Sample prefractionation for mass spectrometry quantification of low-abundance membrane proteins

Analytical Chemistry

Volumn 84, Issue 12, 2012, Pages 5186-5191

  Wang, Meiyao ^a,b   Heo, Gun Young ^c   Omarova, Saida ^c   Pikuleva, Irina A ^c   Turko, Illarion V ^a,b  

^a UNIVERSITY OF MARYLAND BIOTECHNOLOGY INSTITUTE   (United States)

^b NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

^c CASE WESTERN RESERVE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL IMPLICATIONS; BIOLOGICAL SAMPLES; CYTOCHROME P450 REDUCTASE; CYTOCHROMES P450; ELECTRON TRANSFERRING; FERREDOXIN REDUCTASE; FULL-LENGTH PROTEINS; HUMAN TISSUES; INTERNAL STANDARDS; LOW-ABUNDANCE PROTEINS; MEMBRANE PROTEINS; MEMBRANE-BOUND; MULTIPLE REACTION MONITORING; OPTIMIZED PROTOCOL; PREFRACTIONATION; QUANTITATIVE MEASUREMENT; RETINAL PIGMENT EPITHELIUM; SAMPLE PROCESSING; TARGET PROTEINS; TEMPORAL LOBES;

BIOLOGICAL MEMBRANES; ISOTOPES; MASS SPECTROMETRY; OPTIMIZATION; SOLUBILITY; TISSUE;

PROTEINS;

MEMBRANE PROTEIN;

AMINO ACID SEQUENCE; ANTIBODY SPECIFICITY; ARTICLE; CHEMISTRY; FRACTIONATION; HUMAN; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; SOLUBILITY;

AMINO ACID SEQUENCE; CHEMICAL FRACTIONATION; HUMANS; MASS SPECTROMETRY; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; ORGAN SPECIFICITY; SOLUBILITY;

EID: 84862534271     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac300587v     Document Type: Article

References (22)

1. Lu, B.; McClatchy, D. B.; Kim, J. Y.; Yates, J. R., III Proteomics 2008, 8, 3947-3955
2. Liao, W.-L.; Heo, G.-Y.; Doddere, N. G.; Pikuleva, I. A.; Turko, I. V. Anal. Chem. 2010, 82, 5760-5767
3. Liao, W.-L.; Heo, G.-Y.; Dodder, N. G.; Reem, R. E.; Mast, N.; Huang, S.; DiPatre, P. L.; Turko, I. V.; Pikuleva, I. A. J. Proteome Res. 2011, 10, 241-248
4. Yu, K. H.; Barry, C. G.; Austin, D.; Busch, C. M.; Sangar, V.; Rustgi, A. K.; Blair, I. A. J. Proteome Res. 2009, 8, 1565-1576
5. Rangiah, K.; Tippornwong, M.; Sangar, V.; Austin, D.; Tetreault, M.-P.; Rustgi, A. K.; Blair, I. A.; Yu, K. H. J. Proteome Res. 2009, 8, 5153-5164
6. Janecki, D. J.; Bemis, K. G.; Tegeler, T. J.; Sanghani, P. C.; Zhai, L.; Hurley, T. D.; Bosron, W. F.; Wang, M. Anal. Biochem. 2007, 369, 18-26
7. Brun, V.; Dupuis, A.; Adrait, A.; Marcellin, M.; Thomas, D.; Court, M.; Vandenesch, F.; Garin, J. Mol. Cell. Proteomics. 2007, 6, 2139-2149
8. von Wachenfeldt, C.; Johnson, E. F. In Cytochrome P450: Structure, Mechanism, and Biochemistry; Ortiz de Montellano, P. R., Ed.; Plenum Press: New York, 1995; pp 183-244.
9. Wang, M.; Roberts, D. L.; Paschke, R.; Shea, T. M.; Masters, B. S.; Kim, J. J. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 8411-8416
10. Ziegler, G. A.; Vonrhein, C.; Hanukoglu, I.; Schulz, G. E. J. Mol. Biol. 1999, 289, 981-990
11. Mast, N.; Norcross, R.; Andersson, U.; Shou, M.; Nakayama, K.; Bjorkhem, I.; Pikuleva, I. A. Biochemistry 2003, 42, 14284-14292
12. Sagara, Y.; Wada, A.; Takata, Y.; Waterman, M. R.; Sekimizu, K.; Horiuchi, T. Biol. Pharm. Bull. 1993, 16, 627-630
13. Liao, W.-L.; Turko, I. V. Anal. Biochem. 2008, 377, 55-61
14. Fujiki, Y.; Hubbard, A. L.; Fowles, S.; Lazarow, P. B. J. Cell Biol. 1982, 93, 97-102
15. Miller, W. L.; Agrawal, V.; Sandee, D.; Tee, M. K.; Huang, N.; Choi, J. H.; Morrissey, K.; Giacomini, K. M. Mol. Cell. Endocrinol. 2010, 336, 174-179
16. Huang, N.; Pandey, A. V.; Agrawal, V.; Reardon, W.; Lapunzina, P. D.; Mowat, D.; Jabs, E. W.; van Vliet, G.; Sack, J.; Fluck, C. E.; Miller, W. L. Am. J. Hum. Genet. 2005, 76, 729-749
17. Stiles, A. R.; McDonald, J. G.; Bauman, D. R.; Russell, D. W. J. Biol. Chem. 2009, 284, 28485-28489
18. Meaney, S.; Heverin, M.; Panzenboeck, U.; Ekstrom, L.; Axelsson, M.; Andersson, U.; Diczfalusy, U.; Pikuleva, I.; Wahren, J.; Sattler, W.; Bjorkhem, I. J. Lipid Res. 2007, 48, 944-951
19. Mast, N.; Reem, R.; Bederman, I.; Huang, S.; DiPatre, P. L.; Bjorkhem, I.; Pikuleva, I. A. Invest. Ophthalmol. Vis. Sci. 2011, 52, 594-603
20. Pikuleva, I. A.; Babiker, A.; Waterman, M. R.; Bjorkhem, I. J. Biol. Chem. 1998, 273, 18153-18160
21. Setchell, K. D.; Schwarz, M.; O'Connell, N. C.; Lund, E. G.; Davis, D. L.; Lathe, R.; Thompson, H. R.; Weslie Tyson, R.; Sokol, R. J.; Russell, D. W. J. