-
1
-
-
0027068086
-
The natural history of community-acquired hepatitis C in the United States. The Sentinel Counties Chronic non-A, non-B Hepatitis Study Team
-
Alter MJ, Margolis HS, Krawczynski K, Judson FN, Mares A, Alexander WJ, et al. The natural history of community-acquired hepatitis C in the United States. The Sentinel Counties Chronic non-A, non-B Hepatitis Study Team. N Engl J Med 1992; 327: 1899-1905.
-
(1992)
N Engl J Med
, vol.327
, pp. 1899-1905
-
-
Alter, M.J.1
Margolis, H.S.2
Krawczynski, K.3
Judson, F.N.4
Mares, A.5
Alexander, W.J.6
-
2
-
-
0036828784
-
The burden of hepatitis C in the United States
-
Kim WR. The burden of hepatitis C in the United States. HEPATOLOGY 2002; 36: S30-S34.
-
(2002)
HEPATOLOGY
, vol.36
-
-
Kim, W.R.1
-
3
-
-
34548788465
-
Proteomic profiling of human liver biopsies: hepatitis C virus-induced fibrosis and mitochondrial dysfunction
-
Diamond DL, Jacobs JM, Paeper B, Proll SC, Gritsenko MA, Carithers RL Jr, et al. Proteomic profiling of human liver biopsies: hepatitis C virus-induced fibrosis and mitochondrial dysfunction. HEPATOLOGY 2007; 46: 649-657.
-
(2007)
HEPATOLOGY
, vol.46
, pp. 649-657
-
-
Diamond, D.L.1
Jacobs, J.M.2
Paeper, B.3
Proll, S.C.4
Gritsenko, M.A.5
Carithers Jr., R.L.6
-
4
-
-
33747043369
-
HepatoProteomics: applying proteomic technologies to the study of liver function and disease
-
Diamond DL, Proll SC, Jacobs JM, Chan EY, Camp DG 2nd, Smith RD, et al. HepatoProteomics: applying proteomic technologies to the study of liver function and disease. HEPATOLOGY 2006; 44: 299-308.
-
(2006)
HEPATOLOGY
, vol.44
, pp. 299-308
-
-
Diamond, D.L.1
Proll, S.C.2
Jacobs, J.M.3
Chan, E.Y.4
Camp 2nd, D.G.5
Smith, R.D.6
-
5
-
-
19944419128
-
Proteome analysis of liver cells expressing a full-length hepatitis C virus (HCV) replicon and biopsy specimens of posttransplantation liver from HCV-infected patients
-
Jacobs JM, Diamond DL, Chan EY, Gritsenko MA, Qian W, Stastna M, et al. Proteome analysis of liver cells expressing a full-length hepatitis C virus (HCV) replicon and biopsy specimens of posttransplantation liver from HCV-infected patients. J Virol 2005; 79: 7558-7569.
-
(2005)
J Virol
, vol.79
, pp. 7558-7569
-
-
Jacobs, J.M.1
Diamond, D.L.2
Chan, E.Y.3
Gritsenko, M.A.4
Qian, W.5
Stastna, M.6
-
6
-
-
77953560365
-
Host-virus interactions during hepatitis C virus infection: a complex and dynamic molecular biosystem
-
Pezacki JP, Singaravelu R, Lyn RK. Host-virus interactions during hepatitis C virus infection: a complex and dynamic molecular biosystem. Mol Biosyst 2010; 6: 1131-1142.
-
(2010)
Mol Biosyst
, vol.6
, pp. 1131-1142
-
-
Pezacki, J.P.1
Singaravelu, R.2
Lyn, R.K.3
-
7
-
-
60249085215
-
Using high-throughput genomics to study hepatitis C: what determines the outcome of infection?
-
Walters KA, Katze MG. Using high-throughput genomics to study hepatitis C: what determines the outcome of infection? Antiviral Res 2009; 81: 198-208.
