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Volumn 29, Issue 7, 2012, Pages 1797-1806

An ancestral miR-1304 allele present in neanderthals regulates genes involved in enamel formation and could explain dental differences with modern humans

Author keywords

gene regulation; microRNA; miR 1304; miR SNP; Neanderthal; tooth development

Indexed keywords

MICRORNA; MICRORNA 1304; UNCLASSIFIED DRUG;

EID: 84863571375     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/mss023     Document Type: Article
Times cited : (27)

References (64)
  • 3
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs:genomics, biogenesis, mechanism, and function
    • Bartel DP. 2004. MicroRNAs:genomics, biogenesis, mechanism, and function. Cell 116:281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 5
    • 11844262661 scopus 로고    scopus 로고
    • Phylogenetic shadowing and computational identification of human microRNA genes
    • DOI 10.1016/j.cell.2004.12.031, PII S0092867404012565
    • Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk R, Cuppen E. 2005. Phylogenetic shadowing and computational identification of human microRNA genes. Cell 120:21-24. (Pubitemid 40094599)
    • (2005) Cell , vol.120 , Issue.1 , pp. 21-24
    • Berezikov, E.1    Guryev, V.2    Van De Belt, J.3    Wienholds, E.4    Plasterk, R.H.A.5    Cuppen, E.6
  • 6
    • 56949098027 scopus 로고    scopus 로고
    • Functional genetic variation of human miRNAs and phenotypic consequences
    • Borel C, Antonarakis SE. 2008. Functional genetic variation of human miRNAs and phenotypic consequences. Mamm Genome. 19:503-509.
    • (2008) Mamm Genome , vol.19 , pp. 503-509
    • Borel, C.1    Antonarakis, S.E.2
  • 7
    • 77950574586 scopus 로고    scopus 로고
    • Genome-wide comparative analysis of micro-RNAs in three non-human primates
    • Brameier M. 2010. Genome-wide comparative analysis of micro-RNAs in three non-human primates. BMC Res Notes. 3:64.
    • (2010) BMC Res Notes , vol.3 , pp. 64
    • Brameier, M.1
  • 9
    • 67650831473 scopus 로고    scopus 로고
    • Targeted retrieval and analysis of five Neandertal mtDNA genomes
    • Briggs AW, Good JM, Green RE, et al. (18 co-authors). 2009. Targeted retrieval and analysis of five Neandertal mtDNA genomes. Science 325:318-321.
    • (2009) Science , vol.325 , pp. 318-321
    • Briggs, A.W.1    Good, J.M.2    Green, R.E.3
  • 11
    • 77952206860 scopus 로고    scopus 로고
    • Targeted investigation of the Neandertal genome by array-based sequence capture
    • Burbano HA, Hodges E, Green RE, et al. (20 co-authors). 2010. Targeted investigation of the Neandertal genome by array-based sequence capture. Science 328:723-725.
    • (2010) Science , vol.328 , pp. 723-725
    • Burbano, H.A.1    Hodges, E.2    Green, R.E.3
  • 12
    • 77955504515 scopus 로고    scopus 로고
    • MicroRNAs play a critical role in tooth development
    • Cao H, Wang J, Li X, et al. (11 co-authors). 2010. MicroRNAs play a critical role in tooth development. J Dent Res. 89:779-784.
    • (2010) J Dent Res , vol.89 , pp. 779-784
    • Cao, H.1    Wang, J.2    Li, X.3
  • 13
    • 46149104377 scopus 로고    scopus 로고
    • Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution
    • DOI 10.1016/j.cell.2008.06.030, PII S0092867408008179
    • Carroll SB. 2008. Evo-devo and an expanding evolutionary synthesis: A genetic theory of morphological evolution. Cell 134(1):25-36. (Pubitemid 351905747)
    • (2008) Cell , vol.134 , Issue.1 , pp. 25-36
    • Carroll, S.B.1
  • 14
    • 34250682267 scopus 로고    scopus 로고
    • Deep conservation of microRNA-target relationships and 3#UTR motifs in vertebrates, flies, and nematodes
