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Volumn 46, Issue 8, 2012, Pages 2772-2782

Profiling bulking and foaming bacteria in activated sludge by high throughput sequencing

Author keywords

Activated sludge; Bacteria; Bulking; Foaming; High throughput sequencing

Indexed keywords

ACTIVATED SLUDGE PROCESS; GENES; OLIGONUCLEOTIDES; RNA; THROUGHPUT; WASTEWATER TREATMENT;

EID: 84863412215     PISSN: 00431354     EISSN: 18792448     Source Type: Journal    
DOI: 10.1016/j.watres.2012.02.039     Document Type: Article
Times cited : (180)

References (57)
  • 2
    • 0028946084 scopus 로고
    • Phylogenetic identification and in-situ detection of individual microbial cells without cultivation
    • Amann R.I., Ludwig W., Schleifer K.H. Phylogenetic identification and in-situ detection of individual microbial cells without cultivation. Microbiological Reviews 1995, 59:143-169.
    • (1995) Microbiological Reviews , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 3
    • 0037022424 scopus 로고    scopus 로고
    • Phylogeny of the filamentous bacterium Eikelboom Type 1851, and design and application of a 16S rRND targeted oligonucleotide probe for its fluorescence in situ identification in activated sludge
    • Beer M., Seviour E.M., Kong Y., Cunningham M., Blackall L.L., Seviour R.J. Phylogeny of the filamentous bacterium Eikelboom Type 1851, and design and application of a 16S rRND targeted oligonucleotide probe for its fluorescence in situ identification in activated sludge. FEMS Microbiology Letters 2002, 207(2):179-183.
    • (2002) FEMS Microbiology Letters , vol.207 , Issue.2 , pp. 179-183
    • Beer, M.1    Seviour, E.M.2    Kong, Y.3    Cunningham, M.4    Blackall, L.L.5    Seviour, R.J.6
  • 4
    • 0028167607 scopus 로고
    • Molecular-identification of activated-sludge foaming bacteria
    • Blackall L.L. Molecular-identification of activated-sludge foaming bacteria. Water Science and Technology 1994, 29:35-42.
    • (1994) Water Science and Technology , vol.29 , pp. 35-42
    • Blackall, L.L.1
  • 5
    • 0011129440 scopus 로고    scopus 로고
    • Bulking
    • Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Blackall L.L. Bulking. The Microbiology of Activated Sludge 1999, 147-161. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1999) The Microbiology of Activated Sludge , pp. 147-161
    • Blackall, L.L.1
  • 6
    • 0026065945 scopus 로고
    • Foaming in activated-sludge plants - a survey in Queensland, Australia and an evaluation of some control strategies
    • Blackall L.L., Harbers A.E., Greenfield P.F., Hayward A.C. Foaming in activated-sludge plants - a survey in Queensland, Australia and an evaluation of some control strategies. Water Research 1991, 25:313-317.
    • (1991) Water Research , vol.25 , pp. 313-317
    • Blackall, L.L.1    Harbers, A.E.2    Greenfield, P.F.3    Hayward, A.C.4
  • 8
    • 0021855013 scopus 로고
    • Control of activated sludge filamentous bulking. 6. Formulation of basic principles
    • Chudoba J. Control of activated sludge filamentous bulking. 6. Formulation of basic principles. Water Research 1985, 19(8):1017-1022.
    • (1985) Water Research , vol.19 , Issue.8 , pp. 1017-1022
    • Chudoba, J.1
  • 10
  • 11
    • 0016495388 scopus 로고
    • Filamentous organisms observed in activated sludge
    • Eikelboom D.H. Filamentous organisms observed in activated sludge. Water Research 1975, 9:365-388.
    • (1975) Water Research , vol.9 , pp. 365-388
    • Eikelboom, D.H.1
  • 12
    • 0030839001 scopus 로고    scopus 로고
    • Development and use of fluorescent in situ hybridization probes for the detection and identification of "Microthrix parvicella" in activated sludge
    • Erhart R., Bradford D., Seviour R.J., Amann R., Blackall L.L. Development and use of fluorescent in situ hybridization probes for the detection and identification of "Microthrix parvicella" in activated sludge. Systematic and Applied Microbiology 1997, 20:310-318.
