-
3
-
-
0141958956
-
Gene expression profiles in the brain predict behavior in individual honey bees
-
DOI 10.1126/science.1086807
-
Whitfield CW, Cziko AM, Robinson GE (2003) Gene expression profiles in the brain predict behavior in individual honey bees. Science 302:296-299. (Pubitemid 37248762)
-
(2003)
Science
, vol.302
, Issue.5643
, pp. 296-299
-
-
Whitfield, C.W.1
Cziko, A.-M.2
Robinson, G.E.3
-
4
-
-
77950529946
-
Motif Enrichment Analysis: A unified framework and an evaluation on ChIP data
-
McLeay RC, Bailey TL (2010) Motif Enrichment Analysis: A unified framework and an evaluation on ChIP data. BMC Bioinformatics 11:165.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 165
-
-
McLeay, R.C.1
Bailey, T.L.2
-
5
-
-
41449086977
-
Systematic identification of mammalian regulatory motifs' target genes and functions
-
DOI 10.1038/nmeth.1188, PII NMETH.1188
-
Warner JB, et al. (2008) Systematic identification of mammalian regulatory motifs'target genes and functions. Nat Methods 5:347-353. (Pubitemid 351459368)
-
(2008)
Nature Methods
, vol.5
, Issue.4
, pp. 347-353
-
-
Warner, J.B.1
Philippakis, A.A.2
Jaeger, S.A.3
He, F.S.4
Lin, J.5
Bulyk, M.L.6
-
6
-
-
40449124692
-
Systematic functional characterization of cis-regulatory motifs in human core promoters
-
DOI 10.1101/gr.6828808
-
Sinha S, Adler AS, Field Y, Chang HY, Segal E (2008) Systematic functional characterization of cis-regulatory motifs in human core promoters. Genome Res 18:477-488. (Pubitemid 351347091)
-
(2008)
Genome Research
, vol.18
, Issue.3
, pp. 477-488
-
-
Sinha, S.1
Adler, A.S.2
Field, Y.3
Chang, H.Y.4
Segal, E.5
-
7
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
DOI 10.1073/pnas.0506580102
-
Subramanian A, et al. (2005) Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 102:15545-15550. (Pubitemid 41528093)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.43
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
8
-
-
41349115501
-
Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation
-
Smith DD, et al. (2008) Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation. BMC Bioinformatics 9:63.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 63
-
-
Smith, D.D.1
-
9
-
-
1542357674
-
Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
-
DOI 10.1073/pnas.0308661100
-
Tanay A, Sharan R, Kupiec M, Shamir R (2004) Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data. Proc Natl Acad Sci USA 101:2981-2986. (Pubitemid 38327722)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.9
, pp. 2981-2986
-
-
Tanay, A.1
Sharan, R.2
Kupiec, M.3
Shamir, R.4
-
10
-
-
33746067911
-
Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks
-
Reiss DJ, Baliga NS, Bonneau R (2006) Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks. BMC Bioinformatics 7:280.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 280
-
-
Reiss, D.J.1
Baliga, N.S.2
Bonneau, R.3
-
11
-
-
63249135662
-
Allegro: Analyzing expression and sequence in concert to discover regulatory programs
-
Halperin Y, Linhart C, Ulitsky I, Shamir R (2009) Allegro: Analyzing expression and sequence in concert to discover regulatory programs. Nucleic Acids Res 37:1566-1579.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1566-1579
-
-
Halperin, Y.1
Linhart, C.2
Ulitsky, I.3
Shamir, R.4
-
12
-
-
75849134576
-
Detailing regulatory networks through large scale data integration
-
Huttenhower C, et al. (2009) Detailing regulatory networks through large scale data integration. Bioinformatics 25:3267-3274.
-
(2009)
Bioinformatics
, vol.25
, pp. 3267-3274
-
-
Huttenhower, C.1
-
13
-
-
0033911258
-
Critical periods of vulnerability for the developing nervous system: Evidence from humans and animal models
-
Rice D, Barone S, Jr. (2000) Critical periods of vulnerability for the developing nervous system: Evidence from humans and animal models. Environ Health Perspect 108(Suppl 3):511-533. (Pubitemid 30466179)
-
(2000)
Environmental Health Perspectives
, vol.108
, Issue.SUPPL. 3
, pp. 511-533
-
-
Rice, D.1
Barone Jr., S.2
-
15
-
-
0036927543
-
Genomics and integrative analyses of division of labor in honeybee colonies
-
Robinson GE (2002) Genomics and integrative analyses of division of labor in honeybee colonies. Am Nat 160(Suppl 6):S160-S172.
