-
1
-
-
2142639530
-
Genomics. Beyond nature and nurture
-
Robinson GE (2004) Genomics. Beyond nature and nurture. Science 304:397-399.
-
(2004)
Science
, vol.304
, pp. 397-399
-
-
Robinson, G.E.1
-
3
-
-
75149195336
-
The transcriptional network for mesenchymal transformation of brain tumours
-
Carro MS, et al. (2010) The transcriptional network for mesenchymal transformation of brain tumours. Nature 463:318-325.
-
(2010)
Nature
, vol.463
, pp. 318-325
-
-
Carro, M.S.1
-
4
-
-
16844376909
-
Reverse engineering of regulatory networks in human B cells
-
Basso K, et al. (2005) Reverse engineering of regulatory networks in human B cells. Nat Genet 37:382-390.
-
(2005)
Nat Genet
, vol.37
, pp. 382-390
-
-
Basso, K.1
-
5
-
-
37349099750
-
A Predictive Model for Transcriptional Control of Physiology in a Free Living Cell
-
DOI 10.1016/j.cell.2007.10.053, PII S009286740701416X
-
Bonneau R, et al. (2007) A predictive model for transcriptional control of physiology in a free living cell. Cell 131:1354-1365. (Pubitemid 350297417)
-
(2007)
Cell
, vol.131
, Issue.7
, pp. 1354-1365
-
-
Bonneau, R.1
Facciotti, M.T.2
Reiss, D.J.3
Schmid, A.K.4
Pan, M.5
Kaur, A.6
Thorsson, V.7
Shannon, P.8
Johnson, M.H.9
Bare, J.C.10
Longabaugh, W.11
Vuthoori, M.12
Whitehead, K.13
Madar, A.14
Suzuki, L.15
Mori, T.16
Chang, D.-E.17
DiRuggiero, J.18
Johnson, C.H.19
Hood, L.20
Baliga, N.S.21
more..
-
6
-
-
4644326931
-
Genomic analysis of regulatory network dynamics reveals large topological changes
-
DOI 10.1038/nature02782
-
Luscombe NM, et al. (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431:308-312. (Pubitemid 39265665)
-
(2004)
Nature
, vol.431
, Issue.7006
, pp. 308-312
-
-
Luscombe, N.M.1
Babu, M.M.2
Yu, H.3
Snyder, M.4
Teichmann, S.A.5
Gerstein, M.6
-
7
-
-
70349313621
-
Honey bee aggression supports a link between gene regulation and behavioral evolution
-
Alaux C, et al. (2009) Honey bee aggression supports a link between gene regulation and behavioral evolution. Proc Natl Acad Sci USA 106:15400-15405.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 15400-15405
-
-
Alaux, C.1
-
9
-
-
33947305781
-
ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context
-
Margolin AA, et al. (2006) ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. BMC Bioinformatics 7(Suppl 1):S7.
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.SUPPL. 1
-
-
Margolin, A.A.1
-
10
-
-
3242708140
-
Least angle regression
-
DOI 10.1214/009053604000000067
-
Efron B, Hastie T, Johnstone I, Tibshirani R (2004) Least angle regression. Ann Stat 32:407-499. (Pubitemid 41250302)
-
(2004)
Annals of Statistics
, vol.32
, Issue.2
, pp. 407-499
-
-
Efron, B.1
Hastie, T.2
Johnstone, I.3
Tibshirani, R.4
Ishwaran, H.5
Knight, K.6
Loubes, J.-M.7
Massart, P.8
Madigan, D.9
Ridgeway, G.10
Rosset, S.11
Zhu, J.I.12
Stine, R.A.13
Turlach, B.A.14
Weisberg, S.15
Hastie, T.16
Johnstone, I.17
Tibshirani, R.18
-
11
-
-
78650331647
-
Identification of functional elements and regulatory circuits by Drosophila modENCODE
-
modENCODE Consortium
-
Roy S, et al.; modENCODE Consortium (2010) Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science 330:1787-1797.
-
(2010)
Science
, vol.330
, pp. 1787-1797
-
-
Roy, S.1
-
12
-
-
36549064711
-
Neuroplasticity mediated by altered gene expression
-
DOI 10.1038/sj.npp.1301544, PII 1301544
-
McClung CA, Nestler EJ (2008) Neuroplasticity mediated by altered gene expression. Neuropsychopharmacology 33:3-17. (Pubitemid 350191310)
-
(2008)
Neuropsychopharmacology
, vol.33
, Issue.1
, pp. 3-17
-
-
McClung, C.A.1
Nestler, E.J.2
-
13
-
-
46549088507
-
Juvenile hormone action: A 2007 perspective
-
Riddiford LM (2008) Juvenile hormone action: A 2007 perspective. J Insect Physiol 54:895-901.