-
(2009)
Antiviral Res
, vol.81
, pp. 198-208
-
-
Walters, K.A.1
Katze, M.G.2
-
8
-
-
30044450769
-
Gene expression patterns that correlate with hepatitis C and early progression to fibrosis in liver transplant recipients
-
Smith MW, Walters KA, Korth MJ, Fitzgibbon M, Proll S, Thompson JC, et al. Gene expression patterns that correlate with hepatitis C and early progression to fibrosis in liver transplant recipients. Gastroenterology 2006; 130: 179-187.
-
(2006)
Gastroenterology
, vol.130
, pp. 179-187
-
-
Smith, M.W.1
Walters, K.A.2
Korth, M.J.3
Fitzgibbon, M.4
Proll, S.5
Thompson, J.C.6
-
9
-
-
3843066657
-
Natural history of hepatitis C following liver transplantation
-
Rodriguez-Luna H, Douglas DD. Natural history of hepatitis C following liver transplantation. Curr Opin Infect Dis 2004; 17: 363-371.
-
(2004)
Curr Opin Infect Dis
, vol.17
, pp. 363-371
-
-
Rodriguez-Luna, H.1
Douglas, D.D.2
-
10
-
-
0030695104
-
Histological and clinical outcome after liver transplantation for hepatitis C
-
Shuhart MC, Bronner MP, Gretch DR, Thomassen LV, Wartelle CF, Tateyama H, et al. Histological and clinical outcome after liver transplantation for hepatitis C. HEPATOLOGY 1997; 26: 1646-1652.
-
(1997)
HEPATOLOGY
, vol.26
, pp. 1646-1652
-
-
Shuhart, M.C.1
Bronner, M.P.2
Gretch, D.R.3
Thomassen, L.V.4
Wartelle, C.F.5
Tateyama, H.6
-
11
-
-
0028806153
-
Chronic hepatitis. An update on terminology and reporting
-
Batts KP, Ludwig J. Chronic hepatitis. An update on terminology and reporting. Am J Surg Pathol 1995; 19: 1409-1417.
-
(1995)
Am J Surg Pathol
, vol.19
, pp. 1409-1417
-
-
Batts, K.P.1
Ludwig, J.2
-
12
-
-
76349125478
-
Temporal proteome and lipidome profiles reveal hepatitis C virus-associated reprogramming of hepatocellular metabolism and bioenergetics
-
Diamond DL, Syder AJ, Jacobs JM, Sorensen CM, Walters KA, Proll SC, et al. Temporal proteome and lipidome profiles reveal hepatitis C virus-associated reprogramming of hepatocellular metabolism and bioenergetics. PLoS Pathog 2010; 6: e1000719.
-
(2010)
PLoS Pathog
, vol.6
-
-
Diamond, D.L.1
Syder, A.J.2
Jacobs, J.M.3
Sorensen, C.M.4
Walters, K.A.5
Proll, S.C.6
-
13
-
-
78149378686
-
Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data
-
Webb-Robertson BJ, McCue LA, Waters KM, Matzke MM, Jacobs JM, Metz TO, et al. Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data. J Proteome Res 2010; 9: 5748-5756.
-
(2010)
J Proteome Res
, vol.9
, pp. 5748-5756
-
-
Webb-Robertson, B.J.1
McCue, L.A.2
Waters, K.M.3
Matzke, M.M.4
Jacobs, J.M.5
Metz, T.O.6
-
14
-
-
78650540335
-
New dimensionality reduction methods for the representation of high dimensional 'omics' data
-
Becavin C, Benecke A. New dimensionality reduction methods for the representation of high dimensional 'omics' data. Expert Rev Mol Diagn 2011; 11: 27-34.
-
(2011)
Expert Rev Mol Diagn
, vol.11
, pp. 27-34
-
-
Becavin, C.1
Benecke, A.2
-
15
-
-
79955785606
-
Improving the efficiency of multidimensional scaling in the analysis of high-dimensional data using singular value decomposition
-
Becavin C, Tchitchek N, Mintsa-Eya C, Lesne A, Benecke A. Improving the efficiency of multidimensional scaling in the analysis of high-dimensional data using singular value decomposition. Bioinformatics 2011; 27: 1413-1421.
-
(2011)
Bioinformatics
, vol.27
, pp. 1413-1421
-
-
Becavin, C.1
Tchitchek, N.2
Mintsa-Eya, C.3
Lesne, A.4
Benecke, A.5
-
16
-
-
68849083050
-
Integrated, nontargeted ultrahigh performance liquid chromatography/electrospray ionization tandem mass spectrometry platform for the identification and relative quantification of the small-molecule complement of biological systems
-
Evans AM, DeHaven CD, Barrett T, Mitchell M, Milgram E. Integrated, nontargeted ultrahigh performance liquid chromatography/electrospray ionization tandem mass spectrometry platform for the identification and relative quantification of the small-molecule complement of biological systems. Anal Chem 2009; 81: 6656-6667.
-
(2009)
Anal Chem
, vol.81
, pp. 6656-6667
-
-
Evans, A.M.1
DeHaven, C.D.2
Barrett, T.3
Mitchell, M.4
Milgram, E.5
-
17
-
-
79951792246
-
Plasma metabolomic profile in nonalcoholic fatty liver disease
-
Kalhan SC, Guo L, Edmison J, Dasarathy S, McCullough AJ, Hanson RW, et al. Plasma metabolomic profile in nonalcoholic fatty liver disease. Metabolism 2011; 60: 404-413.
-
(2011)
Metabolism
, vol.60
, pp. 404-413
-
-
Kalhan, S.C.1
Guo, L.2
Edmison, J.3
Dasarathy, S.4
McCullough, A.J.5
Hanson, R.W.6
-
18
-
-
80051643187
-
Metabolomic profile of hepatitis C virus-infected hepatocytes
-
Roe B, Kensicki E, Mohney R, Hall WW. Metabolomic profile of hepatitis C virus-infected hepatocytes. PLoS One 2011; 6: e23641.
-
(2011)
PLoS One
, vol.6
-
-
Roe, B.1
Kensicki, E.2
Mohney, R.3
Hall, W.W.4
-
19
-
-
80655143486
-
Systems virology identifies a mitochondrial fatty acid oxidation enzyme, dodecenoyl coenzyme a delta isomerase, required for hepatitis C virus replication and likely pathogenesis
-
Rasmussen AL, Diamond DL, McDermott JE, Gao X, Metz TO, Matzke MM, et al. Systems virology identifies a mitochondrial fatty acid oxidation enzyme, dodecenoyl coenzyme a delta isomerase, required for hepatitis C virus replication and likely pathogenesis. J Virol 2011; 85: 11646-11654.
-
(2011)
J Virol
, vol.85
, pp. 11646-11654
-
-
Rasmussen, A.L.1
Diamond, D.L.2
McDermott, J.E.3
Gao, X.4
Metz, T.O.5
Matzke, M.M.6
-
20
-
-
40349106161
-
The landscape of human proteins interacting with viruses and other pathogens
-
Dyer MD, Murali TM, Sobral BW. The landscape of human proteins interacting with viruses and other pathogens. PLoS Pathog 2008; 4: e32.
-
(2008)
PLoS Pathog
, vol.4
-
-
Dyer, M.D.1
Murali, T.M.2
Sobral, B.W.3
-
21
-
-
59649108558
-
Bottlenecks and hubs in inferred networks are important for virulence in Salmonella typhimurium
-
McDermott JE, Taylor RC, Yoon H, Heffron F. Bottlenecks and hubs in inferred networks are important for virulence in Salmonella typhimurium. J Comput Biol 2009; 16: 169-180.
-
(2009)
J Comput Biol
, vol.16
, pp. 169-180
-
-
McDermott, J.E.1
Taylor, R.C.2
Yoon, H.3
Heffron, F.4
-
22
-
-
34247622363
-
The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics
-
Yu H, Kim PM, Sprecher E, Trifonov V, Gerstein M. The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics. PLoS Comput Biol 2007; 3: e59.
-
(2007)
PLoS Comput Biol
, vol.3
-
-
Yu, H.1
Kim, P.M.2
Sprecher, E.3
Trifonov, V.4
Gerstein, M.5
-
23
-
-
79960725837
-
Molecular pathways differentiate hepatitis C virus (HCV) recurrence from acute cellular rejection in HCV liver recipients
-
Gehrau R, Maluf D, Archer K, Stravitz R, Suh J, Le N, et al. Molecular pathways differentiate hepatitis C virus (HCV) recurrence from acute cellular rejection in HCV liver recipients. Mol Med 2011; 17: 824-833.
-
(2011)
Mol Med
, vol.17
, pp. 824-833
-
-
Gehrau, R.1
Maluf, D.2
Archer, K.3
Stravitz, R.4
Suh, J.5
Le, N.6
-
24
-
-
77649261101
-
TGF-beta-mediated phosphorylation of hnRNP E1 induces EMT via transcript-selective translational induction of Dab2 and ILEI
-
Chaudhury A, Hussey GS, Ray PS, Jin G, Fox PL, Howe PH. TGF-beta-mediated phosphorylation of hnRNP E1 induces EMT via transcript-selective translational induction of Dab2 and ILEI. Nat Cell Biol 2010; 12: 286-293.
-
(2010)
Nat Cell Biol
, vol.12
, pp. 286-293
-
-
Chaudhury, A.1
Hussey, G.S.2
Ray, P.S.3
Jin, G.4
Fox, P.L.5
Howe, P.H.6
-
26
-
-
79953303497
-
A systems view of epithelial-mesenchymal transition signaling states
-
Thomson S, Petti F, Sujka-Kwok I, Mercado P, Bean J, Monaghan M, et al. A systems view of epithelial-mesenchymal transition signaling states. Clin Exp Metastasis 2011; 28: 137-155.
-
(2011)
Clin Exp Metastasis
, vol.28
, pp. 137-155
-
-
Thomson, S.1
Petti, F.2
Sujka-Kwok, I.3
Mercado, P.4
Bean, J.5
Monaghan, M.6
-
27
-
-
0033618381
-
Role of sphingosine 1-phosphate in the mitogenesis induced by oxidized low density lipoprotein in smooth muscle cells via activation of sphingomyelinase, ceramidase, and sphingosine kinase
-
Auge N, Nikolova-Karakashian M, Carpentier S, Parthasarathy S, Negre-Salvayre A, Salvayre R, et al. Role of sphingosine 1-phosphate in the mitogenesis induced by oxidized low density lipoprotein in smooth muscle cells via activation of sphingomyelinase, ceramidase, and sphingosine kinase. J Biol Chem 1999; 274: 21533-21538.
-
(1999)
J Biol Chem
, vol.274
, pp. 21533-21538
-
-
Auge, N.1
Nikolova-Karakashian, M.2
Carpentier, S.3
Parthasarathy, S.4
Negre-Salvayre, A.5
Salvayre, R.6
-
28
-
-
33745203970
-
Transcriptional profiling reveals novel markers of liver fibrogenesis: gremlin and insulin-like growth factor-binding proteins
-
Boers W, Aarrass S, Linthorst C, Pinzani M, Elferink RO, Bosma P. Transcriptional profiling reveals novel markers of liver fibrogenesis: gremlin and insulin-like growth factor-binding proteins. J Biol Chem 2006; 281: 16289-16295.
-
(2006)
J Biol Chem
, vol.281
, pp. 16289-16295
-
-
Boers, W.1
Aarrass, S.2
Linthorst, C.3
Pinzani, M.4
Elferink, R.O.5
Bosma, P.6
-
29
-
-
78751684022
-
Epigenetic modulation of the protein kinase A RIIalpha (PRKAR2A) gene by histone deacetylases 1 and 2 in human smooth muscle cells
-
Karolczak-Bayatti M, Loughney AD, Robson SC, Europe-Finner GN. Epigenetic modulation of the protein kinase A RIIalpha (PRKAR2A) gene by histone deacetylases 1 and 2 in human smooth muscle cells. J Cell Mol Med 2011; 15: 94-108.
