Systems biology of abiotic stress: The elephant and the blind men

Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation

Volumn , Issue , 2010, Pages 485-502

  Fedoroff, Nina V ^a,b  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b SANTA FE INSTITUTE   (United States)

Author keywords

Cytoskeletal restructuring; reactive oxygen species; systemic acquired resistance; systems biology; vesicular trafficking

Indexed keywords

EID: 84862789232     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-90-481-3112-9_22     Document Type: Chapter

References (209)

1. Abel PP, Nelson RS, De B, Hoffmann N, Rogers SG, Fraley RT, Beachy RN (1986) Delay of disease development in transgenic plants that express the tobacco mosaic virus coat protein gene. Science 232:738-744
2. Abu-Abied M, Golomb L, Belausov E, Huang S, Geiger B, Kam Z, Staiger CJ, Sadot E (2006) Identification of plant cytoskeleton-interacting proteins by screening for actin stress fiber association in mammalian fibroblasts. Plant J 48:367-379
3. Ahlfors R, Macioszek V, Rudd J, Brosche M, Schlichting R, Scheel D, Kangasjarvi J (2004) Stress hormone-independent activation and nuclear translocation of mitogen activated protein kinases in Arabidopsis thaliana during ozone exposure. Plant J 40:512-522
4. Albrecht V, Weinl S, Blazevic D, D'Angelo C, Batistic O, Kolukisaoglu U, Bock R, Schulz B, Harter K, Kudla J (2003) The calcium sensor CBL1 integrates plant responses to abiotic stresses. Plant J 36:457-470
5. Allan AC, Fluhr R (1997) Two distinct sources of elicited Reactive Oxygen Species in tobacco epidermal cells. Plant Cell 9:1559-1572
6. Allan AC, Fricker MD, Ward JL, Beale MH, Trewavas AJ (1994) Two transduction pathways mediate rapid effects of abscisic acid in Commelina guard cells. Plant Cell 6:1319-1328
7. Allen GJ, Kwak JM, Chu SP, Llopis J, Tsien RY, Harper JF, Schroeder JI (1999) Cameleon calcium indicator reports cytoplasmic calcium dynamics in Arabidopsis guard cells. Plant J 19:735-747
8. Allen GJ, Chu SP, Harrington CL, Schumacher K, Hoffmann T, Tang YY, Grill E, Schroeder JI (2001) A defined range of guard cell calcium oscillation parameters encodes stomatal movements. Nature 411:1053-1057
9. Anastasiou E, Lenhard M (2007) Growing up to one's standard. Curr Opin Plant Biol 10:63-69
10. Anderson BE, Ward JM, Schroeder JI (1994) Evidence for an extracellular reception site for abscisic acid in Com-melina guard cells. Plant Physiol 104:1177-1183
11. Aon MA, Cortassa S, Gomez Casati DF, Iglesias AA (2000) Effects of stress on cellular infrastructure and metabolic organization in plant cells. Int Rev Cytol 194:239-273
12. Assmann SM, Schwartz A (1992) Synergistic effect of light and fusicoccin on stomatal opening: epidermal peel and patch clamp experiments. Plant Physiol 98:1349-1355
13. Assmann SM, Wang XQ (2001) From milliseconds to millions of years: guard cells and environmental responses. Curr Opin Plant Biol 4:421-428
14. Beard NA, Laver DR, Dulhunty AF (2004) Calsequestrin and the calcium release channel of skeletal and cardiac muscle. Progr Biophys Molec Biol 85:33-69
15. Binet M, Humbert C, Lecourieux D, Vantard M, Pugin A (2001) Disruption of microtubular cytoskeleton induced by cryptogein, an elicitor of Hypersensitive Response in tobacco cells. Plant Physiol 125:564-572
16. 2+ signalling and control of guard-cell volume in stomatal movements. Curr Opin Plant Biol 3:196-204
17. Blatt MR (2000b) Cellular signaling and volume control in stomatal movements in plants. Annu Rev Cell Devel Biol 16:221-241
18. Boevink P, Oparka K, Santa Cruz S, Martin B, Betteridge A, Hawes C (1998) Stacks on tracks: the plant Golgi apparatus traffics on an actin/ER network. Plant J 15:441-447
19. Bolwell GP, Bindschedler LV, Blee KA, Butt VS, Davies DR, Gardner SL, Gerrish C, Minibayeva F (2002) The apoplastic oxidative burst in response to biotic stress in plants: a three-component system. J Exp Botany 53:1367-1376
20. Brandizzi F, Saint-Jore C, Moore I, Hawes C (2003) The relationship between endomembranes and the plant cytoskeleton. Cell Biol Int 27:177-179
21. 2+ signaling. Am J Physiol Cell Physiol 291:C1082-1088
22. Casimiro I, Marchant A, Bhalerao RP, Beeckman T, Dhooge S, Swarup R, Graham N, Inze D, Sandberg G, Casero PJ, Bennett M (2001) Auxin transport promotes Arabidopsis lateral root initiation. Plant Cell 13:843-852
