-
1
-
-
33847638020
-
Eicosanoids in inflammation: Biosynthesis, pharmacology, and therapeutic frontiers
-
DOI 10.2174/156802607779941314
-
Khanapure, S. P., Garvey, D. S., Janero, D. R., and Letts, L. G. (2007) Eicosanoids in inflammation: Biosynthesis, pharmacology, and therapeutic frontiers. Curr. Top. Med. Chem. 7, 311-340 (Pubitemid 46358664)
-
(2007)
Current Topics in Medicinal Chemistry
, vol.7
, Issue.3
, pp. 311-340
-
-
Khanapure, S.P.1
Garvey, D.S.2
Janero, D.R.3
Letts, L.G.4
-
2
-
-
47949099098
-
Origin and physiological roles of inflammation
-
Medzhitov, R. (2008) Origin and physiological roles of inflammation. Nature 454, 428-435
-
(2008)
Nature
, vol.454
, pp. 428-435
-
-
Medzhitov, R.1
-
3
-
-
77950345093
-
Inflammation 2010: New adventures of an old flame
-
Medzhitov, R. (2010) Inflammation 2010: New adventures of an old flame. Cell 140, 771-776
-
(2010)
Cell
, vol.140
, pp. 771-776
-
-
Medzhitov, R.1
-
4
-
-
67650531422
-
Thematic review series: Proteomics. An integrated omics analysis of eicosanoid biology
-
Buczynski, M. W., Dumlao, D. S., and Dennis, E. A. (2009) Thematic review series: Proteomics. An integrated omics analysis of eicosanoid biology. J. Lipid Res. 50, 1015-1038
-
(2009)
J. Lipid Res.
, vol.50
, pp. 1015-1038
-
-
Buczynski, M.W.1
Dumlao, D.S.2
Dennis, E.A.3
-
5
-
-
34047252520
-
Arachidonate-derived dihomoprostaglandin production observed in endotoxin-stimulated macrophage-like cells
-
DOI 10.1074/jbc.M610067200
-
Harkewicz, R., Fahy, E., Andreyev, A., and Dennis, E. A. (2007) Arachidonate-derived dihomoprostaglandin production observed in endotoxin-stimulated macrophage-like cells. J. Biol. Chem. 282, 2899-2910 (Pubitemid 47084335)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.5
, pp. 2899-2910
-
-
Harkewicz, R.1
Fahy, E.2
Andreyev, A.3
Dennis, E.A.4
-
6
-
-
34547928769
-
TLR-4 and sustained calcium agonists synergistically produce eicosanoids independent of protein synthesis in RAW264.7 cells
-
DOI 10.1074/jbc.M701831200
-
Buczynski, M. W., Stephens, D. L., Bowers-Gentry, R. C., Grkovich, A., Deems, R. A., and Dennis, E. A. (2007) TLR-4 and sustained calcium agonists synergistically produce eicosanoids independent of protein synthesis in RAW264.7 cells. J. Biol. Chem. 282, 22834-22847 (Pubitemid 47267374)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.31
, pp. 22834-22847
-
-
Buczynski, M.W.1
Stephens, D.L.2
Bowers-Gentry, R.C.3
Grkovich, A.4
Deems, R.A.5
Dennis, E.A.6
-
7
-
-
33646804835
-
2-Lipid A of Escherichia coli, a defined endotoxin that activates macrophages via TLR-4
-
DOI 10.1194/jlr.M600027-JLR200
-
Raetz, C. R., Garrett, T. A., Reynolds, C. M., Shaw, W. A., Moore, J. D., Smith, D. C., Jr., Ribeiro, A. A., Murphy, R. C., Ulevitch, R. J., Fearns, C., Reichart, D., Glass, C. K., Benner, C., Subramaniam, S., Harkewicz, R., Bowers-Gentry, R. C., Buczynski, M. W., Cooper, J. A., Deems, R. A., and Dennis, E. A. (2006) Kdo2-Lipid A of Escherichia coli, a defined endotoxin that activates macrophages via TLR-4. J. Lipid Res. 47, 1097-1111 (Pubitemid 43764706)
-
(2006)
Journal of Lipid Research
, vol.47
, Issue.5
, pp. 1097-1111
-
-
Raetz, C.R.H.1
Garrett, T.A.2
Reynolds, C.M.3
Shaw, W.A.4
Moore, J.D.5
Smith Jr., D.C.6
Ribeiro, A.A.7
Murphy, R.C.8
Ulevitch, R.J.9
Fearns, C.10
Reichart, D.11
Glass, C.K.12
Benner, C.13
Subramaniam, S.14
Harkewicz, R.15
Bowers-Gentry, R.C.16
Buczynski, M.W.17
Cooper, J.A.18
Deems, R.A.19
Dennis, E.A.20
more..
