Evaluation of gene expression profiles and pathways underlying postnatal development in mouse sclera

Molecular Vision

Volumn 18, Issue , 2012, Pages 1436-1448

  Lim, Wan'E ^a   Kwan, Jia Lin ^a   Goh, Liang Kee ^b,c   Beuerman, Roger W ^a,b,c   Barathi, Veluchamy A ^a,c  

^a SINGAPORE EYE RESEARCH INSTITUTE   (Singapore)

^b DUKE NUS MEDICAL SCHOOL   (Singapore)

^c NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1ALPHA;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DEVELOPMENTAL STAGE; EYE DEVELOPMENT; GENE; GENE CLUSTER; GENE EXPRESSION PROFILING; GENE INTERACTION; GENETIC TRANSCRIPTION; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PERINATAL PERIOD; POSTNATAL DEVELOPMENT; PPARGC1A GENE; PRIORITY JOURNAL; SCLERA;

ANIMALS; ANIMALS, NEWBORN; EYE PROTEINS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE REGULATORY NETWORKS; GENOME; MICE; MICE, INBRED BALB C; MULTIGENE FAMILY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SCLERA; SOFTWARE; TIME FACTORS; TRANS-ACTIVATORS;

EID: 84863330634     PISSN: None     EISSN: 10900535     Source Type: Journal    
DOI: None     Document Type: Article

References (31)