23. Chen YF, Randlett MD, Findell JL, Schaller GE (2002) Localization of the Ethylene Receptor ETR1 to the Endoplasmic Reticulum of Arabidopsis. J Biol Chem 277:19861-19866
24. Cheong YH, Moon BC, Kim JK, Kim CY, Kim MC, Kim IH, Park CY, Kim JC, Park BO, Koo SC, Yoon HW, Chung WS, Lim CO, Lee SY, Cho MJ (2003) BWMK1, a rice mitogen-activated protein kinase, locates in the nucleus and mediates pathogenesis-related gene expression by activation of a transcription factor. Plant Physiol 132:1961-1972
25. Chu Z, Chen H, Zhang Y, Zhang Z, Zheng N, Yin B, Yan H, Zhu L, Zhao X, Yuan M, Zhang X, Xie Q (2007) Knockout of the AtCESA2 gene affects microtubule orientation and causes abnormal cell expansion in Arabidopsis. Plant Physiol 143:213-224
26. Clayton H, Knight MR, Knight H, McAinsh MR, Hethering-ton AM (1999) Dissection of the ozone-induced calcium signature. Plant J 17:575-579
27. Collins NC, Thordal-Christensen H, Lipka V, Bau S, Kom-brink E, Qiu JL, Huckelhoven R, Stein M, Freialdenhoven A, Somerville SC, Schulze-Lefert P (2003) SNARE-protein-mediated disease resistance at the plant cell wall. Nature 425:973-977
28. Coursol S, Fan LM, Le Stunff H, Spiegel S, Gilroy S, Ass-mann SM (2003) Sphingolipid signalling in Arabidopsis guard cells involves heterotrimeric G proteins. Nature 423:651-654
29. D'Angeli S, Altamura MM (2007) Osmotin induces cold protection in olive trees by affecting Programmed Cell Death and cytoskeleton organization. Planta 225:1147-1163
30. daSilva LLP, Snapp EL, Denecke J, Lippincott-Schwartz J, Hawes C, Brandizzi F (2004) Endoplasmic Reticulum export sites and Golgi bodies behave as single mobile secretory units in plant cells. Plant Cell 16:1753-1771
31. DeBolt S, Gutierrez R, Ehrhardt DW, Melo CV, Ross L, Cutler SR, Somerville C, Bonetta D (2007) Morlin, an inhibitor of cortical microtubule dynamics and cellulose synthase movement. Proc Natl Acad Sci USA 104:5854-5859
32. Delledonne M, Xia Y, Dixon RA, Lamb C (1998) Nitric oxide functions as a signal in plant disease resistance. Nature 394:585-588
33. Dharmasiri N, Dharmasiri S, Jones AM, Estelle M (2003) Auxin action in a cell-free system. Curr Biol 13:1418-1422
34. Dharmasiri N, Dharmasiri S, Estelle M (2005) The F-box protein TIR1 is an auxin receptor. Nature 435:441-445
35. Dhonukshe P, Laxalt AM, Goedhart J, Gadella TW, Mun-nik T (2003) Phospholipase D activation correlates with microtubule reorganization in living plant cells. Plant Cell 15:2666-2679
36. Dietz KJ (2003) Redox control, redox signaling and redox homeostasis in plant cells. Int Rev Cytol 228:141-193
37. Dixon DP, Skipsey M, Grundy NM, Edwards R (2005) Stress-induced protein S-glutathionylation in Arabidopsis. Plant Physiol 138:2233-2244
38. Doke N, Miura Y, Sanchez LM, Park HJ, Noritake T, Yosh-ioka H, Kawakita K (1996) The oxidative burst protects plants against pathogen attack: mechanism and role as an emergency signal for plant bio-defence. Gene 179:45-51
39. Dolan L, Okada K (1999) Signaling in cell type specification. Seminars Cell Dev Biol 10:149-156
40. Engelberth J, Alborn HT, Schmelz EA, Tumlinson JH (2004) Airborne signals prime plants against insect herbivore attack. Proc Natl Acad Sci USA 101:1781-1785
41. Eun SO, Lee Y (2000) Stomatal opening by fusicoccin is accompanied by depolymerization of actin filaments in guard cells. Planta 210:1014-1017
42. Fedoroff N (2006) Redox regulatory mechanisms in cellular stress responses. Ann Bot 98:289-300
43. Feng Y, Liu Q, Xue Q (2006) Comparative study of rice and Arabidopsis actin-depolymerizing factors gene families. J Plant Physiol 163:69-79
44. Fiaschi T, Cozzi G, Raugei G, Formigli L, Ramponi G, Chiarugi P (2006) Redox regulation of beta-actin during integrin-mediated cell adhesion. J Biol Chem 281:22983-22991
45. Finkel T (2001) Reactive oxygen species and signal trans-duction. IUBMB Life 52:3-6
46. Fu Y, Gu Y, Zheng Z, Wasteneys G, Yang Z (2005) Arabi-dopsis interdigitating cell growth requires two antagonistic pathways with opposing action on cell morphogenesis. Cell 120:687-700
47. Fukuda M, Hasezawa S, Asai N, Nakajima N, Kondo N (1998) Dynamic organization of microtubules in guard cells of Vicia faba L. with diurnal cycle. Plant Cell Physiol 39:80-86