    • Chen K, Rajewsky N. 2006. Deep conservation of microRNA-target relationships and 3#UTR motifs in vertebrates, flies, and nematodes. Cold Spring Harb Symp Quant Biol. 71:149-156.
    • (2006) Cold Spring Harb Symp Quant Biol , vol.71 , pp. 149-156
    • Chen, K.1    Rajewsky, N.2
  • 15
    • 0034303215 scopus 로고    scopus 로고
    • Enamelin maps to human chromosome 4q21 within the autosomal dominant amelogenesis imperfecta locus
    • Dong J, Gu TT, Simmons D, MacDougall M. 2000. Enamelin maps to human chromosome 4q21 within the autosomal dominant amelogenesis imperfecta locus. Eur J Oral Sci. 108:353-358.
    • (2000) Eur J Oral Sci , vol.108 , pp. 353-358
    • Dong, J.1    Gu, T.T.2    Simmons, D.3    MacDougall, M.4
  • 16
    • 77954217594 scopus 로고    scopus 로고
    • Using genetic evidence to evaluate four palaeoanthropological hypotheses for the timing of Neanderthal and modern human origins
    • Endicott P, Ho SY, Stringer C. 2010. Using genetic evidence to evaluate four palaeoanthropological hypotheses for the timing of Neanderthal and modern human origins. J Hum Evol. 59:87-95.
    • (2010) J Hum Evol , vol.59 , pp. 87-95
    • Endicott, P.1    Ho, S.Y.2    Stringer, C.3
  • 18
    • 38349169664 scopus 로고    scopus 로고
    • Mechanisms of post-transcriptional regulation by microRNAs: Are the answers in sight?
    • Filipowicz W, Bhattacharyya SN, Sonenberg N. 2008. Mechanisms of post-transcriptional regulation by microRNAs: Are the answers in sight?. Nat Rev Genet. 9:102-114.
    • (2008) Nat Rev Genet , vol.9 , pp. 102-114
    • Filipowicz, W.1    Bhattacharyya, S.N.2    Sonenberg, N.3
  • 20
  • 22
    • 77952136530 scopus 로고    scopus 로고
    • A draft sequence of the Neandertal genome
    • Green RE, Krause J, Briggs AW, et al. (56 co-authors). 2010. A draft sequence of the Neandertal genome. Science 328:710-722.
    • (2010) Science , vol.328 , pp. 710-722
    • Green, R.E.1    Krause, J.2    Briggs, A.W.3
  • 23
    • 78651109601 scopus 로고    scopus 로고
    • Overexpression of miR-128 specifically inhibits the truncated isoform of NTRK 3 and upregulates BCL 2 in SH-SY 5 y neuroblastoma cells
    • Guidi M, Muiños-Gimeno M, Kagerbauer B, Mart́ E, Estivill X, Espinosa-Parrilla Y. 2010. Overexpression of miR-128 specifically inhibits the truncated isoform of NTRK 3 and upregulates BCL 2 in SH-SY 5 Y neuroblastoma cells. BMC Mol Biol. 11:95.
    • (2010) BMC Mol Biol , vol.11 , pp. 95
    • Guidi, M.1    Muiños-Gimeno, M.2    Kagerbauer, B.3    Mart́, E.4    Estivill, X.5    Espinosa-Parrilla, Y.6
  • 25
    • 0035581087 scopus 로고    scopus 로고
    • DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA
    • Hofreiter M, Jaenicke V, Serre D, Haeseler Av A, Pääbo S. 2001. DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA. Nucleic Acids Res. 29:4793-4799. (Pubitemid 33133550)
    • (2001) Nucleic Acids Research , vol.29 , Issue.23 , pp. 4793-4799
    • Hofreiter, M.1    Jaenicke, V.2    Serre, D.3    Von Haeseler, A.4    Paabo, S.5
  • 26
    • 70349482681 scopus 로고    scopus 로고
    • The origin of Neandertals
    • Hublin JJ. 2009. The origin of Neandertals. Proc Natl Acad Sci U S A. 106:16022-16027.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 16022-16027
    • Hublin, J.J.1
  • 29
    • 0031568256 scopus 로고    scopus 로고
    • Mapping of the locus for autosomal dominant amelogenesis imperfecta (AIH2) to a 4-Mb YAC contig on chromosome 4q11-q21
    • DOI 10.1006/geno.1996.4485
    • Kärrman C, Bäckman B, Dixon M, Holmgren G, Forsman K. 1997. Mapping of the locus for autosomal dominant amelogenesis imperfecta (AIH2) to a 4-Mb YAC contig on chromosome 4q11-q21. Genomics 39:164-170. (Pubitemid 27069214)
