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Volumn 4, Issue 1, 2012, Pages 113-122

Differential responses of nirK- and nirS-carrying bacteria to denitrifying conditions in the anoxic rice field soil

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); HERBASPIRILLUM;

EID: 84863032388     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/j.1758-2229.2011.00311.x     Document Type: Article
Times cited : (66)

References (52)
  • 1
    • 44249099701 scopus 로고    scopus 로고
    • Functional diversity and electron donor dependence of microbial populations capable of U(VI) reduction in radionuclide-contaminated subsurface sediments
    • Akob, D.M., Mills, H.J., Gihring, T.M., Kerkhof, L., Stucki, J.W., Anastacio, A.S., etal. (2008) Functional diversity and electron donor dependence of microbial populations capable of U(VI) reduction in radionuclide-contaminated subsurface sediments. Appl Environ Microb 74: 3159-3170.
    • (2008) Appl Environ Microb , vol.74 , pp. 3159-3170
    • Akob, D.M.1    Mills, H.J.2    Gihring, T.M.3    Kerkhof, L.4    Stucki, J.W.5    Anastacio, A.S.6
  • 2
    • 0036840895 scopus 로고    scopus 로고
    • 2O release and on the community structure of ammonia oxidizers and denitrifiers
    • 2O release and on the community structure of ammonia oxidizers and denitrifiers. Appl Environ Microb 68: 5685-5692.
    • (2002) Appl Environ Microb , vol.68 , pp. 5685-5692
    • Avrahami, S.1    Conrad, R.2    Braker, G.3
  • 3
    • 0031687820 scopus 로고    scopus 로고
    • Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples
    • Braker, G., Fesefeldt, A., and Witzel, K.P. (1998) Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples. Appl Environ Microb 64: 3769-3775.
    • (1998) Appl Environ Microb , vol.64 , pp. 3769-3775
    • Braker, G.1    Fesefeldt, A.2    Witzel, K.P.3
  • 4
    • 0034016758 scopus 로고    scopus 로고
    • Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in Pacific northwest marine sediment communities
    • Braker, G., Zhou, J.Z., Wu, L.Y., Devol, A.H., and Tiedje, J.M. (2000) Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in Pacific northwest marine sediment communities. Appl Environ Microb 66: 2096-2104.
    • (2000) Appl Environ Microb , vol.66 , pp. 2096-2104
    • Braker, G.1    Zhou, J.Z.2    Wu, L.Y.3    Devol, A.H.4    Tiedje, J.M.5
  • 5
    • 0035319656 scopus 로고    scopus 로고
    • Community structure of denitrifiers, Bacteria, and Archaea along redox gradients in pacific northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes
    • Braker, G., Ayala-del-Rio, H.L., Devol, A.H., Fesefeldt, A., and Tiedje, J.M. (2001) Community structure of denitrifiers, Bacteria, and Archaea along redox gradients in pacific northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes. Appl Environ Microb 67: 1893-1901.
    • (2001) Appl Environ Microb , vol.67 , pp. 1893-1901
    • Braker, G.1    Ayala-del-Rio, H.L.2    Devol, A.H.3    Fesefeldt, A.4    Tiedje, J.M.5
  • 6
    • 35948950775 scopus 로고    scopus 로고
    • Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil
    • Bremer, C., Braker, G., Matthies, D., Reuter, A., Engels, C., and Conrad, R. (2007) Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil. Appl Environ Microb 73: 6876-6884.
    • (2007) Appl Environ Microb , vol.73 , pp. 6876-6884
    • Bremer, C.1    Braker, G.2    Matthies, D.3    Reuter, A.4    Engels, C.5    Conrad, R.6
  • 8
    • 78149470564 scopus 로고    scopus 로고
    • Impact of long-term fertilization on the composition of denitrifier communities based on nitrite reductase analyses in a paddy soil
    • Chen, Z., Luo, X., Hu, R., Wu, M., Wu, J., and Wei, W. (2010) Impact of long-term fertilization on the composition of denitrifier communities based on nitrite reductase analyses in a paddy soil. Microbial Ecol 60: 850-861.
