-
1
-
-
0003416686
-
Evolution of sex determining mechanisms
-
Menlo Park, CA.: Benjamin Cummings
-
Bull JJ. Evolution of sex determining mechanisms. 1983, Menlo Park, CA.: Benjamin Cummings.
-
(1983)
-
-
Bull, J.J.1
-
2
-
-
0034731008
-
The degeneration of Y chromosomes
-
10.1098/rstb.2000.0717, 1692900, 11127901
-
Charlesworth B, Charlesworth D. The degeneration of Y chromosomes. Philos Trans R Soc Lond B Biol Sci 2000, 355(1403):1563-1572. 10.1098/rstb.2000.0717, 1692900, 11127901.
-
(2000)
Philos Trans R Soc Lond B Biol Sci
, vol.355
, Issue.1403
, pp. 1563-1572
-
-
Charlesworth, B.1
Charlesworth, D.2
-
3
-
-
0037967242
-
The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes
-
10.1038/nature01722, 12815422
-
Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, Brown LG, Repping S, Pyntikova T, Ali J, Bieri T, et al. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. Nature 2003, 423(6942):825-U822. 10.1038/nature01722, 12815422.
-
(2003)
Nature
, vol.423
, Issue.6942
-
-
Skaletsky, H.1
Kuroda-Kawaguchi, T.2
Minx, P.J.3
Cordum, H.S.4
Hillier, L.5
Brown, L.G.6
Repping, S.7
Pyntikova, T.8
Ali, J.9
Bieri, T.10
-
4
-
-
43249121975
-
The multiple sex chromosomes of platypus and echidna are not completely identical and several share homology with the avian Z
-
Rens W, O'Brien P, Grutzner F, Clarke O, Graphodatskaya D, Tsend-Ayush E, Trifonov V, Skelton H, Wallis M, Johnston S, et al. The multiple sex chromosomes of platypus and echidna are not completely identical and several share homology with the avian Z. Genome Biol 2007, 8(11):R243.s.
-
(2007)
Genome Biol
, vol.8
, Issue.11
-
-
Rens, W.1
O'Brien, P.2
Grutzner, F.3
Clarke, O.4
Graphodatskaya, D.5
Tsend-Ayush, E.6
Trifonov, V.7
Skelton, H.8
Wallis, M.9
Johnston, S.10
-
5
-
-
40849105564
-
Genomic degradation of a young Y chromosome in Drosophila miranda
-
10.1186/gb-2008-9-2-r30, 2374705, 18269752
-
Bachtrog D, Hom E, Wong KM, Maside X, de Jong P. Genomic degradation of a young Y chromosome in Drosophila miranda. Genome Biol 2008, 9(2):R30. 10.1186/gb-2008-9-2-r30, 2374705, 18269752.
-
(2008)
Genome Biol
, vol.9
, Issue.2
-
-
Bachtrog, D.1
Hom, E.2
Wong, K.M.3
Maside, X.4
de Jong, P.5
-
6
-
-
0026736836
-
Degenerating Y chromosome of Drosophila miranda: a trap for retrotransposons
-
10.1073/pnas.89.16.7591, 49756, 1323846
-
Steinemann M, Steinemann S. Degenerating Y chromosome of Drosophila miranda: a trap for retrotransposons. Proc Natl Acad Sci USA 1992, 89(16):7591-7595. 10.1073/pnas.89.16.7591, 49756, 1323846.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, Issue.16
, pp. 7591-7595
-
-
Steinemann, M.1
Steinemann, S.2
-
7
-
-
79957785163
-
Fusions of Muller's elements during the chromosome evolution of Drosophila albomicans
-
Chang TP, Tsai TH, Chang HY. Fusions of Muller's elements during the chromosome evolution of Drosophila albomicans. Zool Stud 2008, 47(5):574-584.
-
(2008)
Zool Stud
, vol.47
, Issue.5
, pp. 574-584
-
-
Chang, T.P.1
Tsai, T.H.2
Chang, H.Y.3
-
8
-
-
0026039149
-
Karyotype differentiation among members of the immigrans species group of Drosophila
-
10.1007/BF00058531, 2026329
-
Rao PM, Ranganath HA. Karyotype differentiation among members of the immigrans species group of Drosophila. Genetica 1991, 83(2):145-152. 10.1007/BF00058531, 2026329.
