메뉴 건너뛰기




Volumn 50, Issue 4-5, 2012, Pages 263-269

C-terminal truncation of glutamate decarboxylase from Lactobacillus brevis CGMCC 1306 extends its activity toward near-neutral pH

Author keywords

C terminal truncation; Glutamate decarboxylase; Homology model; PH dependence; Site directed mutagenesis

Indexed keywords

C-TERMINAL TRUNCATION; GLUTAMATE DECARBOXYLASE; HOMOLOGY MODELS; PH DEPENDENCE; SITE DIRECTED MUTAGENESIS;

EID: 84862798002     PISSN: 01410229     EISSN: 18790909     Source Type: Journal    
DOI: 10.1016/j.enzmictec.2012.01.010     Document Type: Article
Times cited : (45)

References (32)
  • 1
    • 0034605576 scopus 로고    scopus 로고
    • Enzymatic and structural aspects on glutamate decarboxylase
    • Ueno H. Enzymatic and structural aspects on glutamate decarboxylase. J Mol Catal B: Enzym 2000, 10:67-79.
    • (2000) J Mol Catal B: Enzym , vol.10 , pp. 67-79
    • Ueno, H.1
  • 3
    • 0025816520 scopus 로고
    • The structural and functional heterogeneity of glutamic acid decarboxylase: a review
    • Erlander M.G., Tobin A.J. The structural and functional heterogeneity of glutamic acid decarboxylase: a review. Neurochem Res 1991, 16:215-226.
    • (1991) Neurochem Res , vol.16 , pp. 215-226
    • Erlander, M.G.1    Tobin, A.J.2
  • 4
    • 0030014203 scopus 로고    scopus 로고
    • Calmodulin binding to glutamate decarboxylase is required for regulation of glutamate and GABA metabolism and normal development in plants
    • Baum G., Lev-Yadun S., Fridmann Y., Arazi T., Katsnelson H., Zik M., et al. Calmodulin binding to glutamate decarboxylase is required for regulation of glutamate and GABA metabolism and normal development in plants. EMBO J 1996, 15:2988-2996.
    • (1996) EMBO J , vol.15 , pp. 2988-2996
    • Baum, G.1    Lev-Yadun, S.2    Fridmann, Y.3    Arazi, T.4    Katsnelson, H.5    Zik, M.6
  • 5
    • 0032146950 scopus 로고    scopus 로고
    • Two isoforms of glutamate decarboxylase in Arabidopsis are regulated by calcium/calmodulin and differ in organ distribution
    • Zik M., Arazi T., Snedden W.A., Fromm H. Two isoforms of glutamate decarboxylase in Arabidopsis are regulated by calcium/calmodulin and differ in organ distribution. Plant Mol Biol 1998, 37:967-975.
    • (1998) Plant Mol Biol , vol.37 , pp. 967-975
    • Zik, M.1    Arazi, T.2    Snedden, W.A.3    Fromm, H.4
  • 6
    • 9444285788 scopus 로고    scopus 로고
    • Escherichia coli acid resistance: tales of an amateur acidophile
    • Foster J.W. Escherichia coli acid resistance: tales of an amateur acidophile. Nat Rev Microbiol 2004, 2:898-907.
    • (2004) Nat Rev Microbiol , vol.2 , pp. 898-907
    • Foster, J.W.1
  • 8
    • 33745752814 scopus 로고    scopus 로고
    • Escherichia coli acid resistance: pH-sensing, activation by chloride and autoinhibition in GadB
    • Gut H., Pennacchietti E., John R.A., Bossa F., Capitani G., De Biase D., et al. Escherichia coli acid resistance: pH-sensing, activation by chloride and autoinhibition in GadB. EMBO J 2006, 25:2643-2651.
    • (2006) EMBO J , vol.25 , pp. 2643-2651
    • Gut, H.1    Pennacchietti, E.2    John, R.A.3    Bossa, F.4    Capitani, G.5    De Biase, D.6
  • 9
    • 78449276921 scopus 로고    scopus 로고
    • Lactic acid bacterial cell factories for gamma-aminobutyric acid
    • Li H., Cao Y. Lactic acid bacterial cell factories for gamma-aminobutyric acid. Amino Acids 2010, 39:1107-1116.
    • (2010) Amino Acids , vol.39 , pp. 1107-1116
    • Li, H.1    Cao, Y.2
  • 10
    • 33748319078 scopus 로고    scopus 로고
    • Cloning and expression of a full-length glutamate decarboxylase gene from Lactobacillus plantarum
    • Park K.B., Oh S.H. Cloning and expression of a full-length glutamate decarboxylase gene from Lactobacillus plantarum. J Food Sci Nutr 2004, 9:324-329.
    • (2004) J Food Sci Nutr , vol.9 , pp. 324-329
    • Park, K.B.1    Oh, S.H.2
  • 11
    • 77249161111 scopus 로고    scopus 로고
    • Synthesis of γ-aminobutyric acid (GABA) by Lactobacillus plantarum DSM19463: functional grape must beverage and dermatological applications
    • Di Cagno R., Mazzacane F., Rizzello C., De Angelis M., Giuliani G., Meloni M., et al. Synthesis of γ-aminobutyric acid (GABA) by Lactobacillus plantarum DSM19463: functional grape must beverage and dermatological applications. Appl Microbiol Biotechnol 2010, 86:731-741.
    • (2010) Appl Microbiol Biotechnol , vol.86 , pp. 731-741
    • Di Cagno, R.1    Mazzacane, F.2    Rizzello, C.3    De Angelis, M.4    Giuliani, G.5    Meloni, M.6
  • 12
    • 0031178204 scopus 로고    scopus 로고
    • Purification and characterization of glutamate decarboxylase from Lactobacillus brevis IFO 12005
    • Ueno Y., Hayakawa K., Takahashi S., Oda K. Purification and characterization of glutamate decarboxylase from Lactobacillus brevis IFO 12005. Biosci Biotechnol Biochem 1997, 61:1168-1171.
    • (1997) Biosci Biotechnol Biochem , vol.61 , pp. 1168-1171
    • Ueno, Y.1    Hayakawa, K.2    Takahashi, S.3    Oda, K.4
  • 13
    • 33748311964 scopus 로고    scopus 로고
    • Cloning, sequencing and expression of a novel glutamate decarboxylase gene from a newly isolated lactic acid bacterium, Lactobacillus brevis OPK-3
    • Park K.B., Oh S.H. Cloning, sequencing and expression of a novel glutamate decarboxylase gene from a newly isolated lactic acid bacterium, Lactobacillus brevis OPK-3. Bioresour Technol 2007, 98:312-319.
    • (2007) Bioresour Technol , vol.98 , pp. 312-319
    • Park, K.B.1    Oh, S.H.2
  • 14
    • 34248385625 scopus 로고    scopus 로고
    • Biosynthesis of γ-aminobutyric acid (GABA) using immobilized whole cells of Lactobacillus brevis,
    • Huang J., Mei L., Wu H., Lin D. Biosynthesis of γ-aminobutyric acid (GABA) using immobilized whole cells of Lactobacillus brevis,. World J Microbiol Biotechnol 2007, 23:865-871.
    • (2007) World J Microbiol Biotechnol , vol.23 , pp. 865-871
    • Huang, J.1    Mei, L.2    Wu, H.3    Lin, D.4
  • 15
    • 77955886345 scopus 로고    scopus 로고
    • Medium optimization for production of gamma-aminobutyric acid by Lactobacillus brevis NCL912
    • Li H., Qiu T., Gao D., Cao Y. Medium optimization for production of gamma-aminobutyric acid by Lactobacillus brevis NCL912. Amino Acids 2010, 38:1439-1445.
    • (2010) Amino Acids , vol.38 , pp. 1439-1445
    • Li, H.1    Qiu, T.2    Gao, D.3    Cao, Y.4
  • 16
    • 18144365501 scopus 로고    scopus 로고
    • Production of γ-aminobutyric acid (GABA) by Lactobacillus paracasei isolated from traditional fermented foods