-
(2002)
Am Nat
, vol.160
, Issue.SUPPL. 6
-
-
Robinson, G.E.1
-
16
-
-
33750834169
-
Genomic dissection of behavioral maturation in the honey bee
-
DOI 10.1073/pnas.0606909103
-
Whitfield CW, et al. (2006) Genomic dissection of behavioral maturation in the honey bee. Proc Natl Acad Sci USA 103:16068-16075. (Pubitemid 44715152)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.44
, pp. 16068-16075
-
-
Whitfield, C.W.1
Ben-Shahar, Y.2
Brillet, C.3
Leoncini, I.4
Crauser, D.5
LeConte, Y.6
Rodriguez-Zas, S.7
Robinson, G.E.8
-
17
-
-
79952115883
-
Nutritional regulation of division of labor in honey bees: Toward a systems biology perspective
-
Ament SA, Wang Y, Robinson GE (2010) Nutritional regulation of division of labor in honey bees: Toward a systems biology perspective. Wiley Interdiscip Rev Syst Biol Med 2:566-576.
-
(2010)
Wiley Interdiscip Rev Syst Biol Med
, vol.2
, pp. 566-576
-
-
Ament, S.A.1
Wang, Y.2
Robinson, G.E.3
-
18
-
-
33947281456
-
The gene vitellogenin has multiple coordinating effects on social organization
-
Nelson CM, Ihle KE, Fondrk MK, Page RE, Amdam GV (2007) The gene vitellogenin has multiple coordinating effects on social organization. PLoS Biol 5:e62.
-
(2007)
PLoS Biol
, vol.5
-
-
Nelson, C.M.1
Ihle, K.E.2
Fondrk, M.K.3
Page, R.E.4
Amdam, G.V.5
-
19
-
-
33750797968
-
Genome scan for cis-regulatory DNA motifs associated with social behavior in honey bees
-
DOI 10.1073/pnas.0607448103
-
Sinha S, Ling X, Whitfield CW, Zhai C, Robinson GE (2006) Genome scan for cisregulatory DNA motifs associated with social behavior in honey bees. Proc Natl Acad Sci USA 103:16352-16357. (Pubitemid 44715200)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.44
, pp. 16352-16357
-
-
Sinha, S.1
Ling, X.2
Whitfield, C.W.3
Zhai, C.4
Robinson, G.E.5
-
20
-
-
65249138275
-
Regulation of brain gene expression in honey bees by brood pheromone
-
Alaux C, et al. (2009) Regulation of brain gene expression in honey bees by brood pheromone. Genes Brain Behav 8:309-319.
-
(2009)
Genes Brain Behav
, vol.8
, pp. 309-319
-
-
Alaux, C.1
-
21
-
-
0345492333
-
Pheromone-mediated gene expression in the honey bee brain
-
Grozinger CM, Sharabash NM, Whitfield CW, Robinson GE (2003) Pheromone-mediated gene expression in the honey bee brain. Proc Natl Acad Sci USA 100(Suppl 2):14519-14525. (Pubitemid 37499275)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.24
, pp. 14519-14525
-
-
Grozinger, C.M.1
Sharabash, N.M.2
Whitfield, C.W.3
Robinson, G.E.4
-
22
-
-
81055126281
-
Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states
-
Chandrasekaran S, et al. (2011) Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states. Proc Natl Acad Sci USA 108:18020-18025.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 18020-18025
-
-
Chandrasekaran, S.1
-
24
-
-
6944244084
-
A module map showing conditional activity of expression modules in cancer
-
DOI 10.1038/ng1434
-
Segal E, Friedman N, Koller D, Regev A (2004) A module map showing conditional activity of expression modules in cancer. Nat Genet 36:1090-1098. (Pubitemid 41184471)
-
(2004)
Nature Genetics
, vol.36
, Issue.10
, pp. 1090-1098
-
-
Segal, E.1
Friedman, N.2
Koller, D.3
Regev, A.4
-
25
-
-
0035786491
-
Genotype and colony environment affect honeybee (Apis mellifera L.) development and foraging behavior
-
DOI 10.1007/s002650100408
-
Pankiw T, Page RE (2001) Genotype and colony environment affect honeybee (Apis mellifera L.) development and foraging behavior. Behav Ecol Sociobiol 51:87-94. (Pubitemid 36058953)
-
(2001)
Behavioral Ecology and Sociobiology
, vol.51
, Issue.1
, pp. 87-94
-
-
Pankiw, T.1
Page Jr., R.E.2
-
26
-
-
79957969264
-
Genomics. Behavior and the dynamic genome
-
Bell AM, Robinson GE (2011) Genomics. Behavior and the dynamic genome. Science 332:1161-1162.