    • (2010) Microbial Ecol , vol.60 , pp. 850-861
    • Chen, Z.1    Luo, X.2    Hu, R.3    Wu, M.4    Wu, J.5    Wei, W.6
  • 9
    • 0033741146 scopus 로고    scopus 로고
    • 16S rDNA analysis for characterization of denitrifying bacteria isolated from three agricultural soils
    • Cheneby, D., Philippot, L., Hartmann, A., Henault, C., and Germon, J.C. (2000) 16S rDNA analysis for characterization of denitrifying bacteria isolated from three agricultural soils. Fems Microbiol Ecol 34: 121-128.
    • (2000) Fems Microbiol Ecol , vol.34 , pp. 121-128
    • Cheneby, D.1    Philippot, L.2    Hartmann, A.3    Henault, C.4    Germon, J.C.5
  • 10
    • 0026120939 scopus 로고
    • Direct measurement of ammonia and denitrification fluxes from urea applied to rice
    • Dedatta, S.K., Buresh, R.J., Samson, M.I., Obcemea, W.N., and Real, J.G. (1991) Direct measurement of ammonia and denitrification fluxes from urea applied to rice. Soil Sci Soc Am J 55: 543-548.
    • (1991) Soil Sci Soc Am J , vol.55 , pp. 543-548
    • Dedatta, S.K.1    Buresh, R.J.2    Samson, M.I.3    Obcemea, W.N.4    Real, J.G.5
  • 11
    • 68549140162 scopus 로고    scopus 로고
    • Novel denitrifying bacterium Ochrobactrum anthropi YD50.2 tolerates high levels of reactive nitrogen oxides
    • Doi, Y., Takaya, N., and Takizawa, N. (2009) Novel denitrifying bacterium Ochrobactrum anthropi YD50.2 tolerates high levels of reactive nitrogen oxides. Appl Environ Microb 75: 5186-5194.
    • (2009) Appl Environ Microb , vol.75 , pp. 5186-5194
    • Doi, Y.1    Takaya, N.2    Takizawa, N.3
  • 12
    • 0001517163 scopus 로고
    • Emission of nitrogen oxides (NOx) from a flooded soil fertilized with urea: relation to other nitrogen loss processes
    • Galbally, I.E., Freney, J.R., Muirhead, W.A., Simpson, J.R., Trevitt, A.C.F., and Chalk, P.M. (1987) Emission of nitrogen oxides (NOx) from a flooded soil fertilized with urea: relation to other nitrogen loss processes. J Atmos Chem 5: 343-365.
    • (1987) J Atmos Chem , vol.5 , pp. 343-365
    • Galbally, I.E.1    Freney, J.R.2    Muirhead, W.A.3    Simpson, J.R.4    Trevitt, A.C.F.5    Chalk, P.M.6
  • 13
    • 0032417974 scopus 로고    scopus 로고
    • Environmental hazards of nitrogen loading in wetland rice fields
    • Ghosh, B.C., and Bhat, R. (1998) Environmental hazards of nitrogen loading in wetland rice fields. Environ Pollut 102: 123-126.
    • (1998) Environ Pollut , vol.102 , pp. 123-126
    • Ghosh, B.C.1    Bhat, R.2
  • 14
    • 33747363465 scopus 로고    scopus 로고
    • Metabolic profiles and genetic diversity of denitrifying communities in activated sludge after addition of methanol or ethanol
    • Hallin, S., Throbäck, I.N., Dicksved, J., and Pell, M. (2006) Metabolic profiles and genetic diversity of denitrifying communities in activated sludge after addition of methanol or ethanol. Appl Environ Microb 72: 5445-5452.
    • (2006) Appl Environ Microb , vol.72 , pp. 5445-5452
    • Hallin, S.1    Throbäck, I.N.2    Dicksved, J.3    Pell, M.4
  • 15
    • 67349287510 scopus 로고    scopus 로고
    • Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment
    • Hallin, S., Jones, C.M., Schloter, M., and Philippot, L. (2009) Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment. ISME J 3: 597-605.
    • (2009) ISME J , vol.3 , pp. 597-605
    • Hallin, S.1    Jones, C.M.2    Schloter, M.3    Philippot, L.4
  • 16
    • 13844266734 scopus 로고    scopus 로고
    • Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR (vol 59, pg 327, 2004)
    • Henry, S., Baudoin, E., Lopez-Gutierrez, J.C., Martin-Laurent, F., Brauman, A., and Philippot, L. (2005) Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR (vol 59, pg 327, 2004). J Microbiol Meth 61: 289-290.