    • (1997) Systematic and Applied Microbiology , vol.20 , pp. 310-318
    • Erhart, R.1    Bradford, D.2    Seviour, R.J.3    Amann, R.4    Blackall, L.L.5
  • 15
    • 34748886657 scopus 로고    scopus 로고
    • PAST: paleontological statistics software package for education and data analysis
    • Hammer Ø., Harper D.A.T., Ryan P.D. PAST: paleontological statistics software package for education and data analysis. Paleontologia Electronica 2001, 4:1-9.
    • (2001) Paleontologia Electronica , vol.4 , pp. 1-9
    • Hammer, Ø.1    Harper, D.A.T.2    Ryan, P.D.3
  • 16
    • 0031832134 scopus 로고    scopus 로고
    • Phylogenetic assessement of five filamentous bacteria isolated from bulking activated sludges
    • Howarth R., Head I.M., Unz R.F. Phylogenetic assessement of five filamentous bacteria isolated from bulking activated sludges. Water Science and Technology 1998, 37:4-5.
    • (1998) Water Science and Technology , vol.37 , pp. 4-5
    • Howarth, R.1    Head, I.M.2    Unz, R.F.3
  • 17
    • 0032748483 scopus 로고    scopus 로고
    • Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp nov., Thiothrix unzii sp nov., Thiothrix fructosiviorans sp nov and Thiothrix defluvii sp nov
    • Howarth R., Unz R.F., Seviour E.M., Seviour R.J., Blackall L.L., Pickup R.W., Jones J.G., Yaguchi J., Head I.M. Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp nov., Thiothrix unzii sp nov., Thiothrix fructosiviorans sp nov and Thiothrix defluvii sp nov. International Journal of Systematic Bacteriology 1999, 49:1817-1827.
    • (1999) International Journal of Systematic Bacteriology , vol.49 , pp. 1817-1827
    • Howarth, R.1    Unz, R.F.2    Seviour, E.M.3    Seviour, R.J.4    Blackall, L.L.5    Pickup, R.W.6    Jones, J.G.7    Yaguchi, J.8    Head, I.M.9
  • 18
    • 0035163571 scopus 로고    scopus 로고
    • Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives
    • Hugenholtz P., Tyson G.W., Webb R.I., Wagner A.M., Blackall L.L. Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives. Applied and Environmental Microbiology 2001, 67:411-419.
    • (2001) Applied and Environmental Microbiology , vol.67 , pp. 411-419
    • Hugenholtz, P.1    Tyson, G.W.2    Webb, R.I.3    Wagner, A.M.4    Blackall, L.L.5
  • 19
    • 0026709894 scopus 로고
    • Towards a comprehensive model of activated sludge bulking and foaming
    • Jenkins D. Towards a comprehensive model of activated sludge bulking and foaming. Water Science and Technology 1992, 25(6):215-230.
    • (1992) Water Science and Technology , vol.25 , Issue.6 , pp. 215-230
    • Jenkins, D.1
  • 22
    • 0033754288 scopus 로고    scopus 로고
    • Phylogenetic analysis of and oligonucleotide probe development for Eikelboom type 021N filamentous bacteria isolated from bulking activated sludge
    • Kanagawa T., Kamagata Y., Aruga S., Kohno T., Horn M., Wagner M. Phylogenetic analysis of and oligonucleotide probe development for Eikelboom type 021N filamentous bacteria isolated from bulking activated sludge. Applied and Environmental Microbiology 2000, 66(11):5043-5052.
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.11 , pp. 5043-5052
    • Kanagawa, T.1    Kamagata, Y.2    Aruga, S.3    Kohno, T.4    Horn, M.5    Wagner, M.6
  • 23
    • 0036024742 scopus 로고    scopus 로고
    • Characterization of type 1851 organism isolated from activated sludge samples
    • Kohno T., Sei K., Mori K. Characterization of type 1851 organism isolated from activated sludge samples. Water Science and Technology 2002, 46:111-114.
    • (2002) Water Science and Technology , vol.46 , pp. 111-114
    • Kohno, T.1    Sei, K.2    Mori, K.3
  • 24
    • 79955658957 scopus 로고    scopus 로고
    • Eikelboom's morphotype 0803 in activated sludge belongs to the genus Caldilinea in the phylum Chloroflexi
    • Kragelund C., Thomsen T.R., Mielczarek A.T., Nielsen P.H. Eikelboom's morphotype 0803 in activated sludge belongs to the genus Caldilinea in the phylum Chloroflexi. FEMS Microbiology Ecology 2011, 76(3):451-462.
