메뉴 건너뛰기




Volumn 746, Issue 2, 2012, Pages 151-162

A graphical systems model and tissue-specific functional gene sets to aid transcriptomic analysis of chemical impacts on the female teleost reproductive axis

Author keywords

Endocrine; Fish; Gene set enrichment analysis; Systems biology; Toxicogenomics

Indexed keywords

CYCLIN B1; GLYCOPROTEIN;

EID: 84862794957     PISSN: 13835718     EISSN: 18793592     Source Type: Journal    
DOI: 10.1016/j.mrgentox.2011.12.016     Document Type: Article
Times cited : (19)

References (37)
  • 3
    • 77953684081 scopus 로고    scopus 로고
    • A transcriptomics-based biological framework for studying mechanisms of endocrine disruption in small fish species
    • Wang R.L., Bencic D., Villeneuve D.L., Ankley G.T., Lazorchak J., Edwards S. A transcriptomics-based biological framework for studying mechanisms of endocrine disruption in small fish species. Aquat. Toxicol. 2010, 98:230-244.
    • (2010) Aquat. Toxicol. , vol.98 , pp. 230-244
    • Wang, R.L.1    Bencic, D.2    Villeneuve, D.L.3    Ankley, G.T.4    Lazorchak, J.5    Edwards, S.6
  • 7
    • 69049113953 scopus 로고    scopus 로고
    • Altered gene expression in the brain and ovaries of zebrafish (Danio rerio) exposed to the aromatase inhibitor fadrozole: microarray analysis and hypothesis generation
    • Villeneuve L., Wang R.L., Bencic D.C., Biales A.D., Martinovic D., Lazorchak J.M., Toth G., Ankley G.T. Altered gene expression in the brain and ovaries of zebrafish (Danio rerio) exposed to the aromatase inhibitor fadrozole: microarray analysis and hypothesis generation. Environ. Toxicol. Chem. 2009, 28:1767-1782.
    • (2009) Environ. Toxicol. Chem. , vol.28 , pp. 1767-1782
    • Villeneuve, L.1    Wang, R.L.2    Bencic, D.C.3    Biales, A.D.4    Martinovic, D.5    Lazorchak, J.M.6    Toth, G.7    Ankley, G.T.8
  • 13
    • 23444439817 scopus 로고    scopus 로고
    • Using process diagrams for the graphical representation of biological networks
    • Kitano H., Funahashi A., Matsuoka Y., Oda K. Using process diagrams for the graphical representation of biological networks. Nat. Biotechnol. 2005, 23:961-966.
    • (2005) Nat. Biotechnol. , vol.23 , pp. 961-966
    • Kitano, H.1    Funahashi, A.2    Matsuoka, Y.3    Oda, K.4
  • 18
    • 0037351989 scopus 로고    scopus 로고
    • Genome duplication, a trait shared by 22,000 species of ray-finned fish
    • Taylor J.S., Braasch I., Frickey T., Meyer A., Van de Peer Y. Genome duplication, a trait shared by 22,000 species of ray-finned fish. Genome Res. 2003, 13:382-390.
    • (2003) Genome Res. , vol.13 , pp. 382-390
    • Taylor, J.S.1    Braasch, I.2    Frickey, T.3    Meyer, A.4    Van de Peer, Y.5
  • 20
    • 0037204729 scopus 로고    scopus 로고
    • Ovarian tissue remodeling: role of matrix metalloproteinases and their inhibitors
    • Smith M.F., Ricke W.A., Bakke L.J., Dow M.P., Smith G.W. Ovarian tissue remodeling: role of matrix metalloproteinases and their inhibitors. Mol. Cell. Endocrinol. 2002, 191:45-56.
    • (2002) Mol. Cell. Endocrinol. , vol.191 , pp. 45-56
    • Smith, M.F.1    Ricke, W.A.2    Bakke, L.J.3    Dow, M.P.4    Smith, G.W.5
  • 25
    • 8844271685 scopus 로고    scopus 로고
    • Faster cyclic loess: normalizing RNA arrays via linear models
    • Ballman K.V., Grill D.E., Oberg A.L., Therneau T.M. Faster cyclic loess: normalizing RNA arrays via linear models. Bioinformatics 2004, 20:2778-2786.
    • (2004) Bioinformatics , vol.20 , pp. 2778-2786
    • Ballman, K.V.1    Grill, D.E.2    Oberg, A.L.3    Therneau, T.M.4
  • 26
    • 61449172037 scopus 로고    scopus 로고
    • Systematic Integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang D., Sherman B., Lempicki R., Systematic integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 2009, 4:44-57.
    • (2009) Nat. Protoc. , vol.4 , pp. 44-57
    • Huang, D.1    Sherman, B.2    Lempicki, R.3
  • 28
    • 54049085798 scopus 로고    scopus 로고
    • Zona pellucida glycoproteins
    • Wassarman P.M. Zona pellucida glycoproteins. J. Biol. Chem. 2008, 283:24285-24289.
    • (2008) J. Biol. Chem. , vol.283 , pp. 24285-24289
    • Wassarman, P.M.1
  • 30
    • 0032566955 scopus 로고    scopus 로고
    • The molecular basis of oocyte growth and development
    • Picton H., Briggs D., Gosden R. The molecular basis of oocyte growth and development. Mol. Cell. Endocrinol. 1998, 145:27-37.
    • (1998) Mol. Cell. Endocrinol. , vol.145 , pp. 27-37
    • Picton, H.1    Briggs, D.2    Gosden, R.3
  • 31
    • 60649117394 scopus 로고    scopus 로고
    • Analyses of zebrafish and Xenopus oocyte maturation reveal conserved and diverged features of translational regulation of maternal cyclin B1 mRNA
    • Zhang Y., Sheets M.D. Analyses of zebrafish and Xenopus oocyte maturation reveal conserved and diverged features of translational regulation of maternal cyclin B1 mRNA. BMC Dev. Biol. 2009, 9:7.
    • (2009) BMC Dev. Biol. , vol.9 , pp. 7
    • Zhang, Y.1    Sheets, M.D.2
  • 32
    • 79953221875 scopus 로고    scopus 로고
    • Post-transcriptional and post-translational regulation during mouse oocyte maturation
    • Kang M.K., Han S.J. Post-transcriptional and post-translational regulation during mouse oocyte maturation. BMB Rep. 2011, 44:147-157.
    • (2011) BMB Rep. , vol.44 , pp. 147-157
    • Kang, M.K.1    Han, S.J.2
  • 34
    • 77957977389 scopus 로고    scopus 로고
    • The Aurora kinase inhibitor ZM447439 accelerates first meiosis in mouse oocytes by overriding the spindle assembly checkpoint
    • Lane S.I., Chang H.Y., Jennings P.C., Jones K.T. The Aurora kinase inhibitor ZM447439 accelerates first meiosis in mouse oocytes by overriding the spindle assembly checkpoint. Reproduction 2010, 140:521-530.
    • (2010) Reproduction , vol.140 , pp. 521-530
    • Lane, S.I.1    Chang, H.Y.2    Jennings, P.C.3    Jones, K.T.4
  • 36
    • 9244239171 scopus 로고    scopus 로고
    • Novel expression of gonadotropin subunit genes in oocytes of the gilthead seabream (Sparus aurata)
    • Wong T.T., Zohar Y. Novel expression of gonadotropin subunit genes in oocytes of the gilthead seabream (Sparus aurata). Endocrinology 2004, 145:5210-5220.
    • (2004) Endocrinology , vol.145 , pp. 5210-5220
    • Wong, T.T.1    Zohar, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.