    • (2005) J Microbiol Meth , vol.61 , pp. 289-290
    • Henry, S.1    Baudoin, E.2    Lopez-Gutierrez, J.C.3    Martin-Laurent, F.4    Brauman, A.5    Philippot, L.6
  • 17
    • 52949102510 scopus 로고    scopus 로고
    • Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates
    • Henry, S., Texier, S., Hallet, S., Bru, D., Dambreville, C., Cheneby, D., etal. (2008) Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates. Environ Microbiol 10: 3082-3092.
    • (2008) Environ Microbiol , vol.10 , pp. 3082-3092
    • Henry, S.1    Texier, S.2    Hallet, S.3    Bru, D.4    Dambreville, C.5    Cheneby, D.6
  • 18
    • 33749411590 scopus 로고    scopus 로고
    • The incidence of nirS and nirK and their genetic heterogeneity in cultivated denitrifiers
    • Heylen, K., Gevers, D., Vanparys, B., Wittebolle, L., Geets, J., Boon, N., and De Vos, P. (2006) The incidence of nirS and nirK and their genetic heterogeneity in cultivated denitrifiers. Environ Microbiol 8: 2012-2021.
    • (2006) Environ Microbiol , vol.8 , pp. 2012-2021
    • Heylen, K.1    Gevers, D.2    Vanparys, B.3    Wittebolle, L.4    Geets, J.5    Boon, N.6    De Vos, P.7
  • 19
    • 70449510744 scopus 로고    scopus 로고
    • Microbial populations responsive to denitrification-inducing conditions in rice paddy soil, as revealed by comparative 16S rRNA gene analysis
    • Ishii, S., Yamamoto, M., Kikuchi, M., Oshima, K., Hattori, M., Otsuka, S., and Senoo, K. (2009) Microbial populations responsive to denitrification-inducing conditions in rice paddy soil, as revealed by comparative 16S rRNA gene analysis. Appl Environ Microb 75: 7070-7078.
    • (2009) Appl Environ Microb , vol.75 , pp. 7070-7078
    • Ishii, S.1    Yamamoto, M.2    Kikuchi, M.3    Oshima, K.4    Hattori, M.5    Otsuka, S.6    Senoo, K.7
  • 20
    • 79251641179 scopus 로고    scopus 로고
    • Isolation of oligotrophic denitrifiers carrying previously uncharacterized functional gene sequences
    • Ishii, S., Ashida, N., Otsuka, S., and Senoo, K. (2011) Isolation of oligotrophic denitrifiers carrying previously uncharacterized functional gene sequences. Appl Environ Microb 77: 338-342.
    • (2011) Appl Environ Microb , vol.77 , pp. 338-342
    • Ishii, S.1    Ashida, N.2    Otsuka, S.3    Senoo, K.4
  • 21
    • 0031277811 scopus 로고    scopus 로고
    • Diversity of oxygen and N-oxide regulation of nitrite reductases in denitrifying bacteria
    • Ka, J.O., Urbance, J., Ye, R.W., Ahn, T.Y., and Tiedje, J.M. (1997) Diversity of oxygen and N-oxide regulation of nitrite reductases in denitrifying bacteria. Fems Microbiol Lett 156: 55-60.
    • (1997) Fems Microbiol Lett , vol.156 , pp. 55-60
    • Ka, J.O.1    Urbance, J.2    Ye, R.W.3    Ahn, T.Y.4    Tiedje, J.M.5
  • 23
  • 24
    • 0028936489 scopus 로고
    • Criteria and methodology for identifying respiratory denitrifiers
    • Mahne, I., and Tiedje, J.M. (1995) Criteria and methodology for identifying respiratory denitrifiers. Appl Environ Microb 61: 1110-1115.
    • (1995) Appl Environ Microb , vol.61 , pp. 1110-1115
    • Mahne, I.1    Tiedje, J.M.2
  • 25
    • 0344026320 scopus 로고    scopus 로고
    • Population dynamics of denitrifying bacteria in a model biocommunity
    • Martienssen, M., and Schops, R. (1999) Population dynamics of denitrifying bacteria in a model biocommunity. Water Res 33: 639-646.
