-
1
-
-
34047263161
-
Association of a single nucleotide polymorphism in SPP1 with growth traits and twinning in a cattle population selected for twinning rate
-
Allan, M. F., R. M. Thallman, R. A. Cushman, S. E. Echternkamp, S. N. White, L. A. Kuehn, E. Casas, and T. P. L. Smith. 2007. Association of a single nucleotide polymorphism in SPP1 with growth traits and twinning in a cattle population selected for twinning rate. J. Anim. Sci. 85:341-347.
-
(2007)
J. Anim. Sci
, vol.85
, pp. 341-347
-
-
Allan, M.F.1
Thallman, R.M.2
Cushman, R.A.3
Echternkamp, S.E.4
White, S.N.5
Kuehn, L.A.6
Casas, E.7
Smith, T.P.L.8
-
2
-
-
34047132057
-
A manual for use of MTDFREML
-
Draft, USDA-ARS, Clay Center, NE
-
Boldman, K. G., L. A. Kriese, L. D. Van Vleck, C. P. Van Tassell, and S. D. Kachman. 1995. A manual for use of MTDFREML. A set of programs to obtain estimates of variances and covariances (Draft). USDA-ARS, Clay Center, NE.
-
(1995)
A set of programs to obtain estimates of variances and covariances
-
-
Boldman, K.G.1
Kriese, L.A.2
Van Vleck, L.D.3
Van Tassell, C.P.4
Kachman, S.D.5
-
3
-
-
33745690923
-
Effects of calpastatin and ?-calpain markers in beef cattle on tenderness traits
-
Casas, E., S. N. White, T. L. Wheeler, S. D. Shackelford, M. Koohmaraie, D. G. Riley, C. C. Chase Jr., D. D. Johnson, and T. P. L. Smith. 2006. Effects of calpastatin and ?-calpain markers in beef cattle on tenderness traits. J. Anim. Sci. 84:520-525.
-
(2006)
J. Anim. Sci
, vol.84
, pp. 520-525
-
-
Casas, E.1
White, S.N.2
Wheeler, T.L.3
Shackelford, S.D.4
Koohmaraie, M.5
Riley, D.G.6
Chase Jr., C.C.7
Johnson, D.D.8
Smith, T.P.L.9
-
4
-
-
2942596004
-
Evidence for quantitative trait loci affecting twinning rate in North American Holstein cattle
-
Cruickshank, J., M. R. Dentine, P. J. Berger, and B. W. Kirkpatrick. 2004. Evidence for quantitative trait loci affecting twinning rate in North American Holstein cattle. Anim. Genet. 35:206-212.
-
(2004)
Anim. Genet
, vol.35
, pp. 206-212
-
-
Cruickshank, J.1
Dentine, M.R.2
Berger, P.J.3
Kirkpatrick, B.W.4
-
5
-
-
33644782396
-
Evaluation of ovulation rate and ovarian phenotype in puberal heifers from a cattle population selected for increased ovulation rate
-
Cushman, R. A., M. F. Allan, G. D. Snowder, R. M. Thallman, and S. E. Echternkamp. 2005. Evaluation of ovulation rate and ovarian phenotype in puberal heifers from a cattle population selected for increased ovulation rate. J. Anim. Sci. 83:1839-1844.
-
(2005)
J. Anim. Sci
, vol.83
, pp. 1839-1844
-
-
Cushman, R.A.1
Allan, M.F.2
Snowder, G.D.3
Thallman, R.M.4
Echternkamp, S.E.5
-
6
-
-
0002900844
-
Efficiency of animal production-Molding the biological components
-
Dickerson, G. E. 1970. Efficiency of animal production-Molding the biological components. J. Anim. Sci. 30:849-859.
-
(1970)
J. Anim. Sci
, vol.30
, pp. 849-859
-
-
Dickerson, G.E.1
-
7
-
-
0034241746
-
Additive genetic parameter estimates for heifer pregnancy and subsequent reproduction in Angus females
-
Doyle, S. P., B. L. Golden, R. D. Green, and J. S. Brinks. 2000. Additive genetic parameter estimates for heifer pregnancy and subsequent reproduction in Angus females. J. Anim. Sci. 78:2091-2098.
-
(2000)
J. Anim. Sci
, vol.78
, pp. 2091-2098
-
-
Doyle, S.P.1
Golden, B.L.2
Green, R.D.3
Brinks, J.S.4
-
8
-
-
62149100479
-
-
Echternkamp, S. E. 2000. Endocrinology of increased ovarian folliculogenesis in cattle selected for twin births. J. Anim. Sci. (ESuppl.) http://www.asas.org/JAS/symposia/proceedings/0935.pdf Accessed Jan. 31, 2005.