-
8
-
-
68949086653
-
An integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis
-
Gupta, S., Maurya, M. R., Stephens, D. L., Dennis, E. A., and Subramaniam, S. (2009) An integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis. Biophys. J. 96, 4542-4551
-
(2009)
Biophys. J.
, vol.96
, pp. 4542-4551
-
-
Gupta, S.1
Maurya, M.R.2
Stephens, D.L.3
Dennis, E.A.4
Subramaniam, S.5
-
9
-
-
78649685767
-
A mouse macrophage lipidome
-
Dennis, E. A., Deems, R. A., Harkewicz, R., Quehenberger, O., Brown, H. A., Milne, S. B., Myers, D. S., Glass, C. K., Hardiman, G., Reichart, D., Merrill, A. H., Jr., Sullards, M. C., Wang, E., Murphy, R. C., Raetz, C. R., Garrett, T. A., Guan, Z., Ryan, A. C., Russell, D. W., McDonald, J. G., Thompson, B. M., Shaw, W. A., Sud, M., Zhao, Y., Gupta, S., Maurya, M. R., Fahy, E., and Subramaniam, S. (2010) A mouse macrophage lipidome. J. Biol. Chem. 285, 39976-39985
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 39976-39985
-
-
Dennis, E.A.1
Deems, R.A.2
Harkewicz, R.3
Quehenberger, O.4
Brown, H.A.5
Milne, S.B.6
Myers, D.S.7
Glass, C.K.8
Hardiman, G.9
Reichart, D.10
Merrill Jr., A.H.11
Sullards, M.C.12
Wang, E.13
Murphy, R.C.14
Raetz, C.R.15
Garrett, T.A.16
Guan, Z.17
Ryan, A.C.18
Russell, D.W.19
McDonald, J.G.20
Thompson, B.M.21
Shaw, W.A.22
Sud, M.23
Zhao, Y.24
Gupta, S.25
Maurya, M.R.26
Fahy, E.27
Subramaniam, S.28
more..
-
10
-
-
74049131716
-
High-throughput generation of selected reaction-monitoring assays for proteins and proteomes
-
Picotti, P., Rinner, O., Stallmach, R., Dautel, F., Farrah, T., Domon, B., Wenschuh, H., and Aebersold, R. (2010) High-throughput generation of selected reaction-monitoring assays for proteins and proteomes. Nat. Methods 7, 43-46
-
(2010)
Nat. Methods
, vol.7
, pp. 43-46
-
-
Picotti, P.1
Rinner, O.2
Stallmach, R.3
Dautel, F.4
Farrah, T.5
Domon, B.6
Wenschuh, H.7
Aebersold, R.8
-
11
-
-
23944526367
-
PRIDE: The proteomics identifications database
-
DOI 10.1002/pmic.200401303
-
Martens, L., Hermjakob, H., Jones, P., Adamski, M., Taylor, C., States, D., Gevaert, K., Vandekerckhove, J., and Apweiler, R. (2005) PRIDE: The proteomics identifications database. Proteomics 5, 3537-3545 (Pubitemid 41192059)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3537-3545
-
-
Martens, L.1
Hermjakob, H.2
Jones, P.3
Adamsk, M.4
Taylor, C.5
States, D.6
Gevaert, K.7
Vandekerckhove, J.8
Apweiler, R.9
-
12
-
-
33644876912
-
The PeptideAtlas project
-
Desiere, F., Deutsch, E. W., King, N. L., Nesvizhskii, A. I., Mallick, P., Eng, J., Chen, S., Eddes, J., Loevenich, S. N., and Aebersold, R. (2006) The PeptideAtlas project. Nucleic Acids Res. 34, D655-D658
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Desiere, F.1
Deutsch, E.W.2
King, N.L.3
Nesvizhskii, A.I.4
Mallick, P.5
Eng, J.6
Chen, S.7
Eddes, J.8
Loevenich, S.N.9
Aebersold, R.10
-
13
-
-
33846133955
-
Computational prediction of proteotypic peptides for quantitative proteomics
-
DOI 10.1038/nbt1275, PII NBT1275
-
Mallick, P., Schirle, M., Chen, S. S., Flory, M. R., Lee, H., Martin, D., Ranish, J., Raught, B., Schmitt, R., Werner, T., Kuster, B., and Aebersold, R. (2007) Computational prediction of proteotypic peptides for quantitative proteomics. Nat. Biotechnol. 25, 125-131 (Pubitemid 46098780)
-
(2007)
Nature Biotechnology
, vol.25
, Issue.1
, pp. 125-131
-
-
Mallick, P.1
Schirle, M.2
Chen, S.S.3
Flory, M.R.4
Lee, H.5
Martin, D.6
Ranish, J.7
Raught, B.8
Schmitt, R.9
Werner, T.10
Kuster, B.11
Aebersold, R.12
-
14
-
-
54049090766
-
Selected reaction monitoring for quantitative proteomics: A tutorial
-
10.1038/msb.2008.61
-
Lange, V., Picotti, P., Domon, B., and Aebersold, R. (2008) Selected reaction monitoring for quantitative proteomics: A tutorial. Mol. Syst. Biol. 4, 222 10.1038/msb.2008.61
-
(2008)
Mol. Syst. Biol.