    • Komatsuzaki N., Shima J., Kawamoto S., Momose H., Kimura T. Production of γ-aminobutyric acid (GABA) by Lactobacillus paracasei isolated from traditional fermented foods. Food Microbiol 2005, 22:497-504.
    • (2005) Food Microbiol , vol.22 , pp. 497-504
    • Komatsuzaki, N.1    Shima, J.2    Kawamoto, S.3    Momose, H.4    Kimura, T.5
  • 17
    • 77954987934 scopus 로고    scopus 로고
    • Enhanced production of γ-aminobutyric acid using rice bran extracts by Lactobacillus sakei B2-16
    • Kook M.C., Seo M.J., Cheigh C.I., Pyun Y.R., Cho S.C., Park H. Enhanced production of γ-aminobutyric acid using rice bran extracts by Lactobacillus sakei B2-16. J Microbiol Biotechnol 2010, 20:763-766.
    • (2010) J Microbiol Biotechnol , vol.20 , pp. 763-766
    • Kook, M.C.1    Seo, M.J.2    Cheigh, C.I.3    Pyun, Y.R.4    Cho, S.C.5    Park, H.6
  • 18
    • 0029004590 scopus 로고
    • Protein modeling by E-mail
    • Peitsch M.C. Protein modeling by E-mail. Nat Biotechnol 1995, 13:658-660.
    • (1995) Nat Biotechnol , vol.13 , pp. 658-660
    • Peitsch, M.C.1
  • 19
    • 0031473847 scopus 로고    scopus 로고
    • SWISS-MODEL and the Swiss-Pdb viewer: an environment for comparative protein modeling
    • Guex N., Peitsch M.C. SWISS-MODEL and the Swiss-Pdb viewer: an environment for comparative protein modeling. Electrophoresis 1997, 18:2714-2723.
    • (1997) Electrophoresis , vol.18 , pp. 2714-2723
    • Guex, N.1    Peitsch, M.C.2
  • 20
    • 32144432437 scopus 로고    scopus 로고
    • The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
    • Arnold K., Bordoli L., Kopp J., Schwede T. The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 2006, 22:195-201.
    • (2006) Bioinformatics , vol.22 , pp. 195-201
    • Arnold, K.1    Bordoli, L.2    Kopp, J.3    Schwede, T.4
  • 21
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 25:4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 22
    • 0000243829 scopus 로고
    • PROCHECK: a program to check the stereochemical quality of protein structures
    • Laskowski R.A., MacArthur M.W., Moss D.S., Thornton J.M. PROCHECK: a program to check the stereochemical quality of protein structures. J Appl Crystallogr 1993, 26:283-291.
    • (1993) J Appl Crystallogr , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 23
    • 84863813258 scopus 로고    scopus 로고
    • Cloning, sequencing and expression of a glutamate decarboxylase gene from the GABA-producing strain Lactobacillus brevis CGMCC 1306
    • Fan E., Huang J., Hu S., Mei L., Yu K. Cloning, sequencing and expression of a glutamate decarboxylase gene from the GABA-producing strain Lactobacillus brevis CGMCC 1306. Ann Microbiol 2011, 1-10.
    • (2011) Ann Microbiol , pp. 1-10
    • Fan, E.1    Huang, J.2    Hu, S.3    Mei, L.4    Yu, K.5
  • 24
    • 34248165479 scopus 로고    scopus 로고
    • Purification and characterization of glutamate decarboxylase of Lactobacillus brevis CGMCC 1306 isolated from fresh milk
    • Huang J., Mei L., Sheng Q., Yao S., Lin D. Purification and characterization of glutamate decarboxylase of Lactobacillus brevis CGMCC 1306 isolated from fresh milk. Chin J Chem Eng 2007, 15:157-161.
    • (2007) Chin J Chem Eng , vol.15 , pp. 157-161
    • Huang, J.1    Mei, L.2    Sheng, Q.3    Yao, S.4    Lin, D.5
  • 25
    • 38349016165 scopus 로고    scopus 로고
    • Cloning and expression of a full-length glutamate decarboxylase gene from Lactobacillus brevis BH2
    • Kim S.H., Shin B.H., Kim Y.H., Nam S.W., Jeon S.J. Cloning and expression of a full-length glutamate decarboxylase gene from Lactobacillus brevis BH2. Biotechnol Bioprocess Eng 2007, 12:707-712.
    • (2007) Biotechnol Bioprocess Eng , vol.12 , pp. 707-712
    • Kim, S.H.1    Shin, B.H.2    Kim, Y.H.3    Nam, S.W.4    Jeon, S.J.5
  • 26
    • 0041465717 scopus 로고    scopus 로고
    • Crystal structure and functional analysis of Escherichia coli glutamate decarboxylase
    • Capitani G., De Biase D., Aurizi C., Gut H., Bossa F., Grutter M.G. Crystal structure and functional analysis of Escherichia coli glutamate decarboxylase. EMBO J 2003, 22:4027-4037.
    • (2003) EMBO J , vol.22 , pp. 4027-4037
    • Capitani, G.1    De Biase, D.2    Aurizi, C.3    Gut, H.4    Bossa, F.5    Grutter, M.G.6
  • 27
    • 72849177700 scopus 로고
    • Glutamic acid decarboxylase
    • Shukuya R., Schwert G.W. Glutamic acid decarboxylase. J Biol Chem 1960, 235:1653-1657.
    • (1960) J Biol Chem , vol.235 , pp. 1653-1657
    • Shukuya, R.1    Schwert, G.W.2
  • 29
    • 45749124318 scopus 로고    scopus 로고
    • Glutamate decarboxylase from Lactobacillus brevis: activation by ammonium sulfate
    • Hiraga K., Ueno Y., Oda K. Glutamate decarboxylase from Lactobacillus brevis: activation by ammonium sulfate. Biosci Biotechnol Biochem 2008, 72:1299-1306.
    • (2008) Biosci Biotechnol Biochem , vol.72 , pp. 1299-1306
    • Hiraga, K.1    Ueno, Y.2    Oda, K.3
  • 30
    • 70450233413 scopus 로고    scopus 로고
    • Mutation of His465 alters the pH-dependent spectroscopic properties of Escherichia coli glutamate decarboxylase and broadens the range of its activity toward more alkaline pH
    • Pennacchietti E., Lammens T.M., Capitani G., Franssen M.C.R., John R.A., Bossa F., et al. Mutation of His465 alters the pH-dependent spectroscopic properties of Escherichia coli glutamate decarboxylase and broadens the range of its activity toward more alkaline pH. J Biol Chem 2009, 284:31587-31596.
    • (2009) J Biol Chem , vol.284 , pp. 31587-31596
    • Pennacchietti, E.1    Lammens, T.M.2    Capitani, G.3    Franssen, M.C.R.4    John, R.A.5    Bossa, F.6
  • 31
    • 0016161063 scopus 로고
    • PH jump studies of glutamate decarboxylase
    • O'Leary M.H., Brummund W. pH jump studies of glutamate decarboxylase. J Biol Chem 1974, 249:3737-3745.
    • (1974) J Biol Chem , vol.249 , pp. 3737-3745
    • O'Leary, M.H.1    Brummund, W.2
  • 32
    • 70350041751 scopus 로고    scopus 로고
    • The application of glutamic acid α-decarboxylase for the valorization of glutamic acid
    • Lammens T.M., De Biase D., Franssen M.C.R., Scott E.L., Sanders J.P.M. The application of glutamic acid α-decarboxylase for the valorization of glutamic acid. Green Chem 2009, 11:1562-1567.
    • (2009) Green Chem , vol.11 , pp. 1562-1567
    • Lammens, T.M.1    De Biase, D.2    Franssen, M.C.R.3    Scott, E.L.4    Sanders, J.P.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.