-
(2011)
Science
, vol.332
, pp. 1161-1162
-
-
Bell, A.M.1
Robinson, G.E.2
-
27
-
-
0034060099
-
Genetic variation in worker temporal polyethism and colony defensiveness in the honey bee, Apis mellifera
-
Giray T, et al. (2000) Genetic variation in worker temporal polyethism and colony defensiveness in the honey bee, Apis mellifera. Behav Ecol 11:44-55. (Pubitemid 30146975)
-
(2000)
Behavioral Ecology
, vol.11
, Issue.1
, pp. 44-55
-
-
Giray, T.1
Guzman-Novoa, E.2
Aron, C.W.3
Zelinsky, B.4
Fahrbach, S.E.5
Robinson, G.E.6
-
28
-
-
33747299885
-
Comparative genomics of Drosophila and human core promoters
-
FitzGerald PC, Sturgill D, Shyakhtenko A, Oliver B, Vinson C (2006) Comparative genomics of Drosophila and human core promoters. Genome Biol 7:R53.
-
(2006)
Genome Biol
, vol.7
-
-
FitzGerald, P.C.1
Sturgill, D.2
Shyakhtenko, A.3
Oliver, B.4
Vinson, C.5
-
29
-
-
70349313621
-
Honey bee aggression supports a link between gene regulation and behavioral evolution
-
Alaux C, et al. (2009) Honey bee aggression supports a link between gene regulation and behavioral evolution. Proc Natl Acad Sci USA 106:15400-15405.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 15400-15405
-
-
Alaux, C.1
-
30
-
-
0027227498
-
Selective neuroanatomical plasticity and division of labour in the honeybee
-
DOI 10.1038/364238a0
-
Withers GS, Fahrbach SE, Robinson GE (1993) Selective neuroanatomical plasticity and division of labour in the honeybee. Nature 364:238-240. (Pubitemid 23257081)
-
(1993)
Nature
, vol.364
, Issue.6434
, pp. 238-240
-
-
Withers, G.S.1
Fahrbach, S.E.2
Robinson, G.E.3
-
31
-
-
0027097556
-
Honeybee colony integration: Worker-worker interactions mediate hormonally regulated plasticity in division of labor
-
Huang ZY, Robinson GE (1992) Honeybee colony integration: Worker-worker interactions mediate hormonally regulated plasticity in division of labor. Proc Natl Acad Sci USA 89:11726-11729.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 11726-11729
-
-
Huang, Z.Y.1
Robinson, G.E.2
-
32
-
-
36549064711
-
Neuroplasticity mediated by altered gene expression
-
DOI 10.1038/sj.npp.1301544, PII 1301544
-
McClung CA, Nestler EJ (2008) Neuroplasticity mediated by altered gene expression. Neuropsychopharmacology 33:3-17. (Pubitemid 350191310)
-
(2008)
Neuropsychopharmacology
, vol.33
, Issue.1
, pp. 3-17
-
-
McClung, C.A.1
Nestler, E.J.2
-
33
-
-
0035966269
-
XBP1 mRNA is induced by ATF6 and spliced by IRE1 in response to ER stress to produce a highly active transcription factor
-
DOI 10.1016/S0092-8674(01)00611-0
-
Yoshida H, Matsui T, Yamamoto A, Okada T, Mori K (2001) XBP1 mRNA is induced by ATF6 and spliced by IRE1 in response to ER stress to produce a highly active transcription factor. Cell 107:881-891. (Pubitemid 34084979)
-
(2001)
Cell
, vol.107
, Issue.7
, pp. 881-891
-
-
Yoshida, H.1
Matsui, T.2
Yamamoto, A.3
Okada, T.4
Mori, K.5
-
34
-
-
77249129746
-
Nuclear factor-kappaB is a critical mediator of stress-impaired neurogenesis and depressive behavior
-
Koo JW, Russo SJ, Ferguson D, Nestler EJ, Duman RS (2010) Nuclear factor-kappaB is a critical mediator of stress-impaired neurogenesis and depressive behavior. Proc Natl Acad Sci USA 107:2669-2674.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 2669-2674
-
-
Koo, J.W.1
Russo, S.J.2
Ferguson, D.3
Nestler, E.J.4
Duman, R.S.5
-
35
-
-
46549088507
-
Juvenile hormone action: A 2007 perspective
-
Riddiford LM (2008) Juvenile hormone action: A 2007 perspective. J Insect Physiol 54:895-901.