, vol.4
, pp. 222
-
-
Lange, V.1
Picotti, P.2
Domon, B.3
Aebersold, R.4
-
15
-
-
33847630405
-
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
-
DOI 10.1038/nmeth1019, PII NMETH1019
-
Elias, J. E., and Gygi, S. P. (2007) Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods 4, 207-214 (Pubitemid 46358868)
-
(2007)
Nature Methods
, vol.4
, Issue.3
, pp. 207-214
-
-
Elias, J.E.1
Gygi, S.P.2
-
16
-
-
68749094119
-
Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics
-
Picotti, P., Bodenmiller, B., Mueller, L. N., Domon, B., and Aebersold, R. (2009) Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics. Cell 138, 795-806
-
(2009)
Cell
, vol.138
, pp. 795-806
-
-
Picotti, P.1
Bodenmiller, B.2
Mueller, L.N.3
Domon, B.4
Aebersold, R.5
-
17
-
-
17744401429
-
Centralization: A new method for the normalization of gene expression data
-
Zien, A., Aigner, T., Zimmer, R., and Lengauer, T. (2001) Centralization: A new method for the normalization of gene expression data. Bioinformatics 17, (Suppl. 1), S323-S331 (Pubitemid 33793525)
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL. 1
-
-
Zien, A.1
Aigner, T.2
Zimmer, R.3
Lengauer, T.4
-
18
-
-
84859880168
-
Protein significance analysis in selected reaction monitoring (SRM) measurements
-
10.1074/mcp.M111.014662
-
Chang, C. Y., Picotti, P., Huettenhain, R., Heinzelmann-Schwarz, V., Jovanovic, M., Aebersold, R., and Vitek, O. (2011) Protein significance analysis in selected reaction monitoring (SRM) measurements. Mol. Cell Proteomics 10.1074/mcp.M111.014662
-
(2011)
Mol. Cell Proteomics
-
-
Chang, C.Y.1
Picotti, P.2
Huettenhain, R.3
Heinzelmann-Schwarz, V.4
Jovanovic, M.5
Aebersold, R.6
Vitek, O.7
-
19
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., and Hochberg, Y. (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. Series B 57, 289-300
-
(1995)
J. R. Stat. Soc. Series B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
20
-
-
0028107128
-
Lipopolysaccharide induces prostaglandin H synthase-2 protein and mRNA in human alveolar macrophages and blood monocytes
-
Hempel, S. L., Monick, M. M., and Hunninghake, G. W. (1994) Lipopolysaccharide induces prostaglandin H synthase-2 protein and mRNA in human alveolar macrophages and blood monocytes. J. Clin. Invest. 93, 391-396 (Pubitemid 24030860)
-
(1994)
Journal of Clinical Investigation
, vol.93
, Issue.1
, pp. 391-396
-
-
Hempel, S.L.1
Monick, M.M.2
Hunninghake, G.W.3
-
21
-
-
0027076645
-
Selective expression of mitogen-inducible cyclooxygenase in macrophages stimulated with lipopolysaccharide
-
Lee, S. H., Soyoola, E., Chanmugam, P., Hart, S., Sun, W., Zhong, H., Liou, S., Simmons, D., and Hwang, D. (1992) Selective expression of mitogen-inducible cyclooxygenase in macrophages stimulated with lipopolysaccharide. J. Biol. Chem. 267, 25934-25938 (Pubitemid 23013998)
-
(1992)
Journal of Biological Chemistry
, vol.267
, Issue.36
, pp. 25934-25938
-
-
Lee, S.H.1
Soyoola, E.2
Chanmugam, P.3
Hart, S.4
Sun, W.5
Zhong, H.6
Liou, S.7
Simmons, D.8
Hwang, D.9
-
22
-
-
80054082654
-
Phospholipase A2 enzymes: Physical structure, biological function, disease implication, chemical inhibition, and therapeutic intervention
-
Dennis, E. A., Cao, J., Hsu, Y. H., Magrioti, V., and Kokotos, G. (2011) Phospholipase A2 enzymes: Physical structure, biological function, disease implication, chemical inhibition, and therapeutic intervention. Chem. Rev. 111, 6130-6185
-
(2011)
Chem. Rev.