    • (1999) Water Res , vol.33 , pp. 639-646
    • Martienssen, M.1    Schops, R.2
  • 26
    • 0033803777 scopus 로고    scopus 로고
    • Symbiobacterium thermophilum gen. nov., sp nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth
    • Ohno, M., Shiratori, H., Park, M.J., Saitoh, Y., Kumon, Y., Yamashita, N., etal. (2000) Symbiobacterium thermophilum gen. nov., sp nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth. Int J Syst Evol Micr 50: 1829-1832.
    • (2000) Int J Syst Evol Micr , vol.50 , pp. 1829-1832
    • Ohno, M.1    Shiratori, H.2    Park, M.J.3    Saitoh, Y.4    Kumon, Y.5    Yamashita, N.6
  • 27
    • 33748714124 scopus 로고    scopus 로고
    • Identification of acetate- or methanol-assimilating bacteria under nitrate-reducing conditions by stable-isotope probing
    • Osaka, T., Yoshie, S., Tsuneda, S., Hirata, A., Iwami, N., and Inamori, Y. (2006) Identification of acetate- or methanol-assimilating bacteria under nitrate-reducing conditions by stable-isotope probing. Microbial Ecol 52: 253-266.
    • (2006) Microbial Ecol , vol.52 , pp. 253-266
    • Osaka, T.1    Yoshie, S.2    Tsuneda, S.3    Hirata, A.4    Iwami, N.5    Inamori, Y.6
  • 28
    • 8844273388 scopus 로고    scopus 로고
    • Comparison of aerobic denitrifying activity among three cultural species with various carbon sources
    • Otani, Y., Hasegawa, K., and Hanaki, K. (2004) Comparison of aerobic denitrifying activity among three cultural species with various carbon sources. Water Sci Technol 50: 15-22.
    • (2004) Water Sci Technol , vol.50 , pp. 15-22
    • Otani, Y.1    Hasegawa, K.2    Hanaki, K.3
  • 29
    • 43049141492 scopus 로고    scopus 로고
    • Dynamics of the methanogenic archaeal community during plant residue decomposition in an anoxic rice field soil
    • Peng, J., Lü, Z., Rui, J., and Lu, Y. (2008) Dynamics of the methanogenic archaeal community during plant residue decomposition in an anoxic rice field soil. Appl Environ Microb 74: 2894-2901.
    • (2008) Appl Environ Microb , vol.74 , pp. 2894-2901
    • Peng, J.1    Lü, Z.2    Rui, J.3    Lu, Y.4
  • 30
    • 0036203309 scopus 로고    scopus 로고
    • Diversity of nitrite reductase (nirK and nirS) gene fragments in forested upland and wetland soils
    • Prieme, A., Braker, G., and Tiedje, J.M. (2002) Diversity of nitrite reductase (nirK and nirS) gene fragments in forested upland and wetland soils. Appl Environ Microb 68: 1893-1900.
    • (2002) Appl Environ Microb , vol.68 , pp. 1893-1900
    • Prieme, A.1    Braker, G.2    Tiedje, J.M.3
  • 31
    • 44849128159 scopus 로고    scopus 로고
    • Applying stable isotope probing of phospholipid fatty acids and rRNA in a Chinese rice field to study activity and composition of the methanotrophic bacterial communities in situ
    • Qiu, Q.F., Noll, M., Abraham, W.R., Lu, Y.H., and Conrad, R. (2008) Applying stable isotope probing of phospholipid fatty acids and rRNA in a Chinese rice field to study activity and composition of the methanotrophic bacterial communities in situ. ISME J 2: 602-614.
    • (2008) ISME J , vol.2 , pp. 602-614
    • Qiu, Q.F.1    Noll, M.2    Abraham, W.R.3    Lu, Y.H.4    Conrad, R.5
  • 32
    • 19044398153 scopus 로고    scopus 로고
    • Characterization of Symbiobacterium toebii, an obligate commensal thermophile isolated from compost
    • Rhee, S.-K., Jeon, C., Bae, J.-W., Kim, K., Song, J., Kim, J.-J., etal. (2002) Characterization of Symbiobacterium toebii, an obligate commensal thermophile isolated from compost. Extremophiles 6: 57-64.