-
(2008)
J Insect Physiol
, vol.54
, pp. 895-901
-
-
Riddiford, L.M.1
-
36
-
-
0031930319
-
Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice
-
Larsson NG, et al. (1998) Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice. Nat Genet 18:231-236.
-
(1998)
Nat Genet
, vol.18
, pp. 231-236
-
-
Larsson, N.G.1
-
37
-
-
33646137384
-
A systematic comparison and evaluation of biclustering methods for gene expression data
-
Prelić A, et al. (2006) A systematic comparison and evaluation of biclustering methods for gene expression data. Bioinformatics 22:1122-1129.
-
(2006)
Bioinformatics
, vol.22
, pp. 1122-1129
-
-
Prelić, A.1
-
38
-
-
53549130568
-
Fish and chips: Functional genomics of social plasticity in an African cichlid fish
-
Renn SCP, Aubin-Horth N, Hofmann HA (2008) Fish and chips: Functional genomics of social plasticity in an African cichlid fish. J Exp Biol 211:3041-3056.
-
(2008)
J Exp Biol
, vol.211
, pp. 3041-3056
-
-
Renn, S.C.P.1
Aubin-Horth, N.2
Hofmann, H.A.3
-
39
-
-
84859234586
-
The transcription factor ultraspiracle influences honey bee social behavior and behavior-related gene expression
-
Ament SA, et al. (2012) The transcription factor ultraspiracle influences honey bee social behavior and behavior-related gene expression. PLoS Genet 8:e1002596.
-
(2012)
PLoS Genet
, vol.8
-
-
Ament, S.A.1
-
40
-
-
0031844897
-
Segmentation: Painting stripes from flies to vertebrates
-
Pick L (1998) Segmentation: Painting stripes from flies to vertebrates. Dev Genet 23:1-10.
-
(1998)
Dev Genet
, vol.23
, pp. 1-10
-
-
Pick, L.1
-
41
-
-
0036682376
-
Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer
-
Rhodes DR, Barrette TR, Rubin MA, Ghosh D, Chinnaiyan AM (2002) Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer. Cancer Res 62:4427-4433. (Pubitemid 34827303)
-
(2002)
Cancer Research
, vol.62
, Issue.15
, pp. 4427-4433
-
-
Rhodes, D.R.1
Barrette, T.R.2
Rubin, M.A.3
Ghosh, D.4
Chinnaiyan, A.M.5
-
42
-
-
85171926851
-
-
IGI Global, Hershey, PA
-
Tchagang AB, Pan Y, Famili F, Tewfik AH, Benos PV (2010) Handbook of Research on Computational and Systems Biology: Interdisciplinary Applications (IGI Global, Hershey, PA), pp 148-186.
-
(2010)
Handbook of Research on Computational and Systems Biology: Interdisciplinary Applications
, pp. 148-186
-
-
Tchagang, A.B.1
Pan, Y.2
Famili, F.3
Tewfik, A.H.4
Benos, P.V.5
-
43
-
-
0031877016
-
Combining evidence using p-values: Application to sequence homology searches
-
Bailey TL, Gribskov M (1998) Combining evidence using p-values: Application to sequence homology searches. Bioinformatics 14:48-54. (Pubitemid 28395676)
-
(1998)
Bioinformatics
, vol.14
, Issue.1
, pp. 48-54
-
-
Bailey, T.L.1
Gribskov, M.2
-
44
-
-
34548742517
-
Identification of functional modules using network topology and high-throughput data
-
Ulitsky I, Shamir R (2007) Identification of functional modules using network topology and high-throughput data. BMC Syst Biol 1:8.
-
(2007)
BMC Syst Biol
, vol.1
, pp. 8
-
-
Ulitsky, I.1
Shamir, R.2
-
45
-
-
52149097555
-
Regulatory networks define phenotypic classes of human stem cell lines
-
Müller FJ, et al. (2008) Regulatory networks define phenotypic classes of human stem cell lines. Nature 455:401-405.