-
Echternkamp, S. E. 2000. Endocrinology of increased ovarian folliculogenesis in cattle selected for twin births. J. Anim. Sci. (ESuppl.) http://www.asas.org/JAS/symposia/proceedings/0935.pdf Accessed Jan. 31, 2005.
-
-
-
-
9
-
-
0032611388
-
Effects of twinning on postpartum reproductive performance in cattle selected for twin births
-
Echternkamp, S. E., and K. E. Gregory. 1999a. Effects of twinning on postpartum reproductive performance in cattle selected for twin births. J. Anim. Sci. 77:48-60.
-
(1999)
J. Anim. Sci
, vol.77
, pp. 48-60
-
-
Echternkamp, S.E.1
Gregory, K.E.2
-
10
-
-
0032609294
-
Effects of twinning on gestation length, retained placenta, and dystocia
-
Echternkamp, S. E., and K. E. Gregory. 1999b. Effects of twinning on gestation length, retained placenta, and dystocia. J. Anim. Sci. 77:39-47.
-
(1999)
J. Anim. Sci
, vol.77
, pp. 39-47
-
-
Echternkamp, S.E.1
Gregory, K.E.2
-
11
-
-
37049006251
-
Increased calf production in cattle selected for twin ovulations
-
Echternkamp, S. E., R. M. Thallman, R. A. Cushman, M. F. Allan, and K. E. Gregory. 2007. Increased calf production in cattle selected for twin ovulations. J. Anim. Sci. 85:3228-3238.
-
(2007)
J. Anim. Sci
, vol.85
, pp. 3228-3238
-
-
Echternkamp, S.E.1
Thallman, R.M.2
Cushman, R.A.3
Allan, M.F.4
Gregory, K.E.5
-
12
-
-
0031978181
-
Base-calling of automated sequencer traces using Phred. II. Error probabilities
-
Ewing, B., and P. Green. 1998. Base-calling of automated sequencer traces using Phred. II. Error probabilities. Genome Res. 8:186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
13
-
-
0031955518
-
Base-calling of automated sequencer traces using Phred. I. Accuracy assessment
-
Ewing, B., L. Hillier, M. C. Wendl, and P. Green. 1998. Base-calling of automated sequencer traces using Phred. I. Accuracy assessment. Genome Res. 8:175-185.
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
14
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon, D., C. Abajian, and P. Green. 1998. Consed: A graphical tool for sequence finishing. Genome Res. 8:195-202.
-
(1998)
Genome Res
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
15
-
-
0031137744
-
Genetic and environmental parameters for ovulation rate, twinning rate, and weight traits in a cattle population selected for twinning
-
Gregory, K. E., G. L. Bennett, L. D. Van Vleck, S. E. Echternkamp, and L. V. Cundiff. 1997. Genetic and environmental parameters for ovulation rate, twinning rate, and weight traits in a cattle population selected for twinning. J. Anim. Sci. 75:1213-1222.
-
(1997)
J. Anim. Sci
, vol.75
, pp. 1213-1222
-
-
Gregory, K.E.1
Bennett, G.L.2
Van Vleck, L.D.3
Echternkamp, S.E.4
Cundiff, L.V.5
-
16
-
-
0030155995
-
Effects of twinning on dystocia, calf survival, calf growth, carcass traits, and cow productivity
-
Gregory, K. E., S. E. Echternkamp, and L. V. Cundiff. 1996. Effects of twinning on dystocia, calf survival, calf growth, carcass traits, and cow productivity. J. Anim. Sci. 74:1223-1233.
-
(1996)
J. Anim. Sci
, vol.74
, pp. 1223-1233
-
-
Gregory, K.E.1
Echternkamp, S.E.2
Cundiff, L.V.3
-
17
-
-
0034540898
-
Initial results of genomic scans for ovulation rate in a cattle population selected for increased twinning rate
-
Kappes, S. M., G. L. Bennett, J. W. Keele, S. E. Echternkamp, K. E. Gregory, and R. M. Thallman. 2000. Initial results of genomic scans for ovulation rate in a cattle population selected for increased twinning rate. J. Anim. Sci. 78:3053-3059.
-
(2000)
J. Anim. Sci
, vol.78
, pp. 3053-3059
-
-
Kappes, S.M.1
Bennett, G.L.2
Keele, J.W.3
Echternkamp, S.E.4
Gregory, K.E.5
Thallman, R.M.6
-
18
-
-
24644478059
-
The COPG2, DCN, and SDHD genes are biallelically expressed in cattle
-
Khatib, H. 2005. The COPG2, DCN, and SDHD genes are biallelically expressed in cattle. Mamm. Genome 16:545-552.
