메뉴 건너뛰기




Volumn 30, Issue 2, 2012, Pages 374-382

Differentially expressed microRNAs in Huh-7 cells expressing HCV core genotypes 3a or 1b: Potential functions and downstream pathways

Author keywords

Gene ontology; Hepatitis C virus; Microarray; MicroRNA

Indexed keywords

MICRORNA;

EID: 84863539854     PISSN: 11073756     EISSN: 1791244X     Source Type: Journal    
DOI: 10.3892/ijmm.2012.991     Document Type: Article
Times cited : (9)

References (46)
  • 1
    • 79953105820 scopus 로고    scopus 로고
    • Sequence variability of HCV core region: Important predictors of HCV induced pathogenesis and viral production
    • Khaliq S, Jahan S and Pervaiz A: Sequence variability of HCV core region: important predictors of HCV induced pathogenesis and viral production. Infect Genet Evol 11: 543-556, 2011.
    • (2011) Infect Genet Evol , vol.11 , pp. 543-556
    • Khaliq, S.1    Jahan, S.2    Pervaiz, A.3
  • 2
    • 79952111965 scopus 로고    scopus 로고
    • Insulin resistance, hepatic steatosis and hepatitis C: A complex relationship with relevant clinical implications
    • Arrese M, Riquelme A and Soza A: Insulin resistance, hepatic steatosis and hepatitis C: a complex relationship with relevant clinical implications. Ann Hepatol (Suppl 9): S112-S118, 2010.
    • (2010) Ann Hepatol , Issue.SUPPL. 9
    • Arrese, M.1    Riquelme, A.2    Soza, A.3
  • 3
    • 80052723449 scopus 로고    scopus 로고
    • Impact of HCV genetic differences on pathobiology of disease
    • Ripoli M and Pazienza V: Impact of HCV genetic differences on pathobiology of disease. Expert Rev Anti Infect Ther 9: 747-759, 2011.
    • (2011) Expert Rev Anti Infect Ther , vol.9 , pp. 747-759
    • Ripoli, M.1    Pazienza, V.2
  • 4
    • 64749092296 scopus 로고    scopus 로고
    • Gene expression profile of Huh-7 cells expressing hepatitis C virus genotype 1b or 3a core proteins
    • Pazienza V, Clement S, Pugnale P, et al: Gene expression profile of Huh-7 cells expressing hepatitis C virus genotype 1b or 3a core proteins. Liver Int 29: 661-669, 2009.
    • (2009) Liver Int , vol.29 , pp. 661-669
    • Pazienza, V.1    Clement, S.2    Pugnale, P.3
  • 5
    • 38148999355 scopus 로고    scopus 로고
    • Let me count the ways: Mechanisms of gene regulation by miRNAs and siRNAs
    • Wu L and Belasco JG: Let me count the ways: mechanisms of gene regulation by miRNAs and siRNAs. Mol Cell 29: 1-7, 2008.
    • (2008) Mol Cell , vol.29 , pp. 1-7
    • Wu, L.1    Belasco, J.G.2
  • 6
    • 69549124090 scopus 로고    scopus 로고
    • Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers
    • Peng X, Li Y, Walters KA, et al: Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers. BMC Genomics 10: 373, 2009.
    • (2009) BMC Genomics , vol.10 , pp. 373
    • Peng, X.1    Li, Y.2    Walters, K.A.3
  • 7
    • 79951624703 scopus 로고    scopus 로고
    • Parallel microRNA and mRNA expression profiling of (genotype 1b) human hepatoma cells expressing hepatitis C virus
    • Steuerwald NM, Parsons JC, Bennett K, Bates TC and Bonkovsky HL: Parallel microRNA and mRNA expression profiling of (genotype 1b) human hepatoma cells expressing hepatitis C virus. Liver Int 30: 1490-1504, 2010.
    • (2010) Liver Int , vol.30 , pp. 1490-1504
    • Steuerwald, N.M.1    Parsons, J.C.2    Bennett, K.3    Bates, T.C.4    Bonkovsky, H.L.5
  • 8
    • 24644483623 scopus 로고    scopus 로고
    • Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA
    • Jopling CL, Yi M, Lancaster AM, Lemon SM and Sarnow P: Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA. Science 309: 1577-1581, 2005.
    • (2005) Science , vol.309 , pp. 1577-1581
    • Jopling, C.L.1    Yi, M.2    Lancaster, A.M.3    Lemon, S.M.4    Sarnow, P.5
  • 9
    • 17044382863 scopus 로고    scopus 로고
    • An in vitro model of hepatitis C virus genotype 3a-associated triglycerides accumulation
    • Abid K, Pazienza V, de Gottardi A, et al: An in vitro model of hepatitis C virus genotype 3a-associated triglycerides accumulation. J Hepatol 42: 744-751, 2005.
    • (2005) J Hepatol , vol.42 , pp. 744-751
    • Abid, K.1    Pazienza, V.2    De Gottardi, A.3
  • 10
    • 84862908613 scopus 로고    scopus 로고
    • Transition from hepatic steatosis to steatohepatitis: Unique microRNA patterns and potential downstream functions and pathways
    • Jin X, Chen YP, Kong M, Zheng L, Yang YD and Li YM: Transition from hepatic steatosis to steatohepatitis: unique microRNA patterns and potential downstream functions and pathways. J Gastroenterol Hepatol 27: 331-340, 2011.
    • (2011) J Gastroenterol Hepatol , vol.27 , pp. 331-340
    • Jin, X.1    Chen, Y.P.2    Kong, M.3    Zheng, L.4    Yang, Y.D.5    Li, Y.M.6
  • 11
    • 34547589578 scopus 로고    scopus 로고
    • DAVID Bioinformatics Resources: Expanded annotation database and novel algorithms to better extract biology from large gene lists
    • Huang da W, Sherman BT, Tan Q, et al: DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists. Nucleic Acids Res 35: W169-W175, 2007.
    • (2007) Nucleic Acids Res , vol.35
    • Huang Da, W.1    Sherman, B.T.2    Tan, Q.3
  • 12
    • 70449158340 scopus 로고
    • A simple method for the isolation and purification of total lipides from animal tissues
    • Folch J, Lees M and Sloane Stanley GH: A simple method for the isolation and purification of total lipides from animal tissues. J Biol Chem 226: 497-509, 1957.
    • (1957) J Biol Chem , vol.226 , pp. 497-509
    • Folch, J.1    Lees, M.2    Sloane Stanley, G.H.3
  • 13
    • 0030928695 scopus 로고    scopus 로고
    • Hepatitis C: The clinical spectrum of disease
    • Hoofnagle JH: Hepatitis C: the clinical spectrum of disease. Hepatology 26 (Suppl 1): S15-S20, 1997.
    • (1997) Hepatology , vol.26 , Issue.SUPPL. 1
    • Hoofnagle, J.H.1
  • 15
    • 84858195484 scopus 로고    scopus 로고
    • Liver-specific microRNA-122: Biogenesis and function
    • Jopling C: Liver-specific microRNA-122: Biogenesis and function. RNA Biol 9: 137-142, 2012.
    • (2012) RNA Biol , vol.9 , pp. 137-142
    • Jopling, C.1
  • 16
    • 35349009932 scopus 로고    scopus 로고
    • Interferon modulation of cellular microRNAs as an antiviral mechanism
    • Pedersen IM, Cheng G, Wieland S, et al: Interferon modulation of cellular microRNAs as an antiviral mechanism. Nature 449: 919-922, 2007.
    • (2007) Nature , vol.449 , pp. 919-922
    • Pedersen, I.M.1    Cheng, G.2    Wieland, S.3
  • 17
    • 0033756124 scopus 로고    scopus 로고
    • A multicenter, randomized trial of daily high-dose interferon-alfa 2b for the treatment of chronic hepatitis c: Pretreatment stratification by viral burden and genotype
    • Fried MW, Shiffman M, Sterling RK, et al: A multicenter, randomized trial of daily high-dose interferon-alfa 2b for the treatment of chronic hepatitis c: pretreatment stratification by viral burden and genotype. Am J Gastroenterol 95: 3225-3229, 2000.