    • (2002) Extremophiles , vol.6 , pp. 57-64
    • Rhee, S.-K.1    Jeon, C.2    Bae, J.-W.3    Kim, K.4    Song, J.5    Kim, J.-J.6
  • 33
    • 0034665720 scopus 로고    scopus 로고
    • Greenhouse gases in intensive agriculture: contributions of individual gases to the radiative forcing of the atmosphere
    • Robertson, G., Paul, E., and Harwood, R. (2000) Greenhouse gases in intensive agriculture: contributions of individual gases to the radiative forcing of the atmosphere. Science 289: 1922-1925.
    • (2000) Science , vol.289 , pp. 1922-1925
    • Robertson, G.1    Paul, E.2    Harwood, R.3
  • 34
    • 0025919199 scopus 로고
    • Sources of nitrous oxide production following wetting of dry soil
    • Rudaz, A.O., Davidson, E.A., and Firestone, M.K. (1991) Sources of nitrous oxide production following wetting of dry soil. Fems Microbiol Ecol 85: 117-124.
    • (1991) Fems Microbiol Ecol , vol.85 , pp. 117-124
    • Rudaz, A.O.1    Davidson, E.A.2    Firestone, M.K.3
  • 35
    • 68949145167 scopus 로고    scopus 로고
    • Identification of novel Betaproteobacteria in a succinate-assimilating population in denitrifying rice paddy soil by using stable isotope probing
    • Saito, T., Ishii, S., Otsuka, S., Nishiyama, M., and Senoo, K. (2008) Identification of novel Betaproteobacteria in a succinate-assimilating population in denitrifying rice paddy soil by using stable isotope probing. Microbes Environ 23: 192-200.
    • (2008) Microbes Environ , vol.23 , pp. 192-200
    • Saito, T.1    Ishii, S.2    Otsuka, S.3    Nishiyama, M.4    Senoo, K.5
  • 36
    • 33644949502 scopus 로고    scopus 로고
    • Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer
    • Santoro, A.E., Boehm, A.B., and Francis, C.A. (2006) Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer. Appl Environ Microb 72: 2102-2109.
    • (2006) Appl Environ Microb , vol.72 , pp. 2102-2109
    • Santoro, A.E.1    Boehm, A.B.2    Francis, C.A.3
  • 37
    • 7444222279 scopus 로고    scopus 로고
    • Identification of rice root associated nitrate, sulfate and ferric iron reducing bacteria during root decomposition
    • Scheid, D., Stubner, S., and Conrad, R. (2004) Identification of rice root associated nitrate, sulfate and ferric iron reducing bacteria during root decomposition. Fems Microbiol Ecol 50: 101-110.
    • (2004) Fems Microbiol Ecol , vol.50 , pp. 101-110
    • Scheid, D.1    Stubner, S.2    Conrad, R.3
  • 38
    • 43049177140 scopus 로고    scopus 로고
    • The denitrifying prokaryotes
    • Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K.-H., and Stackebrandt, E. (eds). New York, NY, USA: Springer
    • Shapleigh, J. (2006) The denitrifying prokaryotes. In The Prokaryotes. Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K.-H., and Stackebrandt, E. (eds). New York, NY, USA: Springer, pp. 769-792.
    • (2006) The Prokaryotes , pp. 769-792
    • Shapleigh, J.1
  • 39
    • 17444413782 scopus 로고    scopus 로고
    • Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes
    • Sharma, S., Aneja, M.K., Mayer, J., Munch, J.C., and Schloter, M. (2005) Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes. Appl Environ Microb 71: 2001-2007.
    • (2005) Appl Environ Microb , vol.71 , pp. 2001-2007
    • Sharma, S.1    Aneja, M.K.2    Mayer, J.3    Munch, J.C.4    Schloter, M.5
  • 40
    • 52649158799 scopus 로고    scopus 로고
    • Genetic and functional variation in denitrifier populations along a short-term restoration chronosequence
    • Smith, J.M., and Ogram, A. (2008) Genetic and functional variation in denitrifier populations along a short-term restoration chronosequence. Appl Environ Microb 74: 5615-5620.