-
(2005)
Mamm. Genome
, vol.16
, pp. 545-552
-
-
Khatib, H.1
-
19
-
-
34247846074
-
Detection of single nucleotide polymorphisms associated with ultransonic backfat depth in a segregating Meishan × White Composite population
-
Kuehn, L. A., G. A. Rohrer, D. J. Nonneman, R. M. Thallman, and K. A. Leymaster. 2007. Detection of single nucleotide polymorphisms associated with ultransonic backfat depth in a segregating Meishan × White Composite population. J. Anim. Sci. 85:1111-1119.
-
(2007)
J. Anim. Sci
, vol.85
, pp. 1111-1119
-
-
Kuehn, L.A.1
Rohrer, G.A.2
Nonneman, D.J.3
Thallman, R.M.4
Leymaster, K.A.5
-
20
-
-
0033808681
-
A primary screen of the bovine genome for quantitative trait loci affecting twinning rate
-
Lien, S., A. Karlsen, G. Klemetsdal, D. I. Vage, I. Olsaker, H. Klungland, M. Aasland, B. Heringstad, J. Ruane, and L. Gomez-Raya. 2000. A primary screen of the bovine genome for quantitative trait loci affecting twinning rate. Mamm. Genome 11:877-882.
-
(2000)
Mamm. Genome
, vol.11
, pp. 877-882
-
-
Lien, S.1
Karlsen, A.2
Klemetsdal, G.3
Vage, D.I.4
Olsaker, I.5
Klungland, H.6
Aasland, M.7
Heringstad, B.8
Ruane, J.9
Gomez-Raya, L.10
-
21
-
-
33645971631
-
Genetic parameters for stayability, stayability at calving, and stayability at weaning to specified ages for Hereford cows
-
Martinez, G. E., R. M. Koch, L. V. Cundiff, K. E. Gregory, S. D. Kachman, and L. D. Van Vleck. 2005. Genetic parameters for stayability, stayability at calving, and stayability at weaning to specified ages for Hereford cows. J. Anim. Sci. 83:2033-2042.
-
(2005)
J. Anim. Sci
, vol.83
, pp. 2033-2042
-
-
Martinez, G.E.1
Koch, R.M.2
Cundiff, L.V.3
Gregory, K.E.4
Kachman, S.D.5
Van Vleck, L.D.6
-
22
-
-
0039099697
-
Conception to consumption: The economics of genetic improvement
-
Sheridan, WY
-
Melton, B. E. 1995. Conception to consumption: The economics of genetic improvement. Pages 40-47 in Proc. Annu. Beef Improvement Fed. Mtg., Sheridan, WY.
-
(1995)
Proc. Annu. Beef Improvement Fed. Mtg
, pp. 40-47
-
-
Melton, B.E.1
-
23
-
-
0036259757
-
Fine mapping of a quantitative trait locus for twinning rate using combined linkage and linkage disequilibrium mapping
-
Meuwissen, T. H. E., A. Karlsen, S. Lien, I. Olsaker, and M. E. Goddard. 2002. Fine mapping of a quantitative trait locus for twinning rate using combined linkage and linkage disequilibrium mapping. Genetics 161:373-379.
-
(2002)
Genetics
, vol.161
, pp. 373-379
-
-
Meuwissen, T.H.E.1
Karlsen, A.2
Lien, S.3
Olsaker, I.4
Goddard, M.E.5
-
24
-
-
18444412259
-
Asb4, Ata3, and Dcn are novel imprinted genes identified by high-throughput screening using RIKEN cDNA microarray
-
Mizuno, Y., Y. Sotomaru, Y. Katsuzawa, T. Kono, M. Meguro, M. Oshimura, J. Kawai, Y. Tomaru, H. Kiyosawa, I. Nikaido, H. Amanuma, Y. Hayashizaki, and Y. Okazaki. 2002. Asb4, Ata3, and Dcn are novel imprinted genes identified by high-throughput screening using RIKEN cDNA microarray. Biochem. Biophys. Res. Commun. 290:1499-1505.