    • (2011) FEMS Microbiology Ecology , vol.76 , Issue.3 , pp. 451-462
    • Kragelund, C.1    Thomsen, T.R.2    Mielczarek, A.T.3    Nielsen, P.H.4
  • 25
    • 67650744566 scopus 로고    scopus 로고
    • Application of quantitative RT-PCR to determine the distribution of Microthrix parvicella in full-scale activated sludge treatment systems
    • Kumari S.K.S., Marrengane Z., Bux F. Application of quantitative RT-PCR to determine the distribution of Microthrix parvicella in full-scale activated sludge treatment systems. Applied Microbiology and Biotechnology 2009, 83(6):1135-1141.
    • (2009) Applied Microbiology and Biotechnology , vol.83 , Issue.6 , pp. 1135-1141
    • Kumari, S.K.S.1    Marrengane, Z.2    Bux, F.3
  • 26
    • 78650824224 scopus 로고    scopus 로고
    • Bacterial community composition and diversity of a full-scale integrated fixed-film activated sludge system as investigated by pyrosequencing
    • Kwon S., Kim T.S., Yu G.H., Jung J.H., Park H.D. Bacterial community composition and diversity of a full-scale integrated fixed-film activated sludge system as investigated by pyrosequencing. Journal of Microbiology and Biotechnology 2010, 20:1717-1723.
    • (2010) Journal of Microbiology and Biotechnology , vol.20 , pp. 1717-1723
    • Kwon, S.1    Kim, T.S.2    Yu, G.H.3    Jung, J.H.4    Park, H.D.5
  • 27
    • 33746776930 scopus 로고    scopus 로고
    • Phylogeny, physiology and distribution of 'Candidatus Microthrix calida', a new Microthrix species isolated from industrial activated sludge wastewater treatment plants
    • Levantesi C., Rossetti S., Thelen K., Kragelund C., Krooneman J., Eikelboom D., Nielsen P.H., Tandoi V. Phylogeny, physiology and distribution of 'Candidatus Microthrix calida', a new Microthrix species isolated from industrial activated sludge wastewater treatment plants. Environmental Microbiology 2006, 8:1552-1563.
    • (2006) Environmental Microbiology , vol.8 , pp. 1552-1563
    • Levantesi, C.1    Rossetti, S.2    Thelen, K.3    Kragelund, C.4    Krooneman, J.5    Eikelboom, D.6    Nielsen, P.H.7    Tandoi, V.8
  • 28
    • 0035206494 scopus 로고    scopus 로고
    • Design and application of oligonucleotide probes for fluorescent in situ identification of the filamentous bacterial morphotype Nostocoida limicola in activated sludge
    • Liu J.R., Seviour R.J. Design and application of oligonucleotide probes for fluorescent in situ identification of the filamentous bacterial morphotype Nostocoida limicola in activated sludge. Environmental Microbiology 2001, 3:551-560.
    • (2001) Environmental Microbiology , vol.3 , pp. 551-560
    • Liu, J.R.1    Seviour, R.J.2
  • 29
    • 0034490015 scopus 로고    scopus 로고
    • The filamentous bacterial morphotype 'Nostocoida limicola' I contains at least two previously described genera in the low G+C gram positive bacteria
    • Liu J.R., Burrell P., Seviour E.M., Soddell J.A., Blackall L.L., Seviour R.J. The filamentous bacterial morphotype 'Nostocoida limicola' I contains at least two previously described genera in the low G+C gram positive bacteria. Systematic and Applied Microbiology 2000, 23:528-534.
    • (2000) Systematic and Applied Microbiology , vol.23 , pp. 528-534
    • Liu, J.R.1    Burrell, P.2    Seviour, E.M.3    Soddell, J.A.4    Blackall, L.L.5    Seviour, R.J.6
  • 31
    • 0036021950 scopus 로고    scopus 로고
    • Emended description of the genus Trichococcus, description of Trichococcus collinsii sp. nov., and reclassification of Lactosphaera pasteurii as Trichococcus pasteurii comb. nov and of Ruminococcus palustris as Trichococcus palustris comb. nov in the low-G+C Gram-positive bacteria
    • Liu J.R., Tanner R.S., Schumann P., Weiss N., McKenzie C.A., Janssen P.H., Seviour E.M., Lawson P.A., Allen T.D., Seviour R.J. Emended description of the genus Trichococcus, description of Trichococcus collinsii sp. nov., and reclassification of Lactosphaera pasteurii as Trichococcus pasteurii comb. nov and of Ruminococcus palustris as Trichococcus palustris comb. nov in the low-G+C Gram-positive bacteria. International Journal of Systematic and Evolutionary Microbiology 2002, 52:1113-1126.