-
(1991)
Genetica
, vol.83
, Issue.2
, pp. 145-152
-
-
Rao, P.M.1
Ranganath, H.A.2
-
9
-
-
33749428115
-
The speciation history of the Drosophila nasuta complex
-
10.1017/S0016672306008330, 17014741
-
Bachtrog D. The speciation history of the Drosophila nasuta complex. Genet Res 2006, 88(1):13-26. 10.1017/S0016672306008330, 17014741.
-
(2006)
Genet Res
, vol.88
, Issue.1
, pp. 13-26
-
-
Bachtrog, D.1
-
10
-
-
0026355198
-
Sex chromosome evolution: platypus gene mapping suggests that part of the human X chromosome was originally autosomal
-
10.1073/pnas.88.24.11256, 53113, 1763040
-
Watson J, Spencer J, Riggs A, Graves J. Sex chromosome evolution: platypus gene mapping suggests that part of the human X chromosome was originally autosomal. Proc Natl Acad Sci USA 1991, 88(24):11256. 10.1073/pnas.88.24.11256, 53113, 1763040.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, Issue.24
, pp. 11256
-
-
Watson, J.1
Spencer, J.2
Riggs, A.3
Graves, J.4
-
11
-
-
0001221764
-
Crossing over in males of higher Diptera (Brachycera)
-
Gethmann RC. Crossing over in males of higher Diptera (Brachycera). J Hered 1988, 79(5):344-350.
-
(1988)
J Hered
, vol.79
, Issue.5
, pp. 344-350
-
-
Gethmann, R.C.1
-
12
-
-
0037149526
-
Reduced adaptation of a non-recombining neo-Y chromosome
-
10.1038/416323a, 11907578
-
Bachtrog D, Charlesworth B. Reduced adaptation of a non-recombining neo-Y chromosome. Nature 2002, 416(6878):323. 10.1038/416323a, 11907578.
-
(2002)
Nature
, vol.416
, Issue.6878
, pp. 323
-
-
Bachtrog, D.1
Charlesworth, B.2
-
13
-
-
47249141386
-
Neo-sex chromosomes in the black muntjac recapitulate incipient evolution of mammalian sex chromosomes
-
10.1186/gb-2008-9-6-r98, 2481430, 18554412
-
Zhou Q, Wang J, Huang L, Nie WH, Wang JH, Liu Y, Zhao XY, Yang FT, Wang W. Neo-sex chromosomes in the black muntjac recapitulate incipient evolution of mammalian sex chromosomes. Genome Biol 2008, 9(6):R98. 10.1186/gb-2008-9-6-r98, 2481430, 18554412.
-
(2008)
Genome Biol
, vol.9
, Issue.6
-
-
Zhou, Q.1
Wang, J.2
Huang, L.3
Nie, W.H.4
Wang, J.H.5
Liu, Y.6
Zhao, X.Y.7
Yang, F.T.8
Wang, W.9
-
14
-
-
0034728446
-
B-chromosome evolution
-
10.1098/rstb.2000.0556, 1692730, 10724453
-
Camacho JP, Sharbel TF, Beukeboom LW. B-chromosome evolution. Philos Trans R Soc Lond B Biol Sci 2000, 355(1394):163-178. 10.1098/rstb.2000.0556, 1692730, 10724453.
-
(2000)
Philos Trans R Soc Lond B Biol Sci
, vol.355
, Issue.1394
, pp. 163-178
-
-
Camacho, J.P.1
Sharbel, T.F.2
Beukeboom, L.W.3
-
15
-
-
0036888984
-
Origin and evolution of the Drosophila Y chromosome
-
10.1016/S0959-437X(02)00356-8, 12433579
-
Carvalho AB. Origin and evolution of the Drosophila Y chromosome. Curr Opin Genet Dev 2002, 12(6):664-668. 10.1016/S0959-437X(02)00356-8, 12433579.
-
(2002)
Curr Opin Genet Dev
, vol.12
, Issue.6
, pp. 664-668
-
-
Carvalho, A.B.1
-
16
-
-
70149110707
-
The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion
-
10.1371/journal.pgen.1000618, 2725324, 19714214
-
Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S, et al. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. PLoS Genet 2009, 5(8):e1000618. 10.1371/journal.pgen.1000618, 2725324, 19714214.
-
(2009)
PLoS Genet
, vol.5
, Issue.8
-
-
Coleman, J.J.1
Rounsley, S.D.2
Rodriguez-Carres, M.3
Kuo, A.4
Wasmann, C.C.5
Grimwood, J.6
Schmutz, J.7
Taga, M.8
White, G.J.9
Zhou, S.10
-
17
-
-
80052327146
-
B Chromosomes Have a Functional Effect on Female Sex Determination in Lake Victoria Cichlid Fishes
-
10.1371/journal.pgen.1002203, 3158035, 21876673
-
Yoshida K, Terai Y, Mizoiri S, Aibara M, Nishihara H, Watanabe M, Kuroiwa A, Hirai H, Hirai Y, Matsuda Y, et al. B Chromosomes Have a Functional Effect on Female Sex Determination in Lake Victoria Cichlid Fishes. PLoS Genet 2011, 7(8):e1002203. 10.1371/journal.pgen.1002203, 3158035, 21876673.
-
(2011)
PLoS Genet
, vol.7
, Issue.8
-
-
Yoshida, K.1
Terai, Y.2
Mizoiri, S.3
Aibara, M.4
Nishihara, H.5
Watanabe, M.6
Kuroiwa, A.7
Hirai, H.8
Hirai, Y.9
Matsuda, Y.10
-
18
-
-
0033649207
-
The effect of B chromosome on the reproduction of Drosophila albomicans
-
He LP, Ling FY, Zheng XZ, Wang W, Kuang RP. The effect of B chromosome on the reproduction of Drosophila albomicans. Yi Chuan Xue Bao 2000, 27(2):114-120.
-
(2000)
Yi Chuan Xue Bao
, vol.27
, Issue.2
, pp. 114-120
-
-
He, L.P.1
Ling, F.Y.2
Zheng, X.Z.3
Wang, W.4
Kuang, R.P.5
-
19
-
-
34247858455
-
The study of B chromosomes in Drosophila albomicans 1: the number and frequency of Bs in Kunming population
-
Ling FY, Osamu K. The study of B chromosomes in Drosophila albomicans 1: the number and frequency of Bs in Kunming population. Zool Res 1991, 12:93-98.
-
(1991)
Zool Res
, vol.12
, pp. 93-98
-
-
Ling, F.Y.1
Osamu, K.2
-
20
-
-
52049124740
-
Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes
-
10.1534/genetics.107.086108, 2475759, 18622036
-
Bhutkar A, Schaeffer SW, Russo SM, Xu M, Smith TF, Gelbart WM. Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes. Genetics 2008, 179(3):1657-1680. 10.1534/genetics.107.086108, 2475759, 18622036.
-
(2008)
Genetics
, vol.179
, Issue.3
, pp. 1657-1680
-
-
Bhutkar, A.1
Schaeffer, S.W.2
Russo, S.M.3
Xu, M.4
Smith, T.F.5
Gelbart, W.M.6
-
21
-
-
47149117454
-
Evolution of genes and genomes on the Drosophila phylogeny
-
10.1038/nature06341, 17994087
-
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature 2007, 450(7167):203-218. 10.1038/nature06341, 17994087.
-
(2007)
Nature
, vol.450
, Issue.7167
, pp. 203-218
-
-
Clark, A.G.1
Eisen, M.B.2
Smith, D.R.3
Bergman, C.M.4
Oliver, B.5
Markow, T.A.6
Kaufman, T.C.7
Kellis, M.8
Gelbart, W.9
Iyer, V.N.10
-
22
-
-
0036743513
-
Testing models of selection and demography in Drosophila simulans
-
1462246, 12242234
-
Wall JD, Andolfatto P, Przeworski M. Testing models of selection and demography in Drosophila simulans. Genetics 2002, 162(1):203-216. 1462246, 12242234.
-
(2002)
Genetics
, vol.162
, Issue.1
, pp. 203-216
-
-
Wall, J.D.1
Andolfatto, P.2
Przeworski, M.3
-
23
-
-
65949109041
-
Accelerated adaptive evolution on a newly formed X chromosome
-
10.1371/journal.pbio.1000082, 2672600, 19402745
-
Bachtrog D, Jensen JD, Zhang Z. Accelerated adaptive evolution on a newly formed X chromosome. PLoS Biol 2009, 7(4):e82. 10.1371/journal.pbio.1000082, 2672600, 19402745.
-
(2009)
PLoS Biol
, vol.7
, Issue.4
-
-
Bachtrog, D.1
Jensen, J.D.2
Zhang, Z.3
-
24
-
-
0020328644
-
Inversion polymorphism in Southeast Asian populations of the Drosophila nasuta subgroup
-
Clyde M. Inversion polymorphism in Southeast Asian populations of the Drosophila nasuta subgroup. Genetica 1982, 58(3):161-175.
-
(1982)
Genetica
, vol.58
, Issue.3
, pp. 161-175
-
-
Clyde, M.1
-
25
-
-
84996405748
-
The persistence of some recessive lethal genes in natural populations of Drosophila melanogaster
-
Oshima C, Watanabe T. The persistence of some recessive lethal genes in natural populations of Drosophila melanogaster. IV Proc Japan Acad 1964, 40(2):125-130.
-
(1964)
IV Proc Japan Acad
, vol.40
, Issue.2
, pp. 125-130
-
-
Oshima, C.1
Watanabe, T.2
-
26
-
-
0029808078
-
The dosage compensation system of Drosophila is co-opted by newly evolved X chromosomes
-
10.1038/383160a0, 8774878
-
Marin I, Franke A, Bashaw GJ, Baker BS. The dosage compensation system of Drosophila is co-opted by newly evolved X chromosomes. Nature 1996, 383(6596):160-163. 10.1038/383160a0, 8774878.
-
(1996)
Nature
, vol.383
, Issue.6596
, pp. 160-163
-
-
Marin, I.1
Franke, A.2
Bashaw, G.J.3
Baker, B.S.4
-
27
-
-
52049087775
-
The temporal dynamics of processes underlying Y chromosome degeneration
-
10.1534/genetics.107.084012, 2475751, 18562655
-
Bachtrog D. The temporal dynamics of processes underlying Y chromosome degeneration. Genetics 2008, 179(3):1513-1525. 10.1534/genetics.107.084012, 2475751, 18562655.
-
(2008)
Genetics
, vol.179
, Issue.3
, pp. 1513-1525
-
-
Bachtrog, D.1
-
28
-
-
77955275027
-
Validation of rearrangement break points identified by paired-end sequencing in natural populations of Drosophila melanogaster
-
10.1093/gbe/evq001, 2839345, 20333226
-
Cridland JM, Thornton KR. Validation of rearrangement break points identified by paired-end sequencing in natural populations of Drosophila melanogaster. Genome Biol Evol 2010, 2:83-101. 10.1093/gbe/evq001, 2839345, 20333226.
-
(2010)
Genome Biol Evol
, vol.2
, pp. 83-101
-
-
Cridland, J.M.1
Thornton, K.R.2
-
29
-
-
46249105777
-
Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster
-
10.1126/science.1158078, 18535209
-
Emerson JJ, Cardoso-Moreira M, Borevitz JO, Long M. Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster. Science 2008, 320(5883):1629-1631. 10.1126/science.1158078, 18535209.
-
(2008)
Science
, vol.320
, Issue.5883
, pp. 1629-1631
-
-
Emerson, J.J.1
Cardoso-Moreira, M.2
Borevitz, J.O.3
Long, M.4
-
30
-
-
0037318262
-
Sequence analysis of a functional Drosophila centromere
-
10.1101/gr.681703, 420369, 12566396
-
Sun X, Le HD, Wahlstrom JM, Karpen GH. Sequence analysis of a functional Drosophila centromere. Genome Res 2003, 13(2):182-194. 10.1101/gr.681703, 420369, 12566396.
-
(2003)
Genome Res
, vol.13
, Issue.2
, pp. 182-194
-
-
Sun, X.1
Le, H.D.2
Wahlstrom, J.M.3
Karpen, G.H.4
-
31
-
-
0035839066
-
The centromere paradox: stable inheritance with rapidly evolving DNA
-
10.1126/science.1062939, 11498581
-
Henikoff S, Ahmad K, Malik HS. The centromere paradox: stable inheritance with rapidly evolving DNA. Science 2001, 293(5532):1098-1102. 10.1126/science.1062939, 11498581.