    • (2000) Am J Gastroenterol , vol.95 , pp. 3225-3229
    • Fried, M.W.1    Shiffman, M.2    Sterling, R.K.3
  • 18
    • 84555191563 scopus 로고    scopus 로고
    • Mechanisms of non-response to antiviral treatment in chronic hepatitis C
    • Chevaliez S and Asselah T: Mechanisms of non-response to antiviral treatment in chronic hepatitis C. Clin Res Hepatol Gastroenterol 35 (Suppl 1): S31-S41, 2011.
    • (2011) Clin Res Hepatol Gastroenterol , vol.35 , Issue.SUPPL. 1
    • Chevaliez, S.1    Asselah, T.2
  • 19
    • 33644806684 scopus 로고    scopus 로고
    • Insulin resistance is associated with steatosis in nondiabetic patients with genotype 1 chronic hepatitis C
    • Camma C, Bruno S, Di Marco V, et al: Insulin resistance is associated with steatosis in nondiabetic patients with genotype 1 chronic hepatitis C. Hepatology 43: 64-71, 2006.
    • (2006) Hepatology , vol.43 , pp. 64-71
    • Camma, C.1    Bruno, S.2    Di Marco, V.3
  • 20
    • 36348950196 scopus 로고    scopus 로고
    • Hepatitis C virus genotype 1b as a major risk factor associated with hepatocellular carcinoma in patients with cirrhosis: A seventeen-year prospective cohort study
    • Bruno S, Crosignani A, Maisonneuve P, Rossi S, Silini E and Mondelli MU: Hepatitis C virus genotype 1b as a major risk factor associated with hepatocellular carcinoma in patients with cirrhosis: a seventeen-year prospective cohort study. Hepatology 46: 1350-1356, 2007.
    • (2007) Hepatology , vol.46 , pp. 1350-1356
    • Bruno, S.1    Crosignani, A.2    Maisonneuve, P.3    Rossi, S.4    Silini, E.5    Mondelli, M.U.6
  • 21
    • 80755144043 scopus 로고    scopus 로고
    • MicroRNA-423 promotes cell growth and regulates G(1)/S transition by targeting p21Cip1/Waf1 in hepatocellular carcinoma
    • Lin J, Huang S, Wu S, et al: MicroRNA-423 promotes cell growth and regulates G(1)/S transition by targeting p21Cip1/Waf1 in hepatocellular carcinoma. Carcinogenesis 32: 1641-1647, 2011.
    • (2011) Carcinogenesis , vol.32 , pp. 1641-1647
    • Lin, J.1    Huang, S.2    Wu, S.3
  • 22
    • 68049119923 scopus 로고    scopus 로고
    • MicroRNA 92b controls the G1/S checkpoint gene p57 in human embryonic stem cells
    • Sengupta S, Nie J, Wagner RJ, Yang C, Stewart R and Thomson JA: MicroRNA 92b controls the G1/S checkpoint gene p57 in human embryonic stem cells. Stem Cells 27: 1524-1528, 2009.
    • (2009) Stem Cells , vol.27 , pp. 1524-1528
    • Sengupta, S.1    Nie, J.2    Wagner, R.J.3    Yang, C.4    Stewart, R.5    Thomson, J.A.6
  • 23
    • 84867397321 scopus 로고    scopus 로고
    • miR-663, a microRNA targeting p21(WAF1/CIP1), promotes the proliferation and tumorigenesis of nasopharyngeal carcinoma
    • Jan 16, (Epub ahead of print)
    • Yi C, Wang Q, Wang L, et al: miR-663, a microRNA targeting p21(WAF1/CIP1), promotes the proliferation and tumorigenesis of nasopharyngeal carcinoma. Oncogene: Jan 16, 2012 (Epub ahead of print).
    • (2012) Oncogene
    • Yi, C.1    Wang, Q.2    Wang, L.3
  • 24
    • 77956906202 scopus 로고    scopus 로고
    • Induction of growth arrest by miR-542-3p that targets survivin
    • Yoon S, Choi YC, Lee S, Jeong Y, Yoon J and Baek K: Induction of growth arrest by miR-542-3p that targets survivin. FEBS Lett 584: 4048-4052, 2010.
    • (2010) FEBS Lett , vol.584 , pp. 4048-4052
    • Yoon, S.1    Choi, Y.C.2    Lee, S.3    Jeong, Y.4    Yoon, J.5    Baek, K.6
  • 25
    • 79955836048 scopus 로고    scopus 로고
    • MicroRNA miR-885-5p targets CDK2 and MCM5, activates p53 and inhibits proliferation and survival
    • Afanasyeva EA, Mestdagh P, Kumps C, et al: MicroRNA miR-885-5p targets CDK2 and MCM5, activates p53 and inhibits proliferation and survival. Cell Death Differ 18: 974-984, 2011.
    • (2011) Cell Death Differ , vol.18 , pp. 974-984
    • Afanasyeva, E.A.1    Mestdagh, P.2    Kumps, C.3
  • 26
    • 80055080741 scopus 로고    scopus 로고
    • MicroRNA-192 targeting retino blastoma 1 inhibits cell proliferation and induces cell apoptosis in lung cancer cells
    • Feng S, Cong S, Zhang X, et al: MicroRNA-192 targeting retino blastoma 1 inhibits cell proliferation and induces cell apoptosis in lung cancer cells. Nucleic Acids Res 39: 6669-6678, 2011.
    • (2011) Nucleic Acids Res , vol.39 , pp. 6669-6678
    • Feng, S.1    Cong, S.2    Zhang, X.3
  • 27
    • 79955147117 scopus 로고    scopus 로고
    • Role of miR-224 in hepatocellular carcinoma: A tool for possible therapeutic intervention?
    • Wang Y and Lee CG: Role of miR-224 in hepatocellular carcinoma: a tool for possible therapeutic intervention? Epigenomics 3: 235-243, 2011.
    • (2011) Epigenomics , vol.3 , pp. 235-243
    • Wang, Y.1    Lee, C.G.2
  • 28
    • 81555235150 scopus 로고    scopus 로고
    • MicroRNA 34b as a tumor suppressor in estrogen-dependent growth of breast cancer cells
    • Lee YM, Lee JY, Ho CC, et al: MicroRNA 34b as a tumor suppressor in estrogen-dependent growth of breast cancer cells. Breast Cancer Res 13: R116, 2011.
    • (2011) Breast Cancer Res , vol.13
    • Lee, Y.M.1    Lee, J.Y.2    Ho, C.C.3
  • 29
    • 79953320835 scopus 로고    scopus 로고
    • MicroRNA-95 promotes cell proliferation and targets sorting Nexin 1 in human colorectal carcinoma
    • Huang Z, Huang S, Wang Q, et al: MicroRNA-95 promotes cell proliferation and targets sorting Nexin 1 in human colorectal carcinoma. Cancer Res 71: 2582-2589, 2011.
    • (2011) Cancer Res , vol.71 , pp. 2582-2589
    • Huang, Z.1    Huang, S.2    Wang, Q.3
  • 30
    • 79960565215 scopus 로고    scopus 로고
    • Small RNA sequencing reveals miR-642a-3p as a novel adipocyte-specific microRNA and miR-30 as a key regulator of human adipogen esis
    • Zaragosi LE, Wdziekonski B, Brigand KL, et al: Small RNA sequencing reveals miR-642a-3p as a novel adipocyte-specific microRNA and miR-30 as a key regulator of human adipogen esis. Genome Biol 12: R64, 2011.
    • (2011) Genome Biol , vol.12
    • Zaragosi, L.E.1    Wdziekonski, B.2    Brigand, K.L.3
  • 31
    • 13944282215 scopus 로고    scopus 로고
    • Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
    • Lim LP, Lau NC, Garrett-Engele P, et al: Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 433: 769-773, 2005.
