Altered expression profiles of microRNAs upon arsenic exposure of human umbilical vein endothelial cells

Environmental Toxicology and Pharmacology

Volumn 34, Issue 2, 2012, Pages 381-387

  Li, Xinna ^a   Shi, Yanfen ^a,d   Wei, Yudan ^b   Ma, Xiaotu ^c   Li, Yulin ^a   Li, Ronggui ^a  

^a Basic Medical College   (China)

^b MERCER UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c UNIVERSITY OF TEXAS AT DALLAS   (United States)

^d CHINA JAPAN FRIENDSHIP HOSPITAL   (China)

Author keywords

Arsenic; DNA motifs; HUVECs; MicroRNAs

Indexed keywords

ARSENIC; MICRORNA; MICRORNA 1252; MICRORNA 198; MICRORNA 19B; MICRORNA 21; MICRORNA 24; MICRORNA 29B; MICRORNA 33A; MICRORNA 508 5P; MICRORNA 874; PHOSPHOPROTEIN; RNA; UNCLASSIFIED DRUG; CELL DNA; MICRORNA 103; MICRORNA 107; MICRORNA 10A; MICRORNA 130A; MICRORNA 132; MICRORNA 138; MICRORNA 16; MICRORNA 182; MICRORNA 194; MICRORNA 196B; MICRORNA 200A; MICRORNA 215; MICRORNA 221; MICRORNA 23B; MICRORNA 26A; MICRORNA 29C; MICRORNA 301A; MICRORNA 335; MICRORNA 365; MICRORNA 429; MICRORNA 493; MICRORNA 96;

ALTERNATIVE RNA SPLICING; ARTICLE; BLOOD VESSEL INJURY; CELL FUNCTION; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DOWN REGULATION; GENE EXPRESSION REGULATION; GENE TARGETING; GENETIC ANALYSIS; HUMAN; HUMAN CELL; LONG TERM EXPOSURE; MOLECULAR DYNAMICS; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; PROTEIN TARGETING; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA ANALYSIS; TRANSCRIPTION REGULATION; UMBILICAL VEIN ENDOTHELIAL CELL; UPREGULATION; ANALYZER; APOPTOSIS; BIOINFORMATICS; COMPUTER PROGRAM; CYTOTOXICITY; GENE EXPRESSION PROFILING; GENE FUNCTION; MICROCHIP ANALYSIS; PROTEIN MOTIF; DRUG EFFECT; GENETICS; MICROARRAY ANALYSIS; NUCLEOTIDE MOTIF; POLLUTANT;

ARSENIC; ENVIRONMENTAL POLLUTANTS; GENE EXPRESSION REGULATION; HUMAN UMBILICAL VEIN ENDOTHELIAL CELLS; HUMANS; MICROARRAY ANALYSIS; MICRORNAS; NUCLEOTIDE MOTIFS; PROMOTER REGIONS, GENETIC;

EID: 84862743706     PISSN: 13826689     EISSN: 18727077     Source Type: Journal    
DOI: 10.1016/j.etap.2012.05.003     Document Type: Article

References (34)

1. Bailey, T.L., Elkan, C., 1994. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2, 28-36.
2. Bartel, D.P., 2004. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116 (2), 281-297.
3. Betel, D., Wilson, M., Gabow, A., Marks, D.S., Sander, C., 2008. The microRNA.org resource: targets and expression. Nucleic Acids Res. 36 (Database issue), D149-D153.
4. Brennecke, J., Hipfner, D.R., Stark, A., Russell, R.B., Cohen, S.M., 2003. bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila. Cell 113 (1), 25-36.
5. Cao, Y., Yu, S.L., Wang, Y., Guo, G.Y., Ding, Q., An, R.H., 2011. MicroRNA-dependent regulation of PTEN after arsenic trioxide treatment in bladder cancer cell line T24. Tumour Biol. 32 (1), 179-188.
6. Chen, C.Z., Li, L., Lodish, H.F., Bartel, D.P., 2004. MicroRNAs modulate hematopoietic lineage differentiation. Science 303 (5654), 83-86.
7. Cheng, Y., Ji, R., Yue, J., Yang, J., Liu, X., Chen, H., Dean, D.B., Zhang, C., 2007. MicroRNAs are aberrantly expressed in hypertrophic heart: do they play a role in cardiac hypertrophy? Am. J. Pathol. 170 (6), 1831-1840.
8. Choudhuri, S., 2010. Small noncoding RNAs: biogenesis, function, and emerging significance in toxicology. J. Biochem. Mol. Toxicol. 24 (3), 195-216.
9. Corcoran, D.L., Pandit, K.V., Gordon, B., Bhattacharjee, A., Kaminski, N., Benos, P.V., 2009. Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data. PLoS One 4 (4), e5279.
10. Coronado-Gonzalez, J.A., Del Razo, L.M., Garcia-Vargas, G., Sanmiguel-Salazar, F., Escobedo-de la Pena, J., 2007. Inorganic arsenic exposure and type 2 diabetes mellitus in Mexico. Environ. Res. 104 (3), 383-389.
11. Davalos, A., Goedeke, L., Smibert, P., Ramirez, C.M., Warrier, N.P., Andreo, U., Cirera-Salinas, D., Rayner, K., Suresh, U., Pastor-Pareja, J.C., et al., 2011. MiR-33a/b contribute to the regulation of fatty acid metabolism and insulin signaling. Proc. Natl. Acad. Sci. U. S. A. 108 (22), 9232-9237.
12. Esquela-Kerscher, A., Slack, F.J., 2006. Oncomirs - microRNAs with a role in cancer. Nat. Rev. Cancer 6 (4), 259-269.
13. Fish, J.E., Santoro, M.M., Morton, S.U., Yu, S., Yeh, R.F., Wythe, J.D., Ivey, K.N., Bruneau, B.G., Stainier, D.Y., Srivastava, D., 2008. MiR-126 regulates angiogenic signaling and vascular integrity. Dev. Cell 15 (2), 272-284.
14. He, L., Thomson, J.M., Hemann, M.T., Hernando-Monge, E., Mu, D., Goodson, S., Powers, S., Cordon-Cardo, C., Lowe, S.W., Hannon, G.J., et al., 2005. A microRNA polycistron as a potential human oncogene. Nature 435 (7043), 828-833.
15. Heusschen, R., van Gink, M., Griffioen, A.W., Thijssen, V.L., 2010. MicroRNAs in the tumor endothelium: novel controls on the angioregulatory switchboard. Biochim. Biophys. Acta 1805 (1), 87-96.
16. Huang da, W., Sherman, B.T., Lempicki, R.A., 2009. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4 (1), 44-57.
17. Jiang, X.H., Wong, B.C., Yuen, S.T., Jiang, S.H., Cho, C.H., Lai, K.C., Lin, M.C., Kung, H.F., Lam, S.K., 2001. Arsenic trioxide induces apoptosis in human gastric cancer cells through up-regulation of p53 and activation of caspase-3. Int. J. Cancer 91 (2), 173-179.
18. John, B., Enright, A.J., Aravin, A., Tuschl, T., Sander, C., Marks, D.S., 2004. Human microRNA targets. PLoS Biol. 2 (11), e363.
19. Kao, Y.H., Yu, C.L., Chang, L.W., Yu, H.S., 2003. Low concentrations of arsenic induce vascular endothelial growth factor and nitric oxide release and stimulate angiogenesis in vitro. Chem. Res. Toxicol. 16 (4), 460-468.
20. Kent, W.J., Sugnet, C.W., Furey, T.S., Roskin, K.M., Pringle, T.H., Zahler, A.M., Haussler, D., 2002. The human genome browser at UCSC. Genome Res. 12 (6), 996-1006.
21. Lee, Y., Kim, M., Han, J., Yeom, K.H., Lee, S., Baek, S.H., Kim, V.N., 2004. MicroRNA genes are transcribed by RNA polymerase II. EMBO J. 23 (20), 4051-4060.
22. Marsit, C.J., Eddy, K., Kelsey, K.T., 2006. MicroRNA responses to cellular stress. Cancer Res. 66 (22), 10843-10848.
23. Meng, X.Z., Zheng, T.S., Chen, X., Wang, J.B., Zhang, W.H., Pan, S.H., Jiang, H.C., Liu, L.X., 2011. MicroRNA expression alteration after arsenic trioxide treatment in HepG-2 cells. J. Gastroenterol. Hepatol. 26 (1), 186-193.
24. Navas-Acien, A., Silbergeld, E.K., Pastor-Barriuso, R., Guallar, E., 2008. Arsenic exposure and prevalence of type 2 diabetes in US adults. JAMA 300 (7), 814-822.
25. Rahman, M.M., Naidu, R., Bhattacharya, P., 2009. Arsenic contamination in groundwater in the Southeast Asia region. Environ. Geochem. Health 31 (Suppl. 1), 9-21.
26. Shi, Y., Wei, Y., Qu, S., Wang, Y., Li, Y., Li, R., 2010. Arsenic induces apoptosis of human umbilical vein endothelial cells through mitochondrial pathways. Cardiovasc. Toxicol. 10 (3), 153-160.
27. Tang, F., Liu, G., He, Z., Ma, W.Y., Bode, A.M., Dong, Z., 2006. Arsenite inhibits p53 phosphorylation, DNA binding activity, and p53 target gene p21 expression in mouse epidermal JB6 cells. Mol. Carcinog. 45 (11), 861-870.
28. Tseng, C.H., 2008. Cardiovascular disease in arsenic-exposed subjects living in the arseniasis-hyperendemic areas in Taiwan. Atherosclerosis 199 (1), 12-18.
29. Tseng, C.H., Chong, C.K., Tseng, C.P., Centeno, J.A., 2007. Blackfoot disease in Taiwan: its link with inorganic arsenic exposure from drinking water. Ambio 36 (1), 82-84.
30. Tseng, C.H., Huang, Y.K., Huang, Y.L., Chung, C.J., Yang, M.H., Chen, C.J., Hsueh, Y.M., 2005. Arsenic exposure, urinary arsenic speciation, and peripheral vascular disease in blackfoot disease-hyperendemic villages in Taiwan. Toxicol. Appl. Pharmacol. 206 (3), 299-308.
31. Weber, C., Schober, A., Zernecke, A., 2010. MicroRNAs in arterial remodelling, inflammation and atherosclerosis. Curr. Drug Targets 11 (8), 950-956.
32. Yin, K.J., Deng, Z., Hamblin, M., Xiang, Y., Huang, H., Zhang, J., Jiang, X., Wang, Y., Chen, Y.E., 2010. Peroxisome proliferator-activated receptor delta regulation of miR-15a in ischemia-induced cerebral vascular endothelial injury. J. Neurosci. 30 (18), 6398-6408.
33. Yu, G., Sun, D., Zheng, Y., 2007. Health effects of exposure to natural arsenic in groundwater and coal in China: an overview of occurrence. Environ. Health Perspect. 115 (4), 636-642.
34. Zubakov, D., Boersma, A.W., Choi, Y., van Kuijk, P.F., Wiemer, E.A., Kayser, M., 2010. MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation. Int. J. Legal Med. 124 (3), 217-226.