    • (2008) Appl Environ Microb , vol.74 , pp. 5615-5620
    • Smith, J.M.1    Ogram, A.2
  • 41
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M., and Kumar, S. (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 42
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 43
    • 4344685944 scopus 로고    scopus 로고
    • Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE
    • Throbäck, I.N., Enwall, K., Jarvis, A., and Hallin, S. (2004) Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE. Fems Microbiol Ecol 49: 401-417.
    • (2004) Fems Microbiol Ecol , vol.49 , pp. 401-417
    • Throbäck, I.N.1    Enwall, K.2    Jarvis, A.3    Hallin, S.4
  • 44
    • 4644315656 scopus 로고    scopus 로고
    • Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism
    • Ueda, K., Yamashita, A., Ishikawa, J., Shimada, M., Watsuji, T., Morimura, K., etal. (2004) Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism. Nucleic Acids Res 32: 4937-4944.
    • (2004) Nucleic Acids Res , vol.32 , pp. 4937-4944
    • Ueda, K.1    Yamashita, A.2    Ishikawa, J.3    Shimada, M.4    Watsuji, T.5    Morimura, K.6
  • 45
    • 63849207489 scopus 로고    scopus 로고
    • Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils
    • Ward, N.L., Challacombe, J.F., Janssen, P.H., Henrissat, B., Coutinho, P.M., Wu, M., etal. (2009) Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Appl Environ Microb 75: 2046-2056.
    • (2009) Appl Environ Microb , vol.75 , pp. 2046-2056
    • Ward, N.L.1    Challacombe, J.F.2    Janssen, P.H.3    Henrissat, B.4    Coutinho, P.M.5    Wu, M.6
  • 46
    • 2142761510 scopus 로고    scopus 로고
    • Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments
    • Wolsing, M., and Prieme, A. (2004) Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments. Fems Microbiol Ecol 48: 261-271.
    • (2004) Fems Microbiol Ecol , vol.48 , pp. 261-271
    • Wolsing, M.1    Prieme, A.2
  • 48
    • 70349127272 scopus 로고    scopus 로고
    • Temporal shifts in diversity and quantity of nirS and nirK in a rice paddy field soil
    • Yoshida, M., Ishii, S., Otsuka, S., and Senoo, K. (2009) Temporal shifts in diversity and quantity of nirS and nirK in a rice paddy field soil. Soil Biol and Biochem 41: 2044-2051.
    • (2009) Soil Biol and Biochem , vol.41 , pp. 2044-2051
    • Yoshida, M.1    Ishii, S.2    Otsuka, S.3    Senoo, K.4
  • 49
    • 77349108829 scopus 로고    scopus 로고
    • nirK-harboring denitrifiers are more responsive to denitrification-inducing conditions in rice paddy soil than nirS-harboring Bacteria
    • Yoshida, M., Ishii, S., Otsuka, S., and Senoo, K. (2010) nirK-harboring denitrifiers are more responsive to denitrification-inducing conditions in rice paddy soil than nirS-harboring Bacteria. Microbes Environ 25: 45-48.
    • (2010) Microbes Environ , vol.25 , pp. 45-48
    • Yoshida, M.1    Ishii, S.2    Otsuka, S.3    Senoo, K.4
  • 50
    • 78649715235 scopus 로고    scopus 로고
    • Response of methanogenic archaeal community to nitrate addition in rice field soil
    • Yuan, Q., and Lu, Y.H. (2009) Response of methanogenic archaeal community to nitrate addition in rice field soil. Env Microbiol Rep 1: 362-369.
    • (2009) Env Microbiol Rep , vol.1 , pp. 362-369
    • Yuan, Q.1    Lu, Y.H.2
  • 51
    • 0036010867 scopus 로고    scopus 로고
    • The Asian nitrogen cycle case study
    • Zheng, X., Fu, C., Xu, X., Yan, X., Huang, Y., Han, S., etal. (2002) The Asian nitrogen cycle case study. Ambio 31: 79-87.
    • (2002) Ambio , vol.31 , pp. 79-87
    • Zheng, X.1    Fu, C.2    Xu, X.3    Yan, X.4    Huang, Y.5    Han, S.6
  • 52
    • 0031456471 scopus 로고    scopus 로고
    • Cell biology and molecular basis of denitrification
    • Zumft, W. (1997) Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev 61: 533-616.
    • (1997) Microbiol Mol Biol Rev , vol.61 , pp. 533-616
    • Zumft, W.1


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