-
(2011)
J Cell Mol Med
, vol.15
, pp. 94-108
-
-
Karolczak-Bayatti, M.1
Loughney, A.D.2
Robson, S.C.3
Europe-Finner, G.N.4
-
30
-
-
57449111690
-
A disulfide-bond A oxidoreductase-like protein (DsbA-L) regulates adiponectin multimerization
-
Liu M, Zhou L, Xu A, Lam KS, Wetzel MD, Xiang R, et al. A disulfide-bond A oxidoreductase-like protein (DsbA-L) regulates adiponectin multimerization. Proc Natl Acad Sci U S A 2008; 105: 18302-18307.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 18302-18307
-
-
Liu, M.1
Zhou, L.2
Xu, A.3
Lam, K.S.4
Wetzel, M.D.5
Xiang, R.6
-
31
-
-
84860399429
-
TCERG1 inhibits C/EBPalpha through a mechanism that does not involve sequestration of C/EBPalpha at pericentromeric heterochromatin
-
Moazed B, Banman SL, Wilkinson GA, Roesler WJ. TCERG1 inhibits C/EBPalpha through a mechanism that does not involve sequestration of C/EBPalpha at pericentromeric heterochromatin. J Cell Biochem 2011; 112: 2317-2326.
-
(2011)
J Cell Biochem
, vol.112
, pp. 2317-2326
-
-
Moazed, B.1
Banman, S.L.2
Wilkinson, G.A.3
Roesler, W.J.4
-
32
-
-
65449125801
-
Detection of novel biomarkers of liver cirrhosis by proteomic analysis
-
Molleken C, Sitek B, Henkel C, Poschmann G, Sipos B, Wiese S, et al. Detection of novel biomarkers of liver cirrhosis by proteomic analysis. HEPATOLOGY 2009; 49: 1257-1266.
-
(2009)
HEPATOLOGY
, vol.49
, pp. 1257-1266
-
-
Molleken, C.1
Sitek, B.2
Henkel, C.3
Poschmann, G.4
Sipos, B.5
Wiese, S.6
-
33
-
-
79960743857
-
Genomewide microRNA down-regulation as a negative feedback mechanism in the early phases of liver regeneration
-
Shu J, Kren BT, Xia Z, Wong PY, Li L, Hanse EA, et al. Genomewide microRNA down-regulation as a negative feedback mechanism in the early phases of liver regeneration. HEPATOLOGY 2011; 54: 609-619.
-
(2011)
HEPATOLOGY
, vol.54
, pp. 609-619
-
-
Shu, J.1
Kren, B.T.2
Xia, Z.3
Wong, P.Y.4
Li, L.5
Hanse, E.A.6
-
34
-
-
0345711548
-
Poly(C)-binding protein interacts with the hepatitis C virus 5' untranslated region
-
Spangberg K, Schwartz S. Poly(C)-binding protein interacts with the hepatitis C virus 5' untranslated region. J Gen Virol 1999; 80: 1371-1376.
-
(1999)
J Gen Virol
, vol.80
, pp. 1371-1376
-
-
Spangberg, K.1
Schwartz, S.2
-
35
-
-
84863508882
-
Early transcriptional programming links progression to hepatitis C virus-induced severe liver disease in transplant patients
-
Rasmussen AL, Tchitchek N, Susnow NJ, Krasnoselsky AL, Diamond DL, Yeh MM, et al. Early transcriptional programming links progression to hepatitis C virus-induced severe liver disease in transplant patients. Hepatology 2012; 56: 28-38.
-
(2012)
Hepatology
, vol.56
, pp. 28-38
-
-
Rasmussen, A.L.1
Tchitchek, N.2
Susnow, N.J.3
Krasnoselsky, A.L.4
Diamond, D.L.5
Yeh, M.M.6
-
36
-
-
80051623540
-
Serum metabolomics reveals gamma-glutamyl dipeptides as biomarkers for discrimination among different forms of liver disease
-
Soga T, Sugimoto M, Honma M, Mori M, Igarashi K, Kashikura K, et al. Serum metabolomics reveals gamma-glutamyl dipeptides as biomarkers for discrimination among different forms of liver disease. J Hepatol 2011; 55: 896-905.