-
(2001)
Science
, vol.293
, Issue.5532
, pp. 1098-1102
-
-
Henikoff, S.1
Ahmad, K.2
Malik, H.S.3
-
32
-
-
57049177560
-
Comparative sequence analyses reveal sites of ancestral chromosomal fusions in the Indian muntjac genome
-
10.1186/gb-2008-9-10-r155, 2760882, 18957082
-
Tsipouri V, Schueler MG, Hu S, Dutra A, Pak E, Riethman H, Green ED. Comparative sequence analyses reveal sites of ancestral chromosomal fusions in the Indian muntjac genome. Genome Biol 2008, 9(10):R155. 10.1186/gb-2008-9-10-r155, 2760882, 18957082.
-
(2008)
Genome Biol
, vol.9
, Issue.10
-
-
Tsipouri, V.1
Schueler, M.G.2
Hu, S.3
Dutra, A.4
Pak, E.5
Riethman, H.6
Green, E.D.7
-
33
-
-
0344326349
-
Stepwise chromosome evolution in Drosophila albomicans
-
10.1038/sj.hdy.6885470, 10447701
-
Yu YC, Lin FJ, Chang HY. Stepwise chromosome evolution in Drosophila albomicans. Heredity 1999, 83:39-45. 10.1038/sj.hdy.6885470, 10447701.
-
(1999)
Heredity
, vol.83
, pp. 39-45
-
-
Yu, Y.C.1
Lin, F.J.2
Chang, H.Y.3
-
34
-
-
0023659131
-
The structure of sister minichromosome DNA before anaphase in Saccharomyces cerevisiae
-
10.1126/science.3317838, 3317838
-
Koshland D, Hartwell L. The structure of sister minichromosome DNA before anaphase in Saccharomyces cerevisiae. Science 1987, 238(4834):1713-1716. 10.1126/science.3317838, 3317838.
-
(1987)
Science
, vol.238
, Issue.4834
, pp. 1713-1716
-
-
Koshland, D.1
Hartwell, L.2
-
35
-
-
0040033735
-
Karyotype polymorphism in Drosophila albomicans
-
Hatsumi M, Baimai V, Traipakvasin A, Karp A, Steele S, Parmar S, Jones M, Shewry P, Breiman A, Lefort-Buson M. Karyotype polymorphism in Drosophila albomicans. Genome 1987, 29(3):395-400.
-
(1987)
Genome
, vol.29
, Issue.3
, pp. 395-400
-
-
Hatsumi, M.1
Baimai, V.2
Traipakvasin, A.3
Karp, A.4
Steele, S.5
Parmar, S.6
Jones, M.7
Shewry, P.8
Breiman, A.9
Lefort-Buson, M.10
-
36
-
-
0015328565
-
Cell lines derived from late embryonic stages of Drosophila melanogaster
-
Schneider I. Cell lines derived from late embryonic stages of Drosophila melanogaster. J Embryol Exp Morphol 1972, 27(2):353-365.
-
(1972)
J Embryol Exp Morphol
, vol.27
, Issue.2
, pp. 353-365
-
-
Schneider, I.1
-
37
-
-
75649124547
-
De novo assembly of human genomes with massively parallel short read sequencing
-
10.1101/gr.097261.109, 2813482, 20019144
-
Li R, Zhu H, Ruan J, Qian W, Fang X, Shi Z, Li Y, Li S, Shan G, Kristiansen K, et al. De novo assembly of human genomes with massively parallel short read sequencing. Genome Res 2010, 20(2):265-272. 10.1101/gr.097261.109, 2813482, 20019144.
-
(2010)
Genome Res
, vol.20
, Issue.2
, pp. 265-272
-
-
Li, R.1
Zhu, H.2
Ruan, J.3
Qian, W.4
Fang, X.5
Shi, Z.6
Li, Y.7
Li, S.8
Shan, G.9
Kristiansen, K.10
-
38
-
-
61449104864
-
GenBlastA: enabling BLAST to identify homologous gene sequences
-
2612959, 18838612
-
She R, Chu JS, Wang K, Pei J, Chen N. GenBlastA: enabling BLAST to identify homologous gene sequences. Genome Res 2009, 19(1):143-149. 2612959, 18838612.
-
(2009)
Genome Res
, vol.19
, Issue.1
, pp. 143-149
-
-
She, R.1
Chu, J.S.2
Wang, K.3
Pei, J.4
Chen, N.5
-
39
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215(3):403-410.