-
(2002)
Biochem. Biophys. Res. Commun
, vol.290
, pp. 1499-1505
-
-
Mizuno, Y.1
Sotomaru, Y.2
Katsuzawa, Y.3
Kono, T.4
Meguro, M.5
Oshimura, M.6
Kawai, J.7
Tomaru, Y.8
Kiyosawa, H.9
Nikaido, I.10
Amanuma, H.11
Hayashizaki, Y.12
Okazaki, Y.13
-
25
-
-
9744254593
-
Association of markers in the bovine CAPN1 gene with meat tenderness in large crossbred populations that sample influential industry sires
-
Page, B. T., E. Casas, R. L. Quaas, R. M. Thallman, T. L. Wheeler, S. D. Shackelford, M. Koohmaraie, S. N. White, G. L. Bennett, J. W. Keele, M. E. Dikeman, and T. P. L. Smith. 2004. Association of markers in the bovine CAPN1 gene with meat tenderness in large crossbred populations that sample influential industry sires. J. Anim. Sci. 82:3474-3481.
-
(2004)
J. Anim. Sci
, vol.82
, pp. 3474-3481
-
-
Page, B.T.1
Casas, E.2
Quaas, R.L.3
Thallman, R.M.4
Wheeler, T.L.5
Shackelford, S.D.6
Koohmaraie, M.7
White, S.N.8
Bennett, G.L.9
Keele, J.W.10
Dikeman, M.E.11
Smith, T.P.L.12
-
26
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen, S., and H. Skaletsky. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
-
(2000)
Methods Mol. Biol
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
27
-
-
33645977195
-
Association of single nucleotide polymorphisms in the leptin gene with carcass and meat quality traits of beef cattle
-
Schenkel, F. S., S. P. Miller, X. Ye, S. S. Moore, J. D. Nkrumah, C. Li, J. Yu, I. B. Mandell, J. W. Wilton, and J. L. Williams. 2005. Association of single nucleotide polymorphisms in the leptin gene with carcass and meat quality traits of beef cattle. J. Anim. Sci. 83:2009-2020.
-
(2005)
J. Anim. Sci
, vol.83
, pp. 2009-2020
-
-
Schenkel, F.S.1
Miller, S.P.2
Ye, X.3
Moore, S.S.4
Nkrumah, J.D.5
Li, C.6
Yu, J.7
Mandell, I.B.8
Wilton, J.W.9
Williams, J.L.10
-
28
-
-
35948981875
-
Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters
-
Shen, L., Y. Kondo, Y. Guo, J. Zhang, L. Zhang, S. Ahmed, J. Shu, X. Chen, R. A. Waterland, and J.-P. Issa. 2007. Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. PLoS Genet. 3:2023-2036.
-
(2007)
PLoS Genet
, vol.3
, pp. 2023-2036
-
-
Shen, L.1
Kondo, Y.2
Guo, Y.3
Zhang, J.4
Zhang, L.5
Ahmed, S.6
Shu, J.7
Chen, X.8
Waterland, R.A.9
Issa, J.-P.10
-
29
-
-
0037396735
-
Identification of novel imprinted genes in a genome-wide screen for maternal methylation
-
Smith, R. J., W. Dean, G. Konfortova, and G. Kelsey. 2003. Identification of novel imprinted genes in a genome-wide screen for maternal methylation. Genome Res. 13:558-569.
-
(2003)
Genome Res
, vol.13
, pp. 558-569
-
-
Smith, R.J.1
Dean, W.2
Konfortova, G.3
Kelsey, G.4
-
30
-
-
25444473675
-
Linkage mapping bovine EST-based SNP
-
Snelling, W. M., E. Casas, R. T. Stone, J. W. Keele, G. P. Harhay, G. L. Bennett, and T. P. L. Smith. 2005. Linkage mapping bovine EST-based SNP. BMC Genomics 6:74.
-
(2005)
BMC Genomics
, vol.6
, pp. 74
-
-
Snelling, W.M.1
Casas, E.2
Stone, R.T.3
Keele, J.W.4
Harhay, G.P.5
Bennett, G.L.6
Smith, T.P.L.7
-
31
-
-
39749087685
-
-
Snelling, W. M., R. Chiu, J. E. Schein, M. Hobbs, C. A. Abbey, D. L. Adelson, J. Aerts, G. L. Bennett, I. E. Bosdet, M. Boussaha, R. Brauning, A. R. Caetano, M. M. Costa, A. M. Crawford, B. P. Dalyrmple, A. Eggen, A. Everts-van der Wind, S. Floriot, M. Gautier, C. A. Gill, R. D. Green, R. Holt, O. Jann, S. J. M. Jones, S. M. Kappes, J. W. Keele, P. J. de Jong, D. M. Larkin, H. A. Lewin, J. C. McEwan, S. McKay, M. A. Marra, C. A. Mathewson, L. K. Matukumalli, S. S. Moore, B. Murdoch, F. W. Nicholas, K. Osoegawa, A. Roy, H. Salih, L. Schibler, R. D. Schnabel, L. Silveri, L. C. Skow, T. P. L. Smith, T. S. Sonstegard, J. F. Taylor, R. Tellam, C. P. Van Tassell, J. L. Williams, J. E. Womack, N. H. Wye, G. Yang, and S. Zhao. 2007. A physical map of the bovine genome. Genome Biol. 8:R165.