    • (2005) Nature , vol.433 , pp. 769-773
    • Lim, L.P.1    Lau, N.C.2    Garrett-Engele, P.3
  • 32
    • 47149095922 scopus 로고    scopus 로고
    • Morphological changes in intracellular lipid droplets induced by different hepatitis C virus genotype core sequences and relation ship with steatosis
    • Piodi A, Chouteau P, Lerat H, Hezode C and Pawlotsky JM: Morphological changes in intracellular lipid droplets induced by different hepatitis C virus genotype core sequences and relation ship with steatosis. Hepatology 48: 16-27, 2008.
    • (2008) Hepatology , vol.48 , pp. 16-27
    • Piodi, A.1    Chouteau, P.2    Lerat, H.3    Hezode, C.4    Pawlotsky, J.M.5
  • 33
    • 34247636649 scopus 로고    scopus 로고
    • Up-regulation of fatty acid synthase promoter by hepatitis C virus core protein: Genotype-3a core has a stronger effect than genotype-1b core
    • Jackel-Cram C, Babiuk LA and Liu Q: Up-regulation of fatty acid synthase promoter by hepatitis C virus core protein: genotype-3a core has a stronger effect than genotype-1b core. J Hepatol 46: 999-1008, 2007.
    • (2007) J Hepatol , vol.46 , pp. 999-1008
    • Jackel-Cram, C.1    Babiuk, L.A.2    Liu, Q.3
  • 34
    • 43249086785 scopus 로고    scopus 로고
    • Mammalian long-chain acyl-CoA synthetases
    • Maywood
    • Soupene E and Kuypers FA: Mammalian long-chain acyl-CoA synthetases. Exp Biol Med (Maywood) 233: 507-521, 2008.
    • (2008) Exp Biol Med , vol.233 , pp. 507-521
    • Soupene, E.1    Kuypers, F.A.2
  • 35
    • 79961118496 scopus 로고    scopus 로고
    • Regulation of HMG-CoA reductase in mammals and yeast
    • Burg JS and Espenshade PJ: Regulation of HMG-CoA reductase in mammals and yeast. Prog Lipid Res 50: 403-410, 2011.
    • (2011) Prog Lipid Res , vol.50 , pp. 403-410
    • Burg, J.S.1    Espenshade, P.J.2
  • 36
    • 78650928027 scopus 로고    scopus 로고
    • Fbxw7 regulates lipid metabolism and cell fate decisions in the mouse liver
    • Onoyama I, Suzuki A, Matsumoto A, et al: Fbxw7 regulates lipid metabolism and cell fate decisions in the mouse liver. J Clin Invest 121: 342-354, 2010.
    • (2010) J Clin Invest , vol.121 , pp. 342-354
    • Onoyama, I.1    Suzuki, A.2    Matsumoto, A.3
  • 37
    • 0037137346 scopus 로고    scopus 로고
    • Cholesterol homeostasis: Not until the SCAP lady INSIGs
    • Loewen CJ and Levine TP: Cholesterol homeostasis: not until the SCAP lady INSIGs. Curr Biol 12: R779-R781, 2002.
    • (2002) Curr Biol , vol.12
    • Loewen, C.J.1    Levine, T.P.2
  • 38
    • 15944365201 scopus 로고    scopus 로고
    • Caveolin, cholesterol, and lipid bodies
    • Martin S and Parton RG: Caveolin, cholesterol, and lipid bodies. Semin Cell Dev Biol 16: 163-174, 2005.
    • (2005) Semin Cell Dev Biol , vol.16 , pp. 163-174
    • Martin, S.1    Parton, R.G.2
  • 39
    • 69849099831 scopus 로고    scopus 로고
    • Lipid dependence of ABC transporter localization and function
    • Klappe K, Hummel I, Hoekstra D and Kok JW: Lipid dependence of ABC transporter localization and function. Chem Phys Lipids 161: 57-64, 2009.