-
(1990)
J Mol Biol
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
40
-
-
2442713832
-
GeneWise and Genomewise
-
10.1101/gr.1865504, 479130, 15123596
-
Birney E, Clamp M, Durbin R. GeneWise and Genomewise. Genome Res 2004, 14(5):988-995. 10.1101/gr.1865504, 479130, 15123596.
-
(2004)
Genome Res
, vol.14
, Issue.5
, pp. 988-995
-
-
Birney, E.1
Clamp, M.2
Durbin, R.3
-
41
-
-
2942544417
-
Gene finding in novel genomes
-
Korf I. Gene finding in novel genomes. BMC Bioinforma 2004, 5:59.
-
(2004)
BMC Bioinforma
, vol.5
, pp. 59
-
-
Korf, I.1
-
42
-
-
0026647310
-
Prediction of gene structure
-
10.1016/0022-2836(92)90130-C, 1619647
-
Guigo R, Knudsen S, Drake N, Smith T. Prediction of gene structure. J Mol Biol 1992, 226(1):141-157. 10.1016/0022-2836(92)90130-C, 1619647.
-
(1992)
J Mol Biol
, vol.226
, Issue.1
, pp. 141-157
-
-
Guigo, R.1
Knudsen, S.2
Drake, N.3
Smith, T.4
-
43
-
-
33750460281
-
Insights into social insects from the genome of the honeybee Apis mellifera
-
10.1038/nature05260, 2048586, 17073008, The Honeybee Genome Sequencing C
-
The Honeybee Genome Sequencing C Insights into social insects from the genome of the honeybee Apis mellifera. Nature 2006, 443(7114):931-949. 10.1038/nature05260, 2048586, 17073008, The Honeybee Genome Sequencing C.
-
(2006)
Nature
, vol.443
, Issue.7114
, pp. 931-949
-
-
-
44
-
-
15244363491
-
The DNA sequence of the human X chromosome
-
10.1038/nature03440, 2665286, 15772651
-
Ross MT, Grafham DV, Coffey AJ, Scherer S, McLay K, Muzny D, Platzer M, Howell GR, Burrows C, Bird CP, et al. The DNA sequence of the human X chromosome. Nature 2005, 434(7031):325-337. 10.1038/nature03440, 2665286, 15772651.
-
(2005)
Nature
, vol.434
, Issue.7031
, pp. 325-337
-
-
Ross, M.T.1
Grafham, D.V.2
Coffey, A.J.3
Scherer, S.4
McLay, K.5
Muzny, D.6
Platzer, M.7
Howell, G.R.8
Burrows, C.9
Bird, C.P.10
-
45
-
-
0034284437
-
Repbase update: a database and an electronic journal of repetitive elements
-
10.1016/S0168-9525(00)02093-X, 10973072
-
Jurka J. Repbase update: a database and an electronic journal of repetitive elements. Trends Genet 2000, 16(9):418-420. 10.1016/S0168-9525(00)02093-X, 10973072.
-
(2000)
Trends Genet
, vol.16
, Issue.9
, pp. 418-420
-
-
Jurka, J.1
-
46
-
-
0033555906
-
Tandem repeats finder: a program to analyze DNA sequences
-
10.1093/nar/27.2.573, 148217, 9862982
-
Benson G. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res 1999, 27(2):573-580. 10.1093/nar/27.2.573, 148217, 9862982.
-
(1999)
Nucleic Acids Res
, vol.27
, Issue.2
, pp. 573-580
-
-
Benson, G.1
-
47
-
-
52049125422
-
Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps
-
10.1534/genetics.107.086074, 2475758, 18622037
-
Schaeffer SW, Bhutkar A, McAllister BF, Matsuda M, Matzkin LM, O'Grady PM, Rohde C, Valente VL, Aguade M, Anderson WW, et al. Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps. Genetics 2008, 179(3):1601-1655. 10.1534/genetics.107.086074, 2475758, 18622037.
-
(2008)
Genetics
, vol.179
, Issue.3
, pp. 1601-1655
-
-
Schaeffer, S.W.1
Bhutkar, A.2
McAllister, B.F.3
Matsuda, M.4
Matzkin, L.M.5
O'Grady, P.M.6
Rohde, C.7
Valente, V.L.8
Aguade, M.9
Anderson, W.W.10
-
48
-
-
40049104732
-
SOAP: short oligonucleotide alignment program
-
10.1093/bioinformatics/btn025, 18227114
-
Li R, Li Y, Kristiansen K, Wang J. SOAP: short oligonucleotide alignment program. Bioinformatics 2008, 24(5):713-714. 10.1093/bioinformatics/btn025, 18227114.
-
(2008)
Bioinformatics
, vol.24
, Issue.5
, pp. 713-714
-
-
Li, R.1
Li, Y.2
Kristiansen, K.3
Wang, J.4
-
49
-
-
55549097849
-
The diploid genome sequence of an Asian individual
-
10.1038/nature07484, 2716080, 18987735
-
Wang J, Wang W, Li R, Li Y, Tian G, Goodman L, Fan W, Zhang J, Li J, Zhang J, et al. The diploid genome sequence of an Asian individual. Nature 2008, 456(7218):60-65. 10.1038/nature07484, 2716080, 18987735.
-
(2008)
Nature
, vol.456
, Issue.7218
, pp. 60-65
-
-
Wang, J.1
Wang, W.2
Li, R.3
Li, Y.4
Tian, G.5
Goodman, L.6
Fan, W.7
Zhang, J.8
Li, J.9
Zhang, J.10
-
50
-
-
0347361692
-
Selective constraints on intron evolution in Drosophila
-
1462880, 14704170
-
Parsch J. Selective constraints on intron evolution in Drosophila. Genetics 2003, 165(4):1843-1851. 1462880, 14704170.
-
(2003)
Genetics
, vol.165
, Issue.4
, pp. 1843-1851
-
-
Parsch, J.1
-
51
-
-
33747835539
-
Computing Ka and Ks with a consideration of unequal transitional substitutions
-
10.1186/1471-2148-6-44, 1552089, 16740169
-
Zhang Z, Li J, Yu J. Computing Ka and Ks with a consideration of unequal transitional substitutions. BMC Evol Biol 2006, 6:44. 10.1186/1471-2148-6-44, 1552089, 16740169.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 44
-
-
Zhang, Z.1
Li, J.2
Yu, J.3
-
52
-
-
0033979433
-
Estimating Synonymous and Nonsynonymous Substitution Rates Under Realistic Evolutionary Models
-
10.1093/oxfordjournals.molbev.a026236, 10666704
-
Yang Z, Nielsen R. Estimating Synonymous and Nonsynonymous Substitution Rates Under Realistic Evolutionary Models. Mol Biol Evol 2000, 17:32-43. 10.1093/oxfordjournals.molbev.a026236, 10666704.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 32-43
-
-
Yang, Z.1
Nielsen, R.2
-
53
-
-
0028910659
-
Molecular phylogeny and divergence times of drosophilid species
-
Russo CA, Takezaki N, Nei M. Molecular phylogeny and divergence times of drosophilid species. Mol Biol Evol 1995, 12(3):391-404.
-
(1995)
Mol Biol Evol
, vol.12
, Issue.3
, pp. 391-404
-
-
Russo, C.A.1
Takezaki, N.2
Nei, M.3
-
54
-
-
0037250168
-
The UCSC Genome Browser Database
-
10.1093/nar/gkg129, 165576, 12519945
-
Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ, et al. The UCSC Genome Browser Database. Nucleic Acids Res 2003, 31(1):51-54. 10.1093/nar/gkg129, 165576, 12519945.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.1
, pp. 51-54
-
-
Karolchik, D.1
Baertsch, R.2
Diekhans, M.3
Furey, T.S.4
Hinrichs, A.5
Lu, Y.T.6
Roskin, K.M.7
Schwartz, M.8
Sugnet, C.W.9
Thomas, D.J.10
-
55
-
-
0037267806
-
Human-mouse alignments with BLASTZ
-
10.1101/gr.809403, 430961, 12529312
-
Schwartz S, Kent WJ, Smit A, Zhang Z, Baertsch R, Hardison RC, Haussler D, Miller W. Human-mouse alignments with BLASTZ. Genome Res 2003, 13(1):103-107. 10.1101/gr.809403, 430961, 12529312.
-
(2003)
Genome Res
, vol.13
, Issue.1
, pp. 103-107
-
-
Schwartz, S.1
Kent, W.J.2
Smit, A.3
Zhang, Z.4
Baertsch, R.5
Hardison, R.C.6
Haussler, D.7
Miller, W.8
|