    • (1997) Genomics , vol.39 , Issue.2 , pp. 164-170
    • Karrman, C.1    Backman, B.2    Dixon, M.3    Holmgren, G.4    Forsman, K.5
  • 31
    • 77955902024 scopus 로고    scopus 로고
    • The widespread regulation of microRNA biogenesis, function and decay
    • Krol J, Loedige I, Filipowicz W. 2010. The widespread regulation of microRNA biogenesis, function and decay. Nat Rev Genet. 11:597-610.
    • (2010) Nat Rev Genet , vol.11 , pp. 597-610
    • Krol, J.1    Loedige, I.2    Filipowicz, W.3
  • 32
    • 70349783965 scopus 로고    scopus 로고
    • Bitter taste perception in Neanderthals through the analysis of the TAS2R38 gene
    • Lalueza-Fox C, Gigli E, de la Rasilla M, Fortea J, Rosas A. 2009. Bitter taste perception in Neanderthals through the analysis of the TAS2R38 gene. Biol. Lett. 5:809-811.
    • (2009) Biol. Lett , vol.5 , pp. 809-811
    • Lalueza-Fox, C.1    Gigli, E.2    De La Rasilla, M.3    Fortea, J.4    Rosas, A.5
  • 35
    • 78651103359 scopus 로고    scopus 로고
    • Genetic evidence for patrilocal mating behavior among Neandertal groups
    • Lalueza-Fox C, Rosas A, Estalrrich A, et al. (16 co-authors). 2011. Genetic evidence for patrilocal mating behavior among Neandertal groups. Proc Natl Acad Sci U S A. 108:250-253.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 250-253
    • Lalueza-Fox, C.1    Rosas, A.2    Estalrrich, A.3
  • 36
    • 78651251105 scopus 로고    scopus 로고
    • Novel schizophrenia risk gene TCF4 influences verbal learning and memory functioning in schizophrenia patients
    • Lennertz L, Rujescu D, Wagner M, et al. (14 co-authors). 2011. Novel schizophrenia risk gene TCF4 influences verbal learning and memory functioning in schizophrenia patients. Neuropsychobiology 63:131-136.
    • (2011) Neuropsychobiology , vol.63 , pp. 131-136
    • Lennertz, L.1    Rujescu, D.2    Wagner, M.3
  • 37
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • DOI 10.1016/j.cell.2004.12.035, PII S0092867404012607
    • Lewis BP, Burge CB, Bartel DP. 2005. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 120:15-20. (Pubitemid 40094598)
    • (2005) Cell , vol.120 , Issue.1 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 42
    • 79952386187 scopus 로고    scopus 로고
    • Human-specific loss of regulatory DNA and the evolution of human-specific traits
    • McLean CY, Reno PL, Pollen AA, et al. (13 co-authors). 2011. Human-specific loss of regulatory DNA and the evolution of human-specific traits. Nature 471:216-219.
    • (2011) Nature , vol.471 , pp. 216-219
    • McLean, C.Y.1    Reno, P.L.2    Pollen, A.A.3
  • 43
    • 9644277031 scopus 로고    scopus 로고
    • Neanderthals and the modern human colonization of Europe
    • DOI 10.1038/nature03103
    • Mellars P. 2004. Neanderthals and the modern human colonization of Europe. Nature 432:461-465. (Pubitemid 39576521)
    • (2004) Nature , vol.432 , Issue.7016 , pp. 461-465
    • Mellars, P.1
  • 44
    • 77951206889 scopus 로고    scopus 로고
    • Tooth morphogenesis and ameloblast differentiation are regulated by micro-RNAs
    • Michon F, Tummers M, Kyyrönen M, Frilander MJ, Thesleff I. 2010. Tooth morphogenesis and ameloblast differentiation are regulated by micro-RNAs. Dev Biol. 340:355-368.
    • (2010) Dev Biol. , vol.340 , pp. 355-368
    • Michon, F.1    Tummers, M.2    Kyyrönen, M.3    Frilander, M.J.4    Thesleff, I.5
  • 46
    • 79952017623 scopus 로고    scopus 로고
    • Human microRNAs miR-22, miR-138-2, miR-148a, and miR-488 are associated with panic disorder and regulate several anxiety candidate genes and related pathways