48. Galatis B, Apostolakos (2004) The role of the cytoskeleton in the morphogenesis and function of stomatal complexes. New Phytol 161:613-639
49. Gao XQ, Li CG, Wei PC, Zhang XY, Chen J, Wang XC (2005) The dynamic changes of tonoplasts in guard cells are important for stomatal movement in Vicia faba. Plant Physiol 139:1207-1216
50. Gechev TS, Van Breusegem F, Stone JM, Denev I, Laloi C (2006) Reactive oxygen species as signals that modulate plant stress responses and programmed cell death. Bioessays 28:1091-1101
51. Gilroy S, Read ND, Trewavas AJ (1990) Elevation of cyto-plasmic calcium by caged calcium or caged inositol tri-phosphate initiates stomatal closure. Nature 346:769-771
52. Giustarini D, Rossi R, Milzani A, Colombo R, Dalle-Donne I (2004) S-glutathionylation: from redox regulation of protein functions to human diseases. J Cellular Molec Med 8:201-212
53. Golz JF (2006) Signalling between the shoot apical meristem and developing lateral organs. Plant Mol Biol 60:889-903
54. Gorbatyuk VY, Nosworthy NJ, Robson SA, Bains NP, Maciejewski MW, Dos Remedios CG, King GF (2006) Mapping the phosphoinositide-binding site on chick cofi-lin explains how PIP2 regulates the cofilin-actin interaction. Mol Cell 24:511-522
55. Grant M, Lamb C (2006) Systemic immunity. Curr Opin Plant Biol 9:414-420
56. Gross P, Julius C, Schmelzer E, Hahlbrock K (1993) Trans-location of cytoplasm and nucleus to fungal penetration sites is associated with depolymerization of microtubules and defence gene activation in infected, cultured parsley cells. EMBO J 12:1735-1744
57. Grun S, Lindermayr C, Sell S, Durner J (2006) Nitric oxide and gene regulation in plants. J Exp Botany 57:507-516
58. Hall RD, Riksen-Bruinsma T, Weyens G, Lefebvre M, Dun-well JM, Krens FA (1996) Stomatal guard cells are totipo-tent. Plant Physiol 112:889-892
59. +-ATPase genes expressed in guard cells of Vicia faba are also expressed throughout the plant. Plant Cell Physiol 37:650-659
60. Heo WD, Inoue T, Park WS, Kim ML, Park BO, Wandless TJ, Meyer T (2006) PI (3, 4, 5)P3 and PI(4, 5)P2 lipids target proteins with polybasic clusters to the plasma membrane. Science 314:1458-1461
61. Hepler PK, Palevitz BA, Lancelle SA, McCauley MM, Lichtscheidl I (1990) Cortical endoplasmic reticulum in plants. J Cell Sci 96:355-373
62. 2+ release channels. Philos Trans R Soc Lond B Biol Sci 360:2237-2246
63. Hilpela P, Vartiainen MK, Lappalainen P (2004) Regulation of the actin cytoskeleton by PI (4, 5)P2 and PI(3, 4, 5)P3. Curr Topics Microbiol Immunol 282:117-163
64. Holweg CL (2007) Living markers for actin block myosin-dependent motility of plant organelles and auxin. Cell Motility Cytoskeleton 64:69-81
65. Homann U (1998) Fusion and fission of plasma-membrane material accomodates for osmotically induced changes in the surface area of guard-cell protoplasts. Planta 206:329-333
66. Homann U, Thiel G (1999) Unitary exocytotic and endocy-totic events in guard-cell protoplasts during osmotically driven volume changes. FEBS Lett. 460:495-499
67. Howe GA, Schilmiller AL (2002) Oxylipin metabolism in response to stress. Curr Opin Plant Biol 5:230-236
68. Huang RF, Wang XC, Lou CH (2000) Cytoskeletal inhibitors suppress the stomatal opening of Vicia faba L. induced by fusicoccin and IAA. Plant Sci 156:65-71
69. Huang S, Gao L, Blanchoin L, Staiger CJ (2006) Het-erodimeric capping protein from Arabidopsis is regulated by phosphatidic acid. Mol Biol Cell 17:1946-1958
70. Hurst AC, Meckel T, Tayefeh S, Thiel G, Homann U (2004) Trafficking of the plant potassium inward rectifier KAT1 in guard cell protoplasts of Vicia faba. Plant J 37: 391-397
71. Hwang JU, Lee Y (2001) Abscisic acid-induced actin reorganization in guard cells of dayflower is mediated by cytosolic calcium levels and by protein kinase and protein phos-phatase activities. Plant Physiol 125:2120-2128
72. +-channel activities in guard cells of Vicia faba L. Plant Physiol 115:335-342
73. Hwang JU, Gu Y, Lee YJ, Yang Z (2005) Oscillatory ROP GTPase activation leads the oscillatory polarized growth of pollen tubes. Mol Biol Cell 16:5385-5399
74. Ikeda S, Yamaoka-Tojo M, Hilenski L, Patrushev NA, Anwar GM, Quinn MT, Ushio-Fukai M (2005) IQGAP1 regulates reactive oxygen species-dependent endothelial cell migration through interacting with Nox2. Arteriosclerosis, Thrombosis, Vascular Biol 25:2295-2300