-
(2011)
J Hepatol
, vol.55
, pp. 896-905
-
-
Soga, T.1
Sugimoto, M.2
Honma, M.3
Mori, M.4
Igarashi, K.5
Kashikura, K.6
-
37
-
-
19044385595
-
Cystathionine beta synthase deficiency promotes oxidative stress, fibrosis, and steatosis in mice liver
-
Robert K, Nehme J, Bourdon E, Pivert G, Friguet B, Delcayre C, et al. Cystathionine beta synthase deficiency promotes oxidative stress, fibrosis, and steatosis in mice liver. Gastroenterology 2005; 128: 1405-1415.
-
(2005)
Gastroenterology
, vol.128
, pp. 1405-1415
-
-
Robert, K.1
Nehme, J.2
Bourdon, E.3
Pivert, G.4
Friguet, B.5
Delcayre, C.6
-
38
-
-
33745209659
-
Differential metabolomics reveals ophthalmic acid as an oxidative stress biomarker indicating hepatic glutathione consumption
-
Soga T, Baran R, Suematsu M, Ueno Y, Ikeda S, Sakurakawa T, et al. Differential metabolomics reveals ophthalmic acid as an oxidative stress biomarker indicating hepatic glutathione consumption. J Biol Chem 2006; 281: 16768-16776.
-
(2006)
J Biol Chem
, vol.281
, pp. 16768-16776
-
-
Soga, T.1
Baran, R.2
Suematsu, M.3
Ueno, Y.4
Ikeda, S.5
Sakurakawa, T.6
-
39
-
-
77953675546
-
Oxidative stress and nutritional factors in hepatitis C virus-positive liver recipients, controls, and hepatitis C virus-positive nontransplant patients
-
Madill J, Arendt B, Aghdassi E, Chow C, Guindi M, Therapondos G, et al. Oxidative stress and nutritional factors in hepatitis C virus-positive liver recipients, controls, and hepatitis C virus-positive nontransplant patients. Transplant Proc 2010; 42: 1744-1749.
-
(2010)
Transplant Proc
, vol.42
, pp. 1744-1749
-
-
Madill, J.1
Arendt, B.2
Aghdassi, E.3
Chow, C.4
Guindi, M.5
Therapondos, G.6
-
40
-
-
56149115918
-
Hepatitis C virus-induced oxidative stress suppresses hepcidin expression through increased histone deacetylase activity
-
Miura K, Taura K, Kodama Y, Schnabl B, Brenner DA. Hepatitis C virus-induced oxidative stress suppresses hepcidin expression through increased histone deacetylase activity. HEPATOLOGY 2008; 48: 1420-1429.
-
(2008)
HEPATOLOGY
, vol.48
, pp. 1420-1429
-
-
Miura, K.1
Taura, K.2
Kodama, Y.3
Schnabl, B.4
Brenner, D.A.5
-
41
-
-
0033055983
-
A histone deacetylase inhibitor, trichostatin A, suppresses myofibroblastic differentiation of rat hepatic stellate cells in primary culture
-
Niki T, Rombouts K, De Bleser P, De Smet K, Rogiers V, Schuppan D, et al. A histone deacetylase inhibitor, trichostatin A, suppresses myofibroblastic differentiation of rat hepatic stellate cells in primary culture. HEPATOLOGY 1999; 29: 858-867.
-
(1999)
HEPATOLOGY
, vol.29
, pp. 858-867
-
-
Niki, T.1
Rombouts, K.2
De Bleser, P.3
De Smet, K.4
Rogiers, V.5
Schuppan, D.6
-
43
-
-
79953196869
-
A humanized mouse model to study hepatitis C virus infection, immune response, and liver disease
-
Washburn ML, Bility MT, Zhang L, Kovalev GI, Buntzman A, Frelinger JA, et al. A humanized mouse model to study hepatitis C virus infection, immune response, and liver disease. Gastroenterology 2011; 140: 1334-1344.
-
(2011)
Gastroenterology
, vol.140
, pp. 1334-1344
-
-
Washburn, M.L.1
Bility, M.T.2
Zhang, L.3
Kovalev, G.I.4
Buntzman, A.5
Frelinger, J.A.6
|