-
1
-
-
69249085408
-
Stability and aggregation of ranked gene lists
-
Boulesteix, A.L., and Slawski, M. 2009. Stability and aggregation of ranked gene lists. Brief Bioinform. 10, 556.
-
(2009)
Brief Bioinform
, vol.10
, pp. 556
-
-
Boulesteix, A.L.1
Slawski, M.2
-
2
-
-
34047230770
-
Discovering motifs in ranked lists of DNA sequences
-
Eden, E., Lipson, D., Yogev, S., et al. 2007. Discovering motifs in ranked lists of DNA sequences. PLoS Comp. Biol. 3, e39.
-
(2007)
PLoS Comp. Biol
, vol.3
-
-
Eden, E.1
Lipson, D.2
Yogev, S.3
-
3
-
-
33645825183
-
Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer
-
Ein-Dor, L., Zuk, O., and Domany, E., 2006. Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer. Proc. Natl. Acad. Sci. USA 103, 5923.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 5923
-
-
Ein-Dor, L.1
Zuk, O.2
Domany, E.3
-
4
-
-
0001020733
-
A multidimensional version of the Kolmogorov-Smirnov test
-
Fasano, G., and Franceschini, A. 1987. A multidimensional version of the Kolmogorov-Smirnov test. Mon. Not. Roy. Astron. Soc. 225, 155-170.
-
(1987)
Mon. Not. Roy. Astron. Soc
, vol.225
, pp. 155-170
-
-
Fasano, G.1
Franceschini, A.2
-
5
-
-
34047118042
-
Overlapping probabilities of top ranking gene lists, hypergeometric distribution, and stringency of gene selection criterion
-
Fury, W., Batliwalla, F., Gregersen, P.K., et al. 2006. Overlapping probabilities of top ranking gene lists, hypergeometric distribution, and stringency of gene selection criterion. Conf. Proc. IEEE Eng. Med. Biol. Soc.
-
(2006)
Conf. Proc. IEEE Eng. Med. Biol. Soc
-
-
Fury, W.1
Batliwalla, F.2
Gregersen, P.K.3
-
6
-
-
0034616930
-
Functional discovery via a compendium of expression profiles
-
Hughes, T.R., Marton, M.J., Jones, A.R., et al. 2000. Functional discovery via a compendium of expression profiles. Cell 102, 109-126.
-
(2000)
Cell
, vol.102
, pp. 109-126
-
-
Hughes, T.R.1
Marton, M.J.2
Jones, A.R.3
-
7
-
-
26444615348
-
Visualizing overlap and rank differences among web-wide search engines
-
Jacso, P. 2005. Visualizing overlap and rank differences among web-wide search engines. Online Inform. Rev. 29, 554-560.
-
(2005)
Online Inform. Rev
, vol.29
, pp. 554-560
-
-
Jacso, P.1
-
8
-
-
38349106729
-
Algebraic stability indicators for ranked lists in molecular profiling
-
Jurman, G., Merler, S., Barla, A., et al. 2008. Algebraic stability indicators for ranked lists in molecular profiling. Bioinformatics 24, 258.
-
(2008)
Bioinformatics
, vol.24
, pp. 258
-
-
Jurman, G.1
Merler, S.2
Barla, A.3
-
9
-
-
33749335282
-
The connectivity map: Using gene-expression signatures to connect small molecules, genes, and disease
-
Lamb, J., Crawford, E.D., Peck, D., et al. 2006. The connectivity map: using gene-expression signatures to connect small molecules, genes, and disease. Science 313, 1929-1935.
-
(2006)
Science
, vol.313
, pp. 1929-1935
-
-
Lamb, J.1
Crawford, E.D.2
Peck, D.3
-
10
-
-
33748711623
-
OrderedList - A bioconductor package for detecting similarity in ordered gene lists
-
Lottaz, C., Yang, X., Scheid, S., et al. 2006. OrderedList-a bioconductor package for detecting similarity in ordered gene lists. Bioinformatics 22, 2315.
-
(2006)
Bioinformatics
, vol.22
, pp. 2315
-
-
Lottaz, C.1
Yang, X.2
Scheid, S.3
-
11
-
-
85198904462
-
Two-dimensional goodness-of-fit testing in astronomy
-
Peacock, JA. 1983. Two-dimensional goodness-of-fit testing in astronomy. Mon. Not. Roy. Astron. Soc. 202, 615-627.
-
(1983)
Mon. Not. Roy. Astron. Soc
, vol.202
, pp. 615-627
-
-
Peacock, J.A.1
-
12
-
-
33645024314
-
Assessing stability of gene selection in microarray data analysis
-
Qiu, X., Xiao, Y., Gordon, A., et al. 2006. Assessing stability of gene selection in microarray data analysis. BMC Bioinform. 7, 50.
-
(2006)
BMC Bioinform
, vol.7
, pp. 50
-
-
Qiu, X.1
Xiao, Y.2
Gordon, A.3
-
13
-
-
60149084519
-
PASTAA: Identifying transcription factors associated with sets of co-regulated genes
-
Roider, H.G., Manke, T., O'Keeffe, S., et al. 2009. PASTAA: identifying transcription factors associated with sets of co-regulated genes. Bioinformatics 25, 435.
-
(2009)
Bioinformatics
, vol.25
, pp. 435
-
-
Roider, H.G.1
Manke, T.2
O'Keeffe, S.3
-
14
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
Su, A.I., Wiltshire, T., Batalov, S., et al. 2004. A gene atlas of the mouse and human protein-encoding transcriptomes. Proc. Natl. Acad. Sci. USA 101, 6062.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 6062
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
-
15
-
-
27344435774
-
Gene set enrichment analysis: Knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian, A., Tamayo, P., Mootha, V.K., et al. 2005. Gene set enrichment analysis: knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. USA 102, 15545-15550.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
-
16
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
Wang, E.T., Sandberg, R., Luo, S., et al. 2008. Alternative isoform regulation in human tissue transcriptomes. Nature 456 470-476.
-
(2008)
Nature
, vol.456
, pp. 470-476
-
-
Wang, E.T.1
Sandberg, R.2
Luo, S.3
-
17
-
-
33748489754
-
Similarities of ordered gene lists
-
Yang, X., Bentink, S., Scheid, S., et al. 2006. Similarities of ordered gene lists. J. Bioinform. Comput. Biol. 4, 693.
-
(2006)
J. Bioinform. Comput. Biol
, vol.4
, pp. 693
-
-
Yang, X.1
Bentink, S.2
Scheid, S.3
-
18
-
-
41649108521
-
Comparing the characteristics of gene expression profiles derived by univariate and multivariate classification methods
-
article 7
-
Zucknick, M., Richardson, S., and Stronach, E.A. 2008. Comparing the characteristics of gene expression profiles derived by univariate and multivariate classification methods. Stat. Appl. Genet. Mol. Biol., 7, article 7.
-
(2008)
Stat. Appl. Genet. Mol. Biol
, vol.7
-
-
Zucknick, M.1
Richardson, S.2
Stronach, E.A.3
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