75. Iriti M, Rabotti G, De Ascensao A, Faoro F (2003) Benzothiadiazole- induced resistance modulates ozone tolerance. J Agric Food Chem 51:4308-4314
76. Jacob T, Ritchie S, Assmann SM, Gilroy S (1999) abscisic acid signal transduction in guard cells is mediated by phospholi-pase D activity. Proc Natl Acad Sci USA 96:12192-12197
77. Joo JH, Wang S, Chen JG, Jones AM, Fedoroff NV (2005) Different signaling and cell death roles of heterotrimeric G protein alpha and beta subunits in the Arabidopsis oxi-dative stress response to ozone. Plant Cell 17:957-970
78. Jung JY, Kim YW, Kwak JM, Hwang JU, Young J, Schroeder JI, Hwang I, Lee Y (2002) Phosphatidylinositol 3-and 4-phosphate are required for normal stomatal movements. Plant Cell 14:2399-2412
79. Kilian J, Whitehead D, Horak J, Wanke D, Weinl S, Batistic O, D'Angelo C, Bornberg-Bauer E, Kudla J, Harter K (2007) The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J 50:347-363
80. Kim M, Hepler PK, Eun SO, Ha KS, Lee Y (1995) Actin filaments in mature guard cells are radially distributed and involved in stomatal movement. Plant Physiol 109:1077-1084
81. +-ATPase by phosphorylation of the C-terminus in stomatal guard cells. EMBO J 18:5548-5558
82. Kinoshita T, Doi M, Suetsugu N, Kagawa T, Wada M, Shi-mazaki K (2001) Phot1 and phot2 mediate blue light regulation of stomatal opening. Nature 414:656-660
83. Knight H, Knight MR (2000) Imaging spatial and cellular characteristics of low temperature calcium signature after cold acclimation in Arabidopsis. J Exp Bot 51:1679-1686
84. Knight H, Knight MR (2001) Abiotic stress signalling pathways: specificity and cross-talk. Trends Plant Sci 6:262-267
85. Knight H, Trewavas AJ, Knight MR (1996) Cold calcium signaling in Arabidopsis involves two cellular pools and a change in calcium signature after acclimation. Plant Cell 8:489-503
86. Knight H, Trewavas AJ, Knight MR (1997) Calcium signalling in Arabidopsis thaliana responding to drought and salinity. Plant J 12:1067-1078
87. Komis G, Quader H, Galatis B, Apostolakos P (2006) Macrotubule-dependent protoplast volume regulation in plasmolysed root-tip cells of Triticum turgidum: involvement of phospholipase D. New Phytol 171:737-750
88. Kubitscheck U, Homann U, Thiel G (2000) Osmotically evoked shrinking of guard-cell protoplasts causes vesicular retrieval of plasma membrane into the cytoplasm. Planta 210: 423-431
89. Kwak JM, Mori IC, Pei ZM, Leonhardt N, Torres MA, Dangl JL, Bloom RE, Bodde S, Jones JD, Schroeder JI (2003) NADPH oxidase AtrbohD and AtrbohF genes function in ROS-dependent ABA signaling in Arabidopsis. EMBO J 22:2623-2633
90. Kwon Y, Hofmann T, Montell C (2007) Integration of phosph-oinositide-and calmodulin-mediated regulation of TRPC6. Mol Cell 25:491-503
91. Lahav M, Abu-Abied M, Belausov E, Schwartz A, Sadot E (2004) Microtubules of guard cells are light sensitive. Plant Cell Physiol 45:573-582
92. Lam E, Kato N, Lawton M (2001) Programmed cell death, mitochondria and the plant hypersensitive response. Nature 411:848-853
93. Lamb D, Dixon RA (1997) The oxidative burst in plant disease resistance. Annu Rev Plant Physiol Plant Mol Biol 48:251-275
94. Lange K, Brandt U (1996) Calcium storage and release properties of F-actin: evidence for the involvement of F-actin in cellular calcium signaling. FEBS Lett 395:137-142
95. 2+ signaling. Critical Rev Euk Gene Expr 16:307-365
96. Laxalt AM, Munnik T (2002) Phospholipid signalling in plant defence. Curr Opin Plant Biol 5:332-338
97. Leckie CP, McAinsh MR, Allen GJ, Sanders D, Hethering-ton AM (1998) Abscisic acid-induced stomatal closure mediated by cyclic ADP-ribose. Proc Natl Acad Sci USA 95:15837-15842
98. Lecourieux D, Mazars C, Pauly N, Ranjeva R, Pugin A (2002) Analysis and effects of cytosolic free calcium increases in response to elicitors in Nicotiana plumbag-inifolia cells. Plant Cell 14:2627-2641
99. Lecourieux D, Ranjeva R, Pugin A (2006) Calcium in plant defence-signalling pathways. New Phytol 171:249-269
100. Lee KH, Piao HL, Kim HY, Choi SM, Jiang F, Hartung W, Hwang I, Kwak JM, Lee IJ, Hwang I (2006) Activation of glucosidase via stress-induced polymerization rapidly increases active pools of abscisic acid. Cell 126:1109-1120