-
(2008)
J Insect Physiol
, vol.54
, pp. 895-901
-
-
Riddiford, L.M.1
-
14
-
-
0036927543
-
Genomics and integrative analyses of division of labor in honeybee colonies
-
Robinson GE (2002) Genomics and integrative analyses of division of labor in honeybee colonies. Am Nat 160(Suppl 6):S160-S172.
-
(2002)
Am Nat
, vol.160
, Issue.SUPPL. 6
-
-
Robinson, G.E.1
-
15
-
-
77249129746
-
Nuclear factor-kappaB is a critical mediator of stress-impaired neurogenesis and depressive behavior
-
Koo JW, Russo SJ, Ferguson D, Nestler EJ, Duman RS (2010) Nuclear factor-kappaB is a critical mediator of stress-impaired neurogenesis and depressive behavior. Proc Natl Acad Sci USA 107:2669-2674.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 2669-2674
-
-
Koo, J.W.1
Russo, S.J.2
Ferguson, D.3
Nestler, E.J.4
Duman, R.S.5
-
16
-
-
33846252240
-
Genome-wide atlas of gene expression in the adult mouse brain
-
DOI 10.1038/nature05453, PII NATURE05453
-
Lein ES, et al. (2007) Genome-wide atlas of gene expression in the adult mouse brain. Nature 445:168-176. (Pubitemid 46095716)
-
(2007)
Nature
, vol.445
, Issue.7124
, pp. 168-176
-
-
Lein, E.S.1
Hawrylycz, M.J.2
Ao, N.3
Ayres, M.4
Bensinger, A.5
Bernard, A.6
Boe, A.F.7
Boguski, M.S.8
Brockway, K.S.9
Byrnes, E.J.10
Chen, L.11
Chen, L.12
Chen, T.-M.13
Chin, M.C.14
Chong, J.15
Crook, B.E.16
Czaplinska, A.17
Dang, C.N.18
Datta, S.19
Dee, N.R.20
Desaki, A.L.21
Desta, T.22
Diep, E.23
Dolbeare, T.A.24
Donelan, M.J.25
Dong, H.-W.26
Dougherty, J.G.27
Duncan, B.J.28
Ebbert, A.J.29
Eichele, G.30
Estin, L.K.31
Faber, C.32
Facer, B.A.33
Fields, R.34
Fischer, S.R.35
Fliss, T.P.36
Frensley, C.37
Gates, S.N.38
Glattfelder, K.J.39
Halverson, K.R.40
Hart, M.R.41
Hohmann, J.G.42
Howell, M.P.43
Jeung, D.P.44
Johnson, R.A.45
Karr, P.T.46
Kawal, R.47
Kidney, J.M.48
Knapik, R.H.49
Kuan, C.L.50
Lake, J.H.51
Laramee, A.R.52
Larsen, K.D.53
Lau, C.54
Lemon, T.A.55
Liang, A.J.56
Liu, Y.57
Luong, L.T.58
Michaels, J.59
Morgan, J.J.60
Morgan, R.J.61
Mortrud, M.T.62
Mosqueda, N.F.63
Ng, L.L.64
Ng, R.65
Orta, G.J.66
Overly, C.C.67
Pak, T.H.68
Parry, S.E.69
Pathak, S.D.70
Pearson, O.C.71
Puchalski, R.B.72
Riley, Z.L.73
Rockett, H.R.74
Rowland, S.A.75
Royall, J.J.76
Ruiz, M.J.77
Sarno, N.R.78
Schaffnit, K.79
Shapovalova, N.V.80
Sivisay, T.81
Slaughterbeck, C.R.82
Smith, S.C.83
Smith, K.A.84
Smith, B.I.85
Sodt, A.J.86
Stewart, N.N.87
Stumpf, K.-R.88
Sunkin, S.M.89
Sutram, M.90
Tam, A.91
Teemer, C.D.92
Thaller, C.93
Thompson, C.L.94
Varnam, L.R.95
Visel, A.96
Whitlock, R.M.97
Wohnoutka, P.E.98
Wolkey, C.K.99
more..
-
17
-
-
0009704167
-
-
Elsevier, New York
-
Pfaff DW, Arnold AP, Etgen AM, Rubin RT, Fahrbach SE, eds (2009) Hormones, Brain and Behavior (Elsevier, New York).
-
(2009)
Hormones, Brain and Behavior
-
-
Pfaff, D.W.1
Arnold, A.P.2
Etgen, A.M.3
Rubin, R.T.4
Fahrbach, S.E.5
-
18
-
-
71249164368
-
Schlank, a member of the ceramide synthase family controls growth and body fat in Drosophila
-
Bauer R, et al. (2009) Schlank, a member of the ceramide synthase family controls growth and body fat in Drosophila. EMBO J 28:3706-3716.