    • (2002) International Journal of Systematic and Evolutionary Microbiology , vol.52 , pp. 1113-1126
    • Liu, J.R.1    Tanner, R.S.2    Schumann, P.3    Weiss, N.4    McKenzie, C.A.5    Janssen, P.H.6    Seviour, E.M.7    Lawson, P.A.8    Allen, T.D.9    Seviour, R.J.10
  • 35
    • 0028916092 scopus 로고
    • Molecular characterization of nocardiaform Actinomycetes in activated sludge by 16S ribosomal-RNA analysis
    • Schuppler M., Mertens F., Schon G., Gobel U.B. Molecular characterization of nocardiaform Actinomycetes in activated sludge by 16S ribosomal-RNA analysis. Microbiology-UK 1995, 141:513-521.
    • (1995) Microbiology-UK , vol.141 , pp. 513-521
    • Schuppler, M.1    Mertens, F.2    Schon, G.3    Gobel, U.B.4
  • 36
    • 0031983644 scopus 로고    scopus 로고
    • In situ identification of nocardioform Actinomycetes in activated sludge using fluorescent rRNA-targeted oligonucleotide probes
    • Schuppler M., Wagner M., Schon G., Gobel U.B. In situ identification of nocardioform Actinomycetes in activated sludge using fluorescent rRNA-targeted oligonucleotide probes. Microbiology-UK 1998, 144:249-259.
    • (1998) Microbiology-UK , vol.144 , pp. 249-259
    • Schuppler, M.1    Wagner, M.2    Schon, G.3    Gobel, U.B.4
  • 37
    • 0001943769 scopus 로고    scopus 로고
    • Current taxonomic status of filamentous bacteria found in activated sludge plants
    • Kluwer Academic Publishers, Dordrecht, Netherlands
    • Seviour R.J., Blackall L.L. Current taxonomic status of filamentous bacteria found in activated sludge plants. The Microbiology of Activated Sludge 1999, 122-146. Kluwer Academic Publishers, Dordrecht, Netherlands.
    • (1999) The Microbiology of Activated Sludge , pp. 122-146
    • Seviour, R.J.1    Blackall, L.L.2
  • 39
    • 0020842580 scopus 로고
    • Microthrix parvicella, a filamentous bacterium isolated from activated sludge: cultivation in a chemically defined medium
    • Slijkhuis H. Microthrix parvicella, a filamentous bacterium isolated from activated sludge: cultivation in a chemically defined medium. Applied and Environmental Microbiology 1983, 46(4):832-839.
    • (1983) Applied and Environmental Microbiology , vol.46 , Issue.4 , pp. 832-839
    • Slijkhuis, H.1
  • 40
    • 2142676660 scopus 로고    scopus 로고
    • Foaming
    • Kluwer Academic Publishers, Dordrecht, Netherlands
    • Soddell J.A. Foaming. The Microbiology of Activated Sludge 1999, 161-202. Kluwer Academic Publishers, Dordrecht, Netherlands.
    • (1999) The Microbiology of Activated Sludge , pp. 161-202
    • Soddell, J.A.1
  • 41
    • 0025179221 scopus 로고
    • Microbiology of foaming in activated sludge plants
    • Soddell J.A., Seviour R.J. Microbiology of foaming in activated sludge plants. Journal of Applied Bacteriology 1990, 69(2):145-176.
    • (1990) Journal of Applied Bacteriology , vol.69 , Issue.2 , pp. 145-176
    • Soddell, J.A.1    Seviour, R.J.2
  • 42
    • 64749108521 scopus 로고    scopus 로고
    • Filamentous bacterium Eikelboom Type 0092 in activated sludge plants in Australia is a member of the phylum Chloroflexi
    • Speirs L., Nittami T., Mcllroy S., Schroeder S., Seviour R.J. Filamentous bacterium Eikelboom Type 0092 in activated sludge plants in Australia is a member of the phylum Chloroflexi. Applied and Environmental Microbiology 2009, 75(8):2446-2452.
    • (2009) Applied and Environmental Microbiology , vol.75 , Issue.8 , pp. 2446-2452
    • Speirs, L.1    Nittami, T.2    Mcllroy, S.3    Schroeder, S.4    Seviour, R.J.5
  • 45
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics análisis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics análisis (MEGA) software version 4.0. Molecular Biology and Evolution 2007, 24:1596-1599.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 47
    • 33746685756 scopus 로고    scopus 로고
    • Identity, abundance and physiology of Aquaspirillum-related filamentous bacteria in activated sludge
    • Thomsen T.R., Kragelund C., Nielsen P.H. Identity, abundance and physiology of Aquaspirillum-related filamentous bacteria in activated sludge. Water Science and Technology 2006, 53:237-245.
