidman LJ, Goldstein J, Kennedy D, Caviness V, Makris N, Rosen B, Dale AM,. Automatically parcellating the human cerebral cortex. Cereb Cortex 2004; 14: 11-22. (Pubitemid 38018050)
28. Fischl B, Sereno MI, Tootell RB, Dale AM,. High-resolution intersubject averaging and a coordinate system for the cortical surface. Hum Brain Mapp 1999; 8: 272-284.
29. Fischl B, Sereno MI, Dale A,. Cortical surface-based analysis. II: inflation, flattening, and a surface-based coordinate system. Neuroimage 1999; 9: 195-207. (Pubitemid 29369875)
30. Fischl B, Salat DH, van der Kouwe AJ, Makris N, Ségonne F, Quinn BT, Dale AM,. Sequence-independent segmentation of magnetic resonance images. Neuroimage 2004; 23 (Suppl 1): S69-S84. (Pubitemid 39429376)
31. Han X, Jovicich J, Salat D, van der Kouwe A, Quinn B, Czanner S, Busa E, Pacheco J, Albert M, Killiany R, Maguire P, Rosas D, Makris N, Dale A, Dickerson B, Fischl B,. Reliability of MRI-derived measurements of human cerebral cortical thickness: The effects of field strength, scanner upgrade, and manufacturer. Neuroimage 2006; 32: 180-194.
32. Jovicich J, Czanner S, Greve D, Haley E, van der Kouwe A, Gollub R, Kennedy D, Schmitt F, Brown G, MacFall J, Fischl B, Dale A,. Reliability in multi-site structural MRI studies: effects of gradient nonlinearity correction on phantom and human data. Neuroimage 2006; 30: 436-443.
33. Segonne F, Dale AM, Busa E, Glessner M, Salat D, Hahn HK, Fischl B,. A hybrid approach to the skull stripping problem in MRI. Neuroimage 2004; 22: 1060-1075. (Pubitemid 38829195)
34. Greve DN, Fischl B,. Accurate and robust brain image alignment using boundary-based registration. Neuroimage 2009; 48: 63-72.
35. Crum W, Camara O, Hill D,. Generalized overlap measures for evaluation and validation in medical image analysis. IEEE Trans Med Imaging 2006; 25: 1451-1461. (Pubitemid 44711693)