    • Muiños-Gimeno M, Espinosa-Parrilla Y, Guidi M, et al. (14 coauthors). 2011. Human microRNAs miR-22, miR-138-2, miR-148a, and miR-488 are associated with panic disorder and regulate several anxiety candidate genes and related pathways. Biol Psychiatry. 69:526-533.
    • (2011) Biol Psychiatry , vol.69 , pp. 526-533
    • Muiños-Gimeno, M.1    Espinosa-Parrilla, Y.2    Guidi, M.3
  • 48
    • 35548996307 scopus 로고    scopus 로고
    • Determinants of targeting by endogenous and exogenous microRNAs and siRNAs
    • DOI 10.1261/rna.768207
    • Nielsen CB, Shomron N, Sandberg R, Hornstein E, Kitzman J, Burge CB. 2007. Determinants of targeting by endogenous and exogenous microRNAs and siRNAs. RNA 13:1894-1910. (Pubitemid 350005216)
    • (2007) RNA , vol.13 , Issue.11 , pp. 1894-1910
    • Nielsen, C.B.1    Shomron, N.2    Sandberg, R.3    Hornstein, E.4    Kitzman, J.5    Burge, C.B.6
  • 49
    • 44649105083 scopus 로고    scopus 로고
    • Dental tissue proportions and enamel thickness in Neandertal and modern human molars
    • Olejniczak AJ, Smith TM, Feeney RN, et al. (14 co-authors). 2008. Dental tissue proportions and enamel thickness in Neandertal and modern human molars. J Hum Evol. 55:12-23.
    • (2008) J Hum Evol , vol.55 , pp. 12-23
    • Olejniczak, A.J.1    Smith, T.M.2    Feeney, R.N.3
  • 50
    • 66049157487 scopus 로고    scopus 로고
    • Signals of recent positive selection in a worldwide sample of human populations
    • Pickrell JK, Coop G, Novembre J, et al. (8 co-authors). 2009. Signals of recent positive selection in a worldwide sample of human populations. Genome Res. 19(5):826-837.
    • (2009) Genome Res , vol.19 , Issue.5 , pp. 826-837
    • Pickrell, J.K.1    Coop, G.2    Novembre, J.3
  • 51
    • 61849140663 scopus 로고    scopus 로고
    • Signatures of purifying and local positive selection in human miRNAs
    • Quach H, Barreiro LB, Laval G, et al. (11 co-authors). 2009. Signatures of purifying and local positive selection in human miRNAs. Am J Hum Genet. 84:316-327.
    • (2009) Am J Hum Genet , vol.84 , pp. 316-327
    • Quach, H.1    Barreiro, L.B.2    Laval, G.3
  • 54
    • 0027700741 scopus 로고
    • Clinical diagnosis and management strategies of amelogenesis imperfecta variants
    • Seow WK. 1993. Clinical diagnosis and management strategies of amelogenesis imperfecta variants. Pediatr Dent. 15:384-393.
    • (1993) Pediatr Dent , vol.15 , pp. 384-393
    • Seow, W.K.1
  • 57
    • 78650441638 scopus 로고    scopus 로고
    • Dental evidence for ontogenetic differences between modern humans and Neanderthals
    • Smith TM, Tafforeau P, Reid DJ, et al. (14 co-authors). 2010. Dental evidence for ontogenetic differences between modern humans and Neanderthals. Proc Natl Acad Sci U S A. 107:20923-20928.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 20923-20928
    • Smith, T.M.1    Tafforeau, P.2    Reid, D.J.3
  • 59
    • 68449090594 scopus 로고    scopus 로고
    • Common variants conferring risk of schizophrenia
    • Stefansson H, Ophoff RA, Steinberg S, et al. (87 co-authors). 2009. Common variants conferring risk of schizophrenia. Nature 460:744-747.
    • (2009) Nature , vol.460 , pp. 744-747
    • Stefansson, H.1    Ophoff, R.A.2    Steinberg, S.3
  • 60
    • 0033253487 scopus 로고    scopus 로고
    • New age estimates for the Swanscombe hominid, and their significance for human
    • Stringer CB, Hublin JJ. 1999. New age estimates for the Swanscombe hominid, and their significance for human. J HumEvol. 37:873-877.
    • (1999) J HumEvol , vol.37 , pp. 873-877
    • Stringer, C.B.1    Hublin, J.J.2
  • 63


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