    • (2006) Water Science and Technology , vol.53 , pp. 237-245
    • Thomsen, T.R.1    Kragelund, C.2    Nielsen, P.H.3
  • 48
    • 0027596185 scopus 로고
    • Bioflocculation in activated sludge - an analytic approach
    • Urbain V., Block J.C., Manem J. Bioflocculation in activated sludge - an analytic approach. Water Research 1993, 27(5):829-838.
    • (1993) Water Research , vol.27 , Issue.5 , pp. 829-838
    • Urbain, V.1    Block, J.C.2    Manem, J.3
  • 49
    • 0023348121 scopus 로고
    • The Competitive growth of Zoogloea ramigera and Type 021N in activated sludge and pure culture: a model for low F: M bulking
    • van Niekerk A.M., Jenkins D., Richard M.G. The Competitive growth of Zoogloea ramigera and Type 021N in activated sludge and pure culture: a model for low F: M bulking. Journal of Water Pollution Control Federation 1993, 59:262-273.
    • (1993) Journal of Water Pollution Control Federation , vol.59 , pp. 262-273
    • van Niekerk, A.M.1    Jenkins, D.2    Richard, M.G.3
  • 50
    • 0028271364 scopus 로고
    • Development of a rebosomal-RNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in-situ monitoring in activated-sludge
    • Wagner M., Erhart R., Manz W., Amann R., Lemmer H., Wedi D., Schleifer K.H. Development of a rebosomal-RNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in-situ monitoring in activated-sludge. Applied and Environmental Microbiology 1994, 60(3):792-800.
    • (1994) Applied and Environmental Microbiology , vol.60 , Issue.3 , pp. 792-800
    • Wagner, M.1    Erhart, R.2    Manz, W.3    Amann, R.4    Lemmer, H.5    Wedi, D.6    Schleifer, K.H.7
  • 52
    • 0024703211 scopus 로고
    • Identification of filamentous microorganisms from activated sludge - a compromise between wishes, needs and possibilities
    • Wanner J., Grau P. Identification of filamentous microorganisms from activated sludge - a compromise between wishes, needs and possibilities. Water Research 1989, 23(7):883-891.
    • (1989) Water Research , vol.23 , Issue.7 , pp. 883-891
    • Wanner, J.1    Grau, P.2
  • 54
    • 0021844241 scopus 로고
    • Isolation and characterization of filamentous bacteria present in bulking activated sludge
    • Williams T.M., Unz R.F. Isolation and characterization of filamentous bacteria present in bulking activated sludge. Applied Microbiology and Biotechnology 1985, 22:273-282.
    • (1985) Applied Microbiology and Biotechnology , vol.22 , pp. 273-282
    • Williams, T.M.1    Unz, R.F.2
  • 55
    • 0024505304 scopus 로고
    • The nutrition of Thiothrix, Type-021N, Beggiatia and Leucothrix strains
    • Williams T.M., Unz R.F. The nutrition of Thiothrix, Type-021N, Beggiatia and Leucothrix strains. Water Research 1989, 23:15-22.
    • (1989) Water Research , vol.23 , pp. 15-22
    • Williams, T.M.1    Unz, R.F.2
  • 56
    • 80052240448 scopus 로고    scopus 로고
    • Pathogenic bacteria in sewage treatment plants as revealed by 454 pyrosequencing
    • Ye L., Zhang T. Pathogenic bacteria in sewage treatment plants as revealed by 454 pyrosequencing. Environmental Science and Technology 2011, 45(17):7173-7179.
    • (2011) Environmental Science and Technology , vol.45 , Issue.17 , pp. 7173-7179
    • Ye, L.1    Zhang, T.2
  • 57
    • 0025570193 scopus 로고
    • Isolation and morphological and cytological characteriazation of filamentous bacteria from bulking sludge
    • Ziegler M., Lange M., Dott W. Isolation and morphological and cytological characteriazation of filamentous bacteria from bulking sludge. Water Research 1982, 24:1437-1451.
    • (1982) Water Research , vol.24 , pp. 1437-1451
    • Ziegler, M.1    Lange, M.2    Dott, W.3


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