101. Lee YR, Liu B (2004) Cytoskeletal motors in Arabidopsis. Sixty-one kinesins and seventeen myosins. Plant Physiol 136:3877-3883
102. Lemichez E, Wu Y, Sanchez JP, Mettouchi A, Mathur J, Chua NH (2001) Inactivation of AtRac1 by abscisic acid is essential for stomatal closure. Genes Dev 15:1808-1816
103. Leonhardt N, Kwak JM, Robert N, Waner D, Leonhardt G, Schroeder JI (2004) Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive absci-sic acid hypersensitive protein phosphatase 2C mutant. Plant Cell 16:596-615
104. 2+ signals. Proc Natl Acad Sci USA 102:4203-4208
105. 2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response. Cell 79:583-593
106. Leyman B, Geelen D, Quintero FJ, Blatt MR (1999) A tobacco syntaxin with a role in hormonal control of guard cell ion channels. Science 283:537-540
107. Lipka V, Panstruga R (2005) Dynamic cellular responses in plant-microbe interactions. Curr Opin Plant Biol 8: 625-631
108. Lillemeier BF, Pfeiffer JR, Surviladze Z, Wilson BS, Davis MM (2006) Plasma membrane-associated proteins are clustered into islands attached to the cytoskeleton. Proc Natl Acad Sci USA 103:18992-18997
109. Liu X, Yue Y, Li B, Nie Y, Li W, Wu WH, Ma L (2007) A G protein-coupled receptor is a plasma membrane receptor for the plant hormone abscisic acid. Science 315:1712-1716
110. Logemann E, Hahlbrock K (2002) Crosstalk among stress responses in plants: pathogen defense overrides UV protection through an inversely regulated ACE/ACE type of light-responsive gene promoter unit. Proc Natl Acad Sci USA 99:2428-2432
111. 2+ and cell signalling in guard cells. Semin Cell Biol 4:113-122
112. MacRobbie EA (1998) Signal transduction and ion channels in guard cells. Philos Trans R Soc Lond B Biol Sci 353:1475-1488
113. Mahalingam R, Fedoroff N (2003) Stress response, cell death and signalling: the many faces of reactive oxygen species. Physiol Plant 119:56-68
114. Mahalingam R, Shah N, Scrymgeour A, Fedoroff N (2005) Temporal evolution of the Arabidopsis oxidative stress response. Plant Mol Biol 57:709-730
115. Malacombe M, Bader MF, Gasman S (2006) Exocytosis in neuro-endocrine cells: new tasks for actin. Biochem Bio-phys Acta 1763:1175-1183
116. Marcus AI, Moore RC, Cyr RJ (2001) The role of microtu-bules in guard cell function. Plant Physiol 125:387-395
117. 2+-dependent and independent abscisic acid activation of plasma membrane anion channels in guard cells of Nicotiana tabacum. Plant Physiol 143:28-37
118. 2+ signaling systems. Trends Plant Sci 3:32-36
119. 2+ during the response of stomatal guard cells to abscisic acid. Plant Cell 4: 1113-1122
120. McAinsh MR, Webb A, Taylor JE, Hetherington AM (1995) Stimulus-induced oscillations in guard cell cytosolic free calcium. Plant Cell 7:1207-1219
121. McCurdy DW, Kovar DR, Staiger CJ (2001) Actin and actin-binding proteins in higher plants. Protoplasma 215: 89-104
122. Meckel T, Hurst AC, Thiel G, Homann U (2004) Endocy-tosis against high turgor: intact guard cells of Vicia faba constitutively endocytose fluorescently labelled plasma membrane and GFP-tagged K-channel KAT1. Plant J. 39:182-193
123. Meckel T, Hurst AC, Thiel G, Homann U (2005) Guard cells undergo constitutive and pressure-driven membrane turnover. Protoplasma 226:23-29
124. Meckel T, Gall L, Semrau S, Homann U, Thiel G (2007) Guard cells elongate: relationship of volume and surface area during stomatal movement. Biophys J 92:1072-1080
125. Meinhard M, Grill E (2001) Hydrogen peroxide is a regulator of ABI1, a protein phosphatase 2C from Arabidopsis. FEBS Lett 508:443-446
126. Meinhard M, Rodriguez PL, Grill E (2002) The sensitivity of ABI2 to hydrogen peroxide links the abscisic acid-response regulator to redox signalling. Planta 214:775-782
127. Meskiene I, Baudouin E, Schweighofer A, Liwosz A, Jonak C, Rodriguez PL, Jelinek H, Hirt H (2003) Stress-induced protein phosphatase 2C is a negative regulator of a mitogen activated protein kinase. J Biol Chem 278:18945-18952
128. Mishra G, Zhang W, Deng F, Zhao J, Wang X (2006a) A bifurcating pathway directs abscisic acid effects on stomatal closure and opening in Arabidopsis. Science 312(5771):264-266
129. Mishra NS, Tuteja R, Tuteja N (2006b) Signaling through MAP Kinase networks in plants. Arch Biochem Biophys 452:55-68