1. Rada JA, Shelton S, Norton TT. The sclera and myopia. Exp Eye Res 2006; 82:185-200. [PMID: 16202407]
2. Curtin BJ. The mopias: Basic sience and cinical mnagement. Philadelphia: Harper & Row; 1985.
3. McBrien NA, Gentle A. Role of the sclera in the development and pathological complications of myopia. Prog Retin Eye Res 2003; 22:307-38. [PMID: 12852489]
4. Young TL, Scavello GS, Paluru PC, Choi JD, Rappaport EF, Rada JA. Microarray analysis of gene expression in human donor sclera. Mol Vis 2004; 10:163-76. [PMID: 15041956]
5. Smith RS, John SWM, Nishina PM, Sundberg JP. Systematic Evaluation of the Mouse Eye: Anatomy, Pathology, and Biomethods. CRC Press; 2002.
6. Zhou J, Rappaport EF, Tobias JW, Young TL. Differential gene expression in mouse sclera during ocular development. Invest Ophthalmol Vis Sci 2006; 47:1794-802. [PMID: 16638983]
7. Wu F, Lee S, Schumacher M, Jun A, Chakravarti S. Differential gene expression patterns of the developing and adult mouse cornea compared to the lens and tendon. Exp Eye Res 2008; 87:214-25. [PMID: 18582462]
8. Rada JA, Achen VR, Penugonda S, Schmidt RW, Mount BA. Proteoglycan composition in the human sclera during growth and aging. Invest Ophthalmol Vis Sci 2000; 41:1639-48. [PMID: 10845580]
9. van Heyningen V. Developmental eye disease-a genome era paradigm. Clin Genet 1998; 54:272-82. [PMID: 9831337]
10. Brink N, Szamel M, Young AR, Wittern KP, Bergemann J. Comparative quantification of IL-1beta, IL-10, IL-10r, TNFalpha and IL-7 mRNA levels in UV-irradiated human skin in vivo. Inflamm Res 2000; 49:290-6. [PMID: 10939619]
11. Moe TK, Ziliang J, Barathi A, Beuerman RW. Differential expression of glyceraldehyde-3-phosphate dehydrogenase (GAPDH), beta actin and hypoxanthine phosphoribosyltransferase (HPRT) in postnatal rabbit sclera. Curr Eye Res 2001; 23:44-50. [PMID: 11821985]
12. Etienne W, Meyer MH, Peppers J, Meyer RA Jr. Comparison of mRNA gene expression by RT-PCR and DNA microarray. Biotechniques 2004; 36:618-20. [PMID: 15088380]
13. Barathi A, Thu MK, Beuerman RW. Dimensional growth of the rabbit eye. Cells Tissues Organs 2002; 171:276-85. [PMID: 12169825]
14. Barathi VA, Boopathi VG, Yap EP, Beuerman RW. Two models of experimental myopia in the mouse. Vision Res 2008; 48:904-16. [PMID: 18289630]
15. Dorrell MI, Aguilar E, Weber C, Friedlander M. Global gene expression analysis of the developing postnatal mouse retina. Invest Ophthalmol Vis Sci 2004; 45:1009-19. [PMID: 14985324]
16. Ihanamäki T, Salminen H, Säämänen AM, Pelliniemi LJ, Hartmann DJ, Sandberg-Lall M, Vuorio E. Age-dependent changes in the expression of matrix components in the mouse eye. Exp Eye Res 2001; 72:423-31. [PMID: 11273670]
17. Lee RE, Davison PF. Collagen composition and turnover in ocular tissues of the rabbit. Exp Eye Res 1981; 32:737-45. [PMID: 7250223]
18. Kane BP, Jester JV, Huang J, Wahlert A, Hassell JR. IGF-II and collagen expression by keratocytes during postnatal development. Exp Eye Res 2009; 89:218-23. [PMID: 19328782]
19. Hassell JR, Kane BP, Etheredge LT, Valkov N, Birk DE. Increased stromal extracellular matrix synthesis and assembly by insulin activated bovine keratocytes cultured under agarose. Exp Eye Res 2008; 87:604-11. [PMID: 18938157]
20. Gupta D, Harvey SA, Kaminski N, Swamynathan SK. Mouse conjunctival forniceal gene expression during postnatal development and its regulation by Kruppel-like factor 4. Invest Ophthalmol Vis Sci 52; 52:4951-62. [PMID: 21398290]
21. Jordan CD, Charbonneau NL, Sakai LY. Fibrillin microfibrils: connective tissue pathways that regulate shape and signaling. J Musculoskelet Neuronal Interact 2006; 6:366-7. [PMID: 17185827]
22. Charbonneau NL, Dzamba BJ, Ono RN, Keene DR, Corson GM, Reinhardt DP, Sakai LY. Fibrillins can co-assemble in fibrils, but fibrillin fibril composition displays cell-specific differences. J Biol Chem 2003; 278:2740-9. [PMID: 12429739]
23. Hackel PO, Zwick E, Prenzel N, Ullrich A. Epidermal growth factor receptors: critical mediators of multiple receptor pathways. Curr Opin Cell Biol 1999; 11:184-9. [PMID: 10209149]
24. Chen H, Liu B, Neufeld AH. Epidermal growth factor receptor in adult retinal neurons of rat, mouse, and human. J Comp Neurol 2007; 500:299-310. [PMID: 17111374]
25. Su J, Muranjan M, Sap J. Receptor protein tyrosine phosphatase alpha activates Src-family kinases and controls integrinmediated responses in fibroblasts. Curr Biol 1999; 9:505-11. [PMID: 10339427]
26. Lin J, Wu H, Tarr PT, Zhang CY, Wu Z, Boss O, Michael LF, Puigserver P, Isotani E, Olson EN, Lowell BB, Bassel-Duby R, Spiegelman BM. Transcriptional co-activator PGC-1 alpha drives the formation of slow-twitch muscle fibres. Nature 2002; 418:797-801. [PMID: 12181572]
27. Arany Z, He H, Lin J, Hoyer K, Handschin C, Toka O, Ahmad F, Matsui T, Chin S, Wu PH, Rybkin II, Shelton JM, Manieri M, Cinti S, Schoen FJ, Bassel-Duby R, Rosenzweig A, Ingwall JS, Spiegelman BM. Transcriptional coactivator PGC-1 alpha controls the energy state and contractile function of cardiac muscle. Cell Metab 2005; 1:259-71. [PMID: 16054070]
28. Scarpulla RC. Nuclear activators and coactivators in mammalian mitochondrial biogenesis. Biochim Biophys Acta 2002; 1576:1-14. [PMID: 12031478]
29. Kawakami Y, Tsuda M, Takahashi S, Taniguchi N, Esteban CR, Zemmyo M, Furumatsu T, Lotz M, Belmonte JC, Asahara H. Transcriptional coactivator PGC-1alpha regulates chondrogenesis via association with Sox9. Proc Natl Acad Sci USA 2005; 102:2414-9. [PMID: 15699338]
30. Seko Y, Azuma N, Takahashi Y, Makino H, Morito T, Muneta T, Matsumoto K, Saito H, Sekiya I, Umezawa A. Human sclera maintains common characteristics with cartilage throughout evolution. PLoS ONE 2008; 3:e3709. [PMID: 19002264]
31. Tsai CL, Wu PC, Fini ME, Shi S. Identification of multipotent stem/progenitor cells in murine sclera. Invest Ophthalmol Vis Sci 2011; 52:5481-7. [PMID: 21788434]