-
(2009)
EMBO J
, vol.28
, pp. 3706-3716
-
-
Bauer, R.1
-
19
-
-
77955484846
-
Identifying tightly regulated and variably expressed networks by Differential Rank Conservation (DIRAC)
-
Eddy JA, Hood L, Price ND, Geman D (2010) Identifying tightly regulated and variably expressed networks by Differential Rank Conservation (DIRAC). PLOS Comput Biol 6:e1000792.
-
(2010)
PLOS Comput Biol
, vol.6
-
-
Eddy, J.A.1
Hood, L.2
Price, N.D.3
Geman, D.4
-
20
-
-
33947281456
-
The gene vitellogenin has multiple coordinating effects on social organization
-
Nelson CM, Ihle KE, Fondrk MK, Page RE, Amdam GV (2007) The gene vitellogenin has multiple coordinating effects on social organization. PLoS Biol 5:e62.
-
(2007)
PLoS Biol
, vol.5
-
-
Nelson, C.M.1
Ihle, K.E.2
Fondrk, M.K.3
Page, R.E.4
Amdam, G.V.5
-
21
-
-
33745586053
-
FlyTF: A systematic review of site-specific transcription factors in the fruit fly Drosophila melanogaster
-
DOI 10.1093/bioinformatics/btl143
-
Adryan B, Teichmann SA (2006) FlyTF: A systematic review of site-specific transcription factors in the fruit fly Drosophila melanogaster. Bioinformatics 22:1532-1533. (Pubitemid 43985326)
-
(2006)
Bioinformatics
, vol.22
, Issue.12
, pp. 1532-1533
-
-
Adryan, B.1
Teichmann, S.A.2
-
22
-
-
33750834169
-
Genomic dissection of behavioral maturation in the honey bee
-
DOI 10.1073/pnas.0606909103
-
Whitfield CW, et al. (2006) Genomic dissection of behavioral maturation in the honey bee. Proc Natl Acad Sci USA 103:16068-16075. (Pubitemid 44715152)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.44
, pp. 16068-16075
-
-
Whitfield, C.W.1
Ben-Shahar, Y.2
Brillet, C.3
Leoncini, I.4
Crauser, D.5
LeConte, Y.6
Rodriguez-Zas, S.7
Robinson, G.E.8
-
23
-
-
0028974628
-
The effects of colony-level selection on the social organization of honey bee (Apis mellifera L.) colonies: Colony-level components of pollen hoarding
-
Page RE, Fondrk MK (1995) The effects of colony-level selection on the social organization of honey bee (Apis mellifera L.) colonies: Colony-level components of pollen hoarding. Behav Ecol Sociobiol 36:135-144.
-
(1995)
Behav Ecol Sociobiol
, vol.36
, pp. 135-144
-
-
Page, R.E.1
Fondrk, M.K.2
-
24
-
-
0001538089
-
Hierarchical classification of community data
-
Gauch HG, Whittaker RH (1981) Hierarchical classification of community data. J Ecol 69:537-557.
-
(1981)
J Ecol
, vol.69
, pp. 537-557
-
-
Gauch, H.G.1
Whittaker, R.H.2
-
25
-
-
0002471149
-
The comparison of dendrograms by objective methods
-
Sokal RR, Rohlf FJ (1962) The comparison of dendrograms by objective methods. Taxon 11:33-40.
-
(1962)
Taxon
, vol.11
, pp. 33-40
-
-
Sokal, R.R.1
Rohlf, F.J.2
-
26
-
-
2942573099
-
Statistical significance for hierarchical clustering in genetic association and microarray expression studies
-
Levenstien MA, Yang Y, Ott J (2003) Statistical significance for hierarchical clustering in genetic association and microarray expression studies. BMC Bioinformatics 4:62.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 62
-
-
Levenstien, M.A.1
Yang, Y.2
Ott, J.3
-
27
-
-
33745612095
-
Pvclust: An R package for assessing the uncertainty in hierarchical clustering
-
DOI 10.1093/bioinformatics/btl117
-
Suzuki R, Shimodaira H (2006) Pvclust: An R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22:1540-1542. (Pubitemid 43985330)
-
(2006)
Bioinformatics
, vol.22
, Issue.12
, pp. 1540-1542
-
-
Suzuki, R.1
Shimodaira, H.2
-
28
-
-
76849088987
-
Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances
-
Kim J, et al. (2010) Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances. PLOS Comput Biol 6:e1000652.
-
(2010)
PLOS Comput Biol
, vol.6
-
-
Kim, J.1
-
29
-
-
33747813561
-
The Inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
-
Bonneau R, et al. (2006) The Inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo. Genome Biol 7:R36.
-
(2006)
Genome Biol
, vol.7
-
-
Bonneau, R.1
|