130. 2+ channels. A signaling mechanism in polar growth, hormone transduction, stresses signaling and hypothetically mechano-transduction. Plant Physiol 135:702-708
131. Morris CE, Homann U (2001) Cell surface area regulation and membrane tension. J Membrane Biol 179:79-102
132. Mou Z, Fan W, Dong X (2003) Inducers of plant systemic acquired resistance regulate NPR1 function through redox changes. Cell 113:935-944
133. Mullineaux P, Ball L, Escobar C, Karpinska B, Creissen G, Karpinski S (2000) Are diverse signalling pathways integrated in the regulation of Arabidopsis antioxidant defense gene expression in response to excess excitation energy? Philos Trans R Soc Lond B Biol Sci 355:1531-1540
134. Munnik T (2001) Phosphatidic acid: an emerging plant lipid second messenger. Trends Plant Sci 6:227-233
135. Nebl T, Oh SW, Luna EJ (2000) Membrane cytoskeleton: PIP(2) pulls the strings. Curr Biol 10:R351-R354
136. Nibau C, Wu HM, Cheung AY (2006) RAC/ROP GTPases: 'hubs' for signal integration and diversification in plants. Trends Plant Sci 11:309-315
137. Orozco-Cardenas M, Narvaez-Vasquez J, Ryan C (2001) Hydrogen peroxide acts as a second messenger for the induction of defense genes in tomato plants in response to wounding, systemin, and methyl jasmonate. Plant Cell 13:179-191
138. Osakabe Y, Maruyama K, Seki M, Satou M, Shinozaki K, Yamaguchi-Shinozaki K (2005) Leucine-rich repeat receptorlike kinase1 is a key membrane-bound regulator of abscisic acid early signaling in Arabidopsis. Plant Cell 17:1105-1119
139. Paget MS, Buttner MJ (2003) Thiol-based regulatory switches. Annu Rev Genetics 37:91-121
140. Pandey S, Assmann SM (2004) The Arabidopsis putative G protein-coupled receptor GCR1 interacts with the G protein a subunit GPA1 and regulates abscisic acid signaling. Plant Cell 16:1616-1632
141. Park KY, Jung JY, Park J, Hwang JU, Kim YW, Hwang I, Lee Y (2003) A role for phosphatidylinositol 3-phosphate in abscisic acid-induced reactive oxygen species generation in guard cells. Plant Physiol 132:92-98
142. Pei ZM, Murata Y, Benning G, Thomine S, Klusener B, Allen GJ, Grill E, Schroeder JI (2000) Calcium channels activated by hydrogen peroxide mediate abscisic acid signalling in guard cells. Nature 406:731-734
143. Penner R, Fleig A (2004) Store-operated calcium entry: a tough nut to CRAC. Sci STKE 2004: pe38
144. Persson C, Sjoblom T, Groen A, Kappert K, Engstrom U, Hellman U, Heldin CH, den Hertog J, Ostman A (2004) Preferential oxidation of the second phosphatase domain of receptor-like PTP-alpha revealed by an antibody against oxidized protein tyrosine phosphatases. Proc Natl Acad Sci USA 101:1886-1891
145. Plieth C (2005) Calcium: just another regulator in the machinery of life? Ann Bot (Lond) 96:1-8
146. Price AH, Taylor A, Ripley SJ, Griffiths A, Trewavas AJ, Knight MR (1994) Oxidative signals in tobacco increase cytosolic calcium. Plant Cell 6:1301-1310
147. Putney JW (2007) Inositol lipids and TRPC channel activation. Biochemical Society symposium: 37-45
148. Razem FA, El-Kereamy A, Abrams SR, Hill RD (2006) The RNA-binding protein FCA is an abscisic acid receptor. Nature 439:290-294
149. Rochon A, Boyle P, Wignes T, Fobert PR, Despres C (2006) The coactivator function of Arabidopsis NPR1 requires the core of its BTB/POZ domain and the oxidation of C-terminal cysteines. Plant Cell 18:3670-3685
150. Roelfsema MR, Hedrich R (2005) In the light of stomatal opening: new insights into the Watergate. New Phytol 167:665-691
151. Sakamoto K, Briggs WR (2002) Cellular and subcellular localization of phototropin 1. Plant Cell 14:1723-1735
152. Samaj J, Baluska F, Hirt H (2004) From signal to cell polarity: mitogen activated protein kinases as sensors and effectors of cytoskeleton dynamicity. J Exp Bot 55:189-198
153. Sandermann H Jr (2000) Active oxygen species as mediators of plant immunity: three case studies. Biol Chem 381:649-653
154. Sanders D, Brownlee C, Harper JF (1999) Communicating with calcium. Plant Cell 11:691-706
155. Schmelzer E (2002) Cell polarization, a crucial process in fungal defence. Trends Plant Sci 7:411-415
156. Schroeder JI, Allen GJ, Hugouvieux V, Kwak JM, Waner D (2001) Guard cell signal transduction. Annu Rev Plant Physiol Plant Mol Biol 52:627-658