, vol.111
, pp. 6130-6185
-
-
Dennis, E.A.1
Cao, J.2
Hsu, Y.H.3
Magrioti, V.4
Kokotos, G.5
-
23
-
-
34347397335
-
5-Lipoxygenase: regulation of expression and enzyme activity
-
DOI 10.1016/j.tibs.2007.06.002, PII S0968000407001442
-
Rådmark, O., Werz, O., Steinhilber, D., and Samuelsson, B. (2007) 5-Lipoxygenase: Regulation of expression and enzyme activity. Trends Biochem. Sci. 32, 332-341 (Pubitemid 47021417)
-
(2007)
Trends in Biochemical Sciences
, vol.32
, Issue.7
, pp. 332-341
-
-
Radmark, O.1
Werz, O.2
Steinhilber, D.3
Samuelsson, B.4
-
24
-
-
0142151057
-
5-Lipoxygenase: Cellular biology and molecular pharmacology
-
Werz, O. (2002) 5-Lipoxygenase: Cellular biology and molecular pharmacology. Curr. Drug Targets Inflamm. Allergy 1, 23-44
-
(2002)
Curr. Drug Targets Inflamm. Allergy
, vol.1
, pp. 23-44
-
-
Werz, O.1
-
26
-
-
0027598135
-
Lipopolysaccharide primes human alveolar macrophages for enhanced release of superoxide anion and leukotriene B4: Self-limitations of the priming response with protein synthesis
-
Suzuki, K., Yamamoto, T., Sato, A., Murayama, T., Amitani, R., Yamamoto, K., and Kuze, F. (1993) Lipopolysaccharide primes human alveolar macrophages for enhanced release of superoxide anion and leukotriene B4: Self-limitations of the priming response with protein synthesis. Am. J. Respir. Cell Mol. Biol. 8, 500-508
-
(1993)
Am. J. Respir. Cell Mol. Biol.
, vol.8
, pp. 500-508
-
-
Suzuki, K.1
Yamamoto, T.2
Sato, A.3
Murayama, T.4
Amitani, R.5
Yamamoto, K.6
Kuze, F.7
-
27
-
-
0022469232
-
Bacterial lipopolysaccharides prime macrophages for enhanced release of arachidonic acid metabolites
-
Aderem, A. A., Cohen, D. S., Wright, S. D., and Cohn, Z. A. (1986) Bacterial lipopolysaccharides prime macrophages for enhanced release of arachidonic acid metabolites. J. Exp. Med. 164, 165-179 (Pubitemid 16069230)
-
(1986)
Journal of Experimental Medicine
, vol.164
, Issue.1
, pp. 165-179
-
-
Aderem, A.A.1
Cohen, D.S.2
Wright, S.D.3
Cohn, Z.A.4
-
28
-
-
77954886436
-
P2X4 receptors mediate PGE2 release by tissue-resident macrophages and initiate inflammatory pain
-
Ulmann, L., Hirbec, H., and Rassendren, F. (2010) P2X4 receptors mediate PGE2 release by tissue-resident macrophages and initiate inflammatory pain. EMBO J. 29, 2290-2300
-
(2010)
EMBO J.
, vol.29
, pp. 2290-2300
-
-
Ulmann, L.1
Hirbec, H.2
Rassendren, F.3
-
29
-
-
80052378448
-
Specificity of eicosanoid production depends on the TLR-4-stimulated macrophage phenotype
-
Norris, P. C., Reichart, D., Dumlao, D. S., Glass, C. K., and Dennis, E. A. (2011) Specificity of eicosanoid production depends on the TLR-4-stimulated macrophage phenotype. J. Leukoc. Biol. 90, 563-574
-
(2011)
J. Leukoc. Biol.
, vol.90
, pp. 563-574
-
-
Norris, P.C.1
Reichart, D.2
Dumlao, D.S.3
Glass, C.K.4
Dennis, E.A.5
-
30
-
-
60549109072
-
Lipidomics joins the omics evolution
-
Dennis, E. A. (2009) Lipidomics joins the omics evolution. Proc. Natl. Acad. Sci. U.S.A. 106, 2089-2090
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 2089-2090
-
-
Dennis, E.A.1
|