-
(2008)
Nature
, vol.455
, pp. 401-405
-
-
Müller, F.J.1
-
46
-
-
20844437991
-
Functional annotation and network reconstruction through cross-platform integration of microarray data
-
DOI 10.1038/nbt1058
-
Zhou XJ, et al. (2005) Functional annotation and network reconstruction through cross-platform integration of microarray data. Nat Biotechnol 23:238-243. (Pubitemid 40255336)
-
(2005)
Nature Biotechnology
, vol.23
, Issue.2
, pp. 238-243
-
-
Zhou, X.J.1
Kao, M.-C.J.2
Huang, H.3
Wong, A.4
Nunez-Iglesias, J.5
Primig, M.6
Aparicio, O.M.7
Finch, C.E.8
Morgan, T.E.9
Wing, H.W.10
-
47
-
-
3042694117
-
Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
-
DOI 10.1073/pnas.0401994101
-
Rhodes DR, et al. (2004) Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression. Proc Natl Acad Sci USA 101:9309-9314. (Pubitemid 38812872)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.25
, pp. 9309-9314
-
-
Rhodes, D.R.1
Yu, J.2
Shanker, K.3
Deshpande, N.4
Varambally, R.5
Ghosh, D.6
Barrette, T.7
Pandey, A.8
Chinnaiyan, A.M.9
-
48
-
-
0842267618
-
Comparing genomic expression patterns across species identifies shared transcriptional profile in aging
-
DOI 10.1038/ng1291
-
McCarroll SA, et al. (2004) Comparing genomic expression patterns across species identifies shared transcriptional profile in aging. Nat Genet 36:197-204. (Pubitemid 38174381)
-
(2004)
Nature Genetics
, vol.36
, Issue.2
, pp. 197-204
-
-
McCarroll, S.A.1
Murphy, C.T.2
Zou, S.3
Pletcher, S.D.4
Chin, C.-S.5
Jan, Y.N.6
Kenyon, C.7
Bargmann, C.I.8
Li, H.9
-
49
-
-
38849106351
-
A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments
-
Hong FX, Breitling R (2008) A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments. Bioinformatics 24:374-382.
-
(2008)
Bioinformatics
, vol.24
, pp. 374-382
-
-
Hong, F.X.1
Breitling, R.2
-
50
-
-
53149135477
-
Key issues in conducting a meta-analysis of gene expression microarray datasets
-
Ramasamy A, Mondry A, Holmes CC, Altman DG (2008) Key issues in conducting a meta-analysis of gene expression microarray datasets. PLoS Med 5:e184.
-
(2008)
PLoS Med
, vol.5
-
-
Ramasamy, A.1
Mondry, A.2
Holmes, C.C.3
Altman, D.G.4
-
51
-
-
80052007879
-
Multiple enhancers ensure precision of gap gene-expression patterns in the Drosophila embryo
-
Perry MW, Boettiger AN, Levine M (2011) Multiple enhancers ensure precision of gap gene-expression patterns in the Drosophila embryo. Proc Natl Acad Sci USA 108:13570-13575.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 13570-13575
-
-
Perry, M.W.1
Boettiger, A.N.2
Levine, M.3
-
52
-
-
77956830473
-
Quantitative analysis of the Drosophila segmentation regulatory network using pattern generating potentials
-
Kazemian M, et al. (2010) Quantitative analysis of the Drosophila segmentation regulatory network using pattern generating potentials. PLoS Biol 8:e1000456.
-
(2010)
PLoS Biol
, vol.8
-
-
Kazemian, M.1
-
53
-
-
33750460281
-
Insights into social insects from the genome of the honeybee Apis mellifera
-
Honeybee Genome Sequencing Consortium
-
Honeybee Genome Sequencing Consortium (2006) Insights into social insects from the genome of the honeybee Apis mellifera. Nature 443:931-949.
-
(2006)
Nature
, vol.443
, pp. 931-949
-
-
-
54
-
-
70350342629
-
Product of n independent uniform random variables
-
Dettmann CP, Georgiou O (2009) Product of n independent uniform random variables. Stat Probab Lett 79:2501-2503.