157. + channels and stomatal response by abscisic acid: an intracellular locus of phytohormone action. Proc Natl Acad Sci USA 91:4019-4023
158. Scrase-Field SA, Knight MR (2003) Calcium: just a chemical switch? Curr Opin Plant Biol 6:500-506
159. Seki M, Satou M, Sakurai T, Akiyama K, Iida K, Ishida J, Nakajima M, Enju A, Narusaka M, Fujita M, Oono Y, Kamei A, Yamaguchi-Shinozaki K, Shinozaki K (2004) RIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions. J Exp Botany 55:213-223
160. Shen YY, Wang XF, Wu FQ, Du SY, Cao Z, Shang Y, Wang XL, Peng CC, Yu XC, Zhu SY, Fan RC, Xu YH, Zhang DP (2006) The Mg-chelatase H subunit is an abscisic acid receptor. Nature 443:823-826
161. Shoji T, Suzuki K, Abe T, Kaneko Y, Shi H, Zhu JK, Rus A, Hasegawa PM, Hashimoto T (2006) Salt stress affects cortical microtubule organization and helical growth in Arabidopsis. Plant Cell Physiol 47:1158-1168
162. Shope JC, Mott KA (2006) Membrane trafficking and osmotically induced volume changes in guard cells. J Exp Bot 57:4123-4131
163. Shope JC, DeWald DB, Mott KA (2003) Changes in surface area of intact guard cells are correlated with membrane internalization. Plant Physiol 133:1314-1321
164. Sieburth LE, Deyholos MK (2006) Vascular development: the long and winding road. Curr Opin Plant Biol 9:48-54
165. Sitia R, Molteni SN (2004) Stress, protein (mis)folding, and signaling: the redox connection. Sci STKE 2004: pe27
166. Skare P, Karlsson R (2002) Evidence for two interaction regions for phosphatidylinositol(4, 5)-bisphosphate on mammalian profilin I. FEBS Lett 522:119-124
167. Smith LG, Oppenheimer DG (2005) Spatial control of cell expansion by the plant cytoskeleton. Annu Rev Cell Devel Biol 21:271-295
168. Somerville C (2006) Cellulose synthesis in higher plants. Annu Rev Cell Devel Biol 22:53-78
169. Staiger CJ (2000) Signaling to the actin cytoskeleton in plants. Annu Rev Plant Physiol Plant Mol Biol 51:257-288
170. Staxen II, Pical C, Montgomery LT, Gray JE, Hetherington AM, McAinsh MR (1999) abscisic acid induces oscillations in guard-cell cytosolic free calcium that involve phosphoinositide-specific phospholipase C. Proc Natl Acad Sci USA 96:1779-1784
171. Sutter JU, Campanoni P, Blatt MR, Paneque M (2006a) Setting SNAREs in a different wood. Traffic 7:627-638
172. + channel at the plasma membrane. Plant Cell 18:935-954
173. 2+ in tobacco suspension-culture cells. Plant Physiol 113:587-594
174. Takemiya A, Kinoshita T, Asanuma M, Shimazaki K (2006) Protein phosphatase 1 positively regulates stomatal opening in response to blue light in Vicia faba. Proc Natl Acad Sci USA 103:13549-13554
175. Takemoto D, Hardham AR (2004) The cytoskeleton as a regulator and target of biotic interactions in plants. Plant Physiol 136:3864-3876
176. Tall EG, Spector I, Pentyala SN, Bitter I, Rebecchi MJ (2000) Dynamics of phosphatidylinositol 4, 5-bisphos-phate in actin-rich structures. Curr Biol 10:743-746
177. Testerink C, Dekker HL, Lim ZY, Johns MK, Holmes AB, Koster CG, Ktistakis N, Munnik T (2004) Isolation and identification of phosphatidic acid targets from plants. Plant J 39:527-536
178. Toker A (1998) The synthesis and cellular roles of phos-phatidylinositol 4, 5-bisphosphate. Curr Opin Cell Biol 10:254-261
179. Torres MA, Dangl JL (2005) Functions of the respiratory burst oxidase in biotic interactions, abiotic stress and development. Curr Opin Plant Biol 8:397-403
180. 3-treated Arabidopsis plants. Plant Cell Environ 29:1686-1702
181. Trewavas A, Gilroy S (1991) Signal transduction in plant cells. Trends Genet 7:356-361
182. Trewavas A, Knight M (1994) Mechanical signalling, calcium and plant form. Plant Mol Biol 265:1329-1341
183. Ulm R, Revenkova E, di Sansebastiano GP, Bechtold N, Paszkowski J (2001) Mitogen activated protein kinase phosphatase is required for genotoxic stress relief in Ara-bidopsis. Genes Dev 15:699-709
184. Ulm R, Ichimura K, Mizoguchi T, Peck SC, Zhu T, Wang X, Shinozaki K, Paszkowski J (2002) Distinct regulation of salinity and genotoxic stress responses by Arabidopsis MAP kinase phosphatase 1. EMBO J 21:6483-6493
185. van Hulten M, Pelser M, van Loon LC, Pieterse CM, Ton J (2006) Costs and benefits of priming for defense in Arabi-dopsis. Proc Natl Acad Sci USA 103:5602-5607
186. 2 sensing. New Phytol 165:665-682