    • (2009) Chem Phys Lipids , vol.161 , pp. 57-64
    • Klappe, K.1    Hummel, I.2    Hoekstra, D.3    Kok, J.W.4
  • 40
    • 34848887264 scopus 로고    scopus 로고
    • Loss of intestinal fatty acid binding protein increases the susceptibility of male mice to high fat diet-induced fatty liver
    • Agellon LB, Drozdowski L, Li L, et al: Loss of intestinal fatty acid binding protein increases the susceptibility of male mice to high fat diet-induced fatty liver. Biochim Biophys Acta 1771: 1283-1288, 2007.
    • (2007) Biochim Biophys Acta , vol.1771 , pp. 1283-1288
    • Agellon, L.B.1    Drozdowski, L.2    Li, L.3
  • 41
    • 82155179301 scopus 로고    scopus 로고
    • Dietary lipid during the transition period to manipulate subcutaneous adipose tissue peroxisome proliferator-activated receptor-gamma co-regulator and target gene expression
    • Schmitt E, Ballou MA, Correa MN, DePeters EJ, Drackley JK and Loor JJ: Dietary lipid during the transition period to manipulate subcutaneous adipose tissue peroxisome proliferator-activated receptor-gamma co-regulator and target gene expression. J Dairy Sci 94: 5913-5925, 2011.
    • (2011) J Dairy Sci , vol.94 , pp. 5913-5925
    • Schmitt, E.1    Ballou, M.A.2    Correa, M.N.3    DePeters, E.J.4    Drackley, J.K.5    Loor, J.J.6
  • 42
    • 79955941313 scopus 로고    scopus 로고
    • SIRT1 as a potential therapeutic target for treatment of nonalcoholic fatty liver disease
    • Colak Y, Ozturk O, Senates E, et al: SIRT1 as a potential therapeutic target for treatment of nonalcoholic fatty liver disease. Med Sci Monit 17: HY5-HY9, 2011.
    • (2011) Med Sci Monit , vol.17
    • Colak, Y.1    Ozturk, O.2    Senates, E.3
  • 43
    • 41349120730 scopus 로고    scopus 로고
    • Transforming growth factor-beta signaling and ubiquitinators in cancer
    • Glasgow E and Mishra L: Transforming growth factor-beta signaling and ubiquitinators in cancer. Endocr Relat Cancer 15: 59-72, 2008.
    • (2008) Endocr Relat Cancer , vol.15 , pp. 59-72
    • Glasgow, E.1    Mishra, L.2
  • 44
    • 0031902606 scopus 로고    scopus 로고
    • Dysregulation of apoptosis in hepatocellular carcinoma
    • Thorgeirsson SS, Teramoto T and Factor VM: Dysregulation of apoptosis in hepatocellular carcinoma. Semin Liver Dis 18: 115-122, 1998.
    • (1998) Semin Liver Dis , vol.18 , pp. 115-122
    • Thorgeirsson, S.S.1    Teramoto, T.2    Factor, V.M.3
  • 45
    • 41849105045 scopus 로고    scopus 로고
    • Reactivation of the insulin-like growth factor-II signaling pathway in human hepatocellular carcinoma
    • Breuhahn K and Schirmacher P: Reactivation of the insulin-like growth factor-II signaling pathway in human hepatocellular carcinoma. World J Gastroenterol 14: 1690-1698, 2008.
    • (2008) World J Gastroenterol , vol.14 , pp. 1690-1698
    • Breuhahn, K.1    Schirmacher, P.2
  • 46
    • 84857640803 scopus 로고    scopus 로고
    • Dual behavior of HCV core gene in regulation of apoptosis is important in progression of HCC
    • Jahan S, Ashfaq UA, Khaliq S, Samreen B and Afzal N: Dual behavior of HCV core gene in regulation of apoptosis is important in progression of HCC. Infect Genet Evol 12: 236-239, 2012.
    • (2012) Infect Genet Evol , vol.12 , pp. 236-239
    • Jahan, S.1    Ashfaq, U.A.2    Khaliq, S.3    Samreen, B.4    Afzal, N.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.