-
Snelling, W. M., R. Chiu, J. E. Schein, M. Hobbs, C. A. Abbey, D. L. Adelson, J. Aerts, G. L. Bennett, I. E. Bosdet, M. Boussaha, R. Brauning, A. R. Caetano, M. M. Costa, A. M. Crawford, B. P. Dalyrmple, A. Eggen, A. Everts-van der Wind, S. Floriot, M. Gautier, C. A. Gill, R. D. Green, R. Holt, O. Jann, S. J. M. Jones, S. M. Kappes, J. W. Keele, P. J. de Jong, D. M. Larkin, H. A. Lewin, J. C. McEwan, S. McKay, M. A. Marra, C. A. Mathewson, L. K. Matukumalli, S. S. Moore, B. Murdoch, F. W. Nicholas, K. Osoegawa, A. Roy, H. Salih, L. Schibler, R. D. Schnabel, L. Silveri, L. C. Skow, T. P. L. Smith, T. S. Sonstegard, J. F. Taylor, R. Tellam, C. P. Van Tassell, J. L. Williams, J. E. Womack, N. H. Wye, G. Yang, and S. Zhao. 2007. A physical map of the bovine genome. Genome Biol. 8:R165.
-
-
-
-
32
-
-
27644585151
-
-
Version 2.000. USDA-ARS, US Meat Animal Research Center, Clay Center, NE
-
Thallman, R. M. 2002. User's Manual for GenoProb Version 2.000. USDA-ARS, US Meat Animal Research Center, Clay Center, NE.
-
(2002)
User's Manual for GenoProb
-
-
Thallman, R.M.1
-
33
-
-
0035218750
-
Efficient computation of genotype probabilities for loci with many alleles: I. Allelic peeling
-
Thallman, R. M., G. L. Bennett, J. W. Keele, and S. M. Kappes. 2001a. Efficient computation of genotype probabilities for loci with many alleles: I. Allelic peeling. J. Anim. Sci. 79:26-33.
-
(2001)
J. Anim. Sci
, vol.79
, pp. 26-33
-
-
Thallman, R.M.1
Bennett, G.L.2
Keele, J.W.3
Kappes, S.M.4
-
34
-
-
0035218709
-
Efficient computation of genotype probabilities for loci with many alleles: II. Iterative method for large, complex pedigrees
-
Thallman, R. M., G. L. Bennett, J. W. Keele, and S. M. Kappes. 2001b. Efficient computation of genotype probabilities for loci with many alleles: II. Iterative method for large, complex pedigrees. J. Anim. Sci. 79:34-44.
-
(2001)
J. Anim. Sci
, vol.79
, pp. 34-44
-
-
Thallman, R.M.1
Bennett, G.L.2
Keele, J.W.3
Kappes, S.M.4
-
35
-
-
4243192491
-
Characterization of quantitative loci for growth and meat quality in a cross between commercial breeds of swine
-
Thomsen, H., H. K. Lee, M. F. Rothchild, M. Malek, and J. C. M. Dekkers. 2004. Characterization of quantitative loci for growth and meat quality in a cross between commercial breeds of swine. J. Anim. Sci. 82:2213-2228.
-
(2004)
J. Anim. Sci
, vol.82
, pp. 2213-2228
-
-
Thomsen, H.1
Lee, H.K.2
Rothchild, M.F.3
Malek, M.4
Dekkers, J.C.M.5
-
36
-
-
0030095533
-
Genetic trend and environmental effects in a population of cattle selected for twinning
-
Van Vleck, L. D., and K. E. Gregory. 1996. Genetic trend and environmental effects in a population of cattle selected for twinning. J. Anim. Sci. 74:522-528.
-
(1996)
J. Anim. Sci
, vol.74
, pp. 522-528
-
-
Van Vleck, L.D.1
Gregory, K.E.2
-
37
-
-
33750446974
-
Assessment of genomic imprinting of SLC38A4, NNAT, NAPIL5, and H19 in cattle
-
Zaitoun, I., and H. Khatib. 2006. Assessment of genomic imprinting of SLC38A4, NNAT, NAPIL5, and H19 in cattle. BMC Genet. 7:49.
-
(2006)
BMC Genet
, vol.7
, pp. 49
-
-
Zaitoun, I.1
Khatib, H.2
|