-
(2009)
Stat Probab Lett
, vol.79
, pp. 2501-2503
-
-
Dettmann, C.P.1
Georgiou, O.2
-
55
-
-
77952214662
-
GREAT improves functional interpretation of cis-regulatory regions
-
McLean CY, et al. (2010) GREAT improves functional interpretation of cis-regulatory regions. Nat Biotechnol 28:495-501.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 495-501
-
-
McLean, C.Y.1
-
56
-
-
52949134519
-
GIMSAN: A Gibbs motif finder with significance analysis
-
Ng P, Keich U (2008) GIMSAN: A Gibbs motif finder with significance analysis. Bioinformatics 24:2256-2257.
-
(2008)
Bioinformatics
, vol.24
, pp. 2256-2257
-
-
Ng, P.1
Keich, U.2
-
57
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc B Stat Methodol 57:289-300.
-
(1995)
J R Stat Soc B Stat Methodol
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
58
-
-
28444493739
-
Combining probability from independent tests: The weighted Z-method is superior to Fisher's approach
-
Whitlock MC (2005) Combining probability from independent tests: The weighted Z-method is superior to Fisher's approach. J Evol Biol 18:1368-1373.
-
(2005)
J Evol Biol
, vol.18
, pp. 1368-1373
-
-
Whitlock, M.C.1
-
59
-
-
0003713709
-
Adjustment during Army Life
-
Princeton Univ Press, Princeton
-
Stouffer SA, Suchman EA, DeVinney LC, Star SA, Williams RM, Jr. (1949) The American Soldier, Vol. 1: Adjustment During Army Life (Princeton Univ Press, Princeton).
-
(1949)
The American Soldier
, vol.1
-
-
Stouffer, S.A.1
Suchman, E.A.2
DeVinney, L.C.3
Star, S.A.4
Williams Jr., R.M.5
-
60
-
-
0025008320
-
A consensus combined P-value test and the family-wide significance of component tests
-
Rice WR (1990) A consensus combined P-value test and the family-wide significance of component tests. Biometrics 46:303-308.
-
(1990)
Biometrics
, vol.46
, pp. 303-308
-
-
Rice, W.R.1
-
62
-
-
1142273091
-
Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: A unified approach
-
DOI 10.1111/j.1467-9868.2004.00439.x
-
Storey JD, Taylor JE, Siegmund D (2004) Strong control, conservative point estimation, and simultaneous conservative consistency of false discovery rates: A unified approach. J R Stat Soc B Stat Methodol 66:187-205. (Pubitemid 38210666)
-
(2004)
Journal of the Royal Statistical Society. Series B: Statistical Methodology
, vol.66
, Issue.1
, pp. 187-205
-
-
Storey, J.D.1
Taylor, J.E.2
Siegmund, D.3
-
64
-
-
36049018312
-
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
-
DOI 10.1038/nature06340, PII NATURE06340
-
Stark A, et al. (2007) Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature 450:219-232. (Pubitemid 350100553)
-
(2007)
Nature
, vol.450
, Issue.7167
, pp. 219-232
-
-
Stark, A.1
Lin, M.F.2
Kheradpour, P.3
Pedersen, J.S.4
Parts, L.5
Carlson, J.W.6
Crosby, M.A.7
Rasmussen, M.D.8
Roy, S.9
Deoras, A.N.10
Ruby, J.G.11
Brennecke, J.12
Hodges, E.13
Hinrichs, A.S.14
Caspi, A.15
Paten, B.16
Park, S.-W.17
Han, M.V.18
Maeder, M.L.19
Polansky, B.J.20
Robson, B.E.21
Aerts, S.22
Van Helden, J.23
Hassan, B.24
Gilbert, D.G.25
Eastman, D.A.26
Rice, M.27
Weir, M.28
Hahn, M.W.29
Park, Y.30
Dewey, C.N.31
Pachter, L.32
Kent, W.J.33
Haussler, D.34
Lai, E.C.35
Bartel, D.P.36
Hannon, G.J.37
Kaufman, T.C.38
Eisen, M.B.39
Clark, A.G.40
Smith, D.41
Celniker, S.E.42
Gelbart, W.M.43
Kellis, M.44
Matthews, B.B.45
Schroeder, A.J.46
Gramates, L.S.47
St, P.S.E.48
Roark, M.49
Wiley Jr., K.L.50
Kulathinal, R.J.51
Zhang, P.52
Myrick, K.V.53
Antone, J.V.54
Yu, C.55
Park, S.56
Wan, K.H.57
more..
|