187. Vermeer JE, van Leeuwen W, Tobena-Santamaria R, Laxalt AM, Jones DR, Divecha N, Gadella TW Jr, Munnik T (2006) Visualization of PtdIns3P dynamics in living plant cells. Plant J 47:687-700
188. Volkmann D, Mori T, Tirlapur UK, Konig K, Fujiwara T, Ken-drick-Jones J, Baluska F (2003) Unconventional myosins of the plant-specific class VIII: endocytosis, cytokinesis, plasmodesmata/pit-fields and cell-to-cell coupling. Cell Biol Int 27:289-291
189. Wang D, Weaver ND, Kesarwani M, Dong X (2005) Induction of protein secretory pathway is required for systemic acquired resistance. Science 308:1036-1040
190. Wang J, Tekle E, Oubrahim H, Mieyal JJ, Stadtman ER, Chock PB (2003) Stable and controllable RNA interference: Investigating the physiological function of glutath-ionylated actin. Proc Natl Acad Sci USA 100:5103-5106
191. Wang X (2005) Regulatory functions of phospholipase D and phosphatidic acid in plant growth, development, and stress responses. Plant Physiol 139:566-573
192. Wang X (2006) Phospholipid-derived signaling in plant response to temperature and water stresses. Genet Eng 27:57-66
193. Wang XQ, Ullah H, Jones AM, Assmann SM (2001a) G protein regulation of ion channels and abscisic acid signaling in Arabidopsis guard cells. Science 292:2070-2072
194. Wang ZY, Seto H, Fujioka S, Yoshida S, Chory J (2001b) BRI1 is a critical component of a plasma-membrane receptor for plant steroids. Nature 410:380-383
195. Wick P, Gansel X, Oulevey C, Page V, Studer I, Durst M, Sticher L (2003) The expression of the t-SNARE AtSNAP33 is induced by pathogens and mechanical stimulation. Plant Physiol 132:343-351
196. Wiermer M, Feys BJ, Parker JE (2005) Plant immunity: the EDS1 regulatory node. Curr Opin Plant Biol 8:383-389
197. Willemsen V, Scheres B (2004) Mechanisms of pattern formation in plant embryogenesis. Annu Rev Genetics 38:587-614
198. Williams ME, Torabinejad J, Cohick E, Parker K, Drake EJ, Thompson JE, Horter M, Dewald DB (2005) Mutations in the Arabidopsis phosphoinositide phosphatase gene SAC9 lead to overaccumulation of PtdIns(4, 5)P2 and constitutive expression of the stress-response pathway. Plant Physiol 138:686-700
199. Wood NT, Allan AC, Haley A, Viry-Moussaid M, Trewa-vas AJ (2000) The characterization of differential calcium signalling in tobacco guard cells. Plant J 24:335-344
200. Wood NT, Haley A, Viry-Moussaid M, Johnson CH, van Der Luit AH, Trewavas AJ (2001) The calcium rhythms of different cell types oscillate with different circadian phases. Plant Physiol 125:787-796
201. Wu Y, Kuzma J, Marechal E, Graeff R, Lee HC, Foster R, Chua NH (1997) Abscisic acid signaling through cyclic ADP-ribose in plants. Science 278:2126-2130
202. Xiao Y, Chen Y, Huang R, Chen J, Wang XC (2004) Depo-lymerization of actin cytoskeleton is involved in stomatal closure-induced by extracellular calmodulin in Arabidop-sis. Sci China Life Sci 47:454-460
203. Xiong TC, Bourque S, Lecourieux D, Amelot N, Grat S, Briere C, Mazars C, Pugin A, Ranjeva R (2006) Calcium signaling in plant cell organelles delimited by a double membrane. Biochim Biophys Acta 1763:1209-1215
204. Xu D, Rovira II, Finkel T (2002) Oxidants painting the cysteine chapel: redox regulation of PTPs. Dev Cell 2:251-252
205. Xu J, Hofhuis H, Heidstra R, Sauer M, Friml J, Scheres B (2006) A molecular framework for plant regeneration. Science 311:385-388
206. Yuan HY, Yao LL, Jia ZQ, Li Y, Li YZ (2006) Verticillium dahliae toxin induced alterations of cytoskeletons and nucleoli in Arabidopsis thaliana suspension cells. Proto-plasma 229:75-82
207. Zalejski C, Zhang Z, Quettier AL, Maldiney R, Bonnet M, Brault M, Demandre C, Miginiac E, Rona JP, Sotta B, Jeannette E (2005) Diacylglycerol pyrophosphate is a second messenger of abscisic acid signaling in Arabidopsis thaliana suspension cells. Plant J 42:145-152
208. Zhang X, Zhang L, Dong F, Gao J, Galbraith DW, Song CP (2001) Hydrogen peroxide is involved in abscisic acid-induced stomatal closure in Vicia faba. Plant Physiol 126:1438-1448
209. Zhu J, Fu X, Koo YD, Zhu JK, Jenney FE Jr, Adams MW, Zhu Y, Shi H, Yun DJ, Hasegawa PM, Bressan RA (2007) An enhancer mutant of Arabidopsis salt overly sensitive 3 mediates both ion homeostasis and the oxidative stress response. Mol Cell Biol 14:5214-5224