Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples

BMC Genomics

Volumn 13, Issue 1, 2012, Pages

  Mullen, Michael P ^a   Creevey, Christopher J ^b   Berry, Donagh P ^c   McCabe, Matt S ^b   Magee, David A ^d   Howard, Dawn J ^a   Killeen, Aideen P ^b   Park, Stephen D ^d   McGettigan, Paul A ^d   Lucy, Matt C ^e   MacHugh, David E ^d   Waters, Sinead M ^b  

^a ANIMAL AND GRASSLAND RESEARCH AND INNOVATION CENTRE   (Ireland)

^b Moorepark ^*

^c University College Dublin   (Ireland)

^d UNIVERSITY COLLEGE DUBLIN   (Ireland)

^e UNIVERSITY OF MISSOURI   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; MICRORNA; TRANSCRIPTION FACTOR;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; BULL (BOVINE); CONTROLLED STUDY; DNA POLYMORPHISM; DNA SEQUENCE; ESR2 GENE; FERTILITY; GCK GENE; GENE; GENE FREQUENCY; GENE LOCATION; GENE TARGETING; GENETIC ANALYSIS; GENETIC VARIABILITY; GENOTYPE; GH1 GENE; GHR GENE; GHRH GENE; HIGH THROUGHPUT SCREENING; HIGH THROUGHPUT SEQUENCING; HK1 GENE; HK3 GENE; IGF1 GENE; IGF2 GENE; IGF2R GENE; IGFBP3 GENE; IGFBP5 GENE; INDEL MUTATION; IRS4 GENE; MAPK9 GENE; MILK PRODUCTION; NONHUMAN; NR2F2 GENE; PHENOTYPE; PIK3R2 GENE; Q95M43 GENE; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; SIRT2 GENE; SLC2A1 GENE; SLC5A1 GENE; SST GENE; STAT5B GENE; ANIMAL; BINDING SITE; CATTLE; GENETICS; GENOMICS; METABOLISM; NUCLEOTIDE SEQUENCE; REPRODUCIBILITY;

ANIMALIA; BOS; FRIESIA; MAMMALIA;

ANIMALS; BASE SEQUENCE; BINDING SITES; CATTLE; FERTILITY; GENE FREQUENCY; GENOMICS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MICRORNAS; POLYMORPHISM, SINGLE NUCLEOTIDE; REPRODUCIBILITY OF RESULTS; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS;

EID: 84862814314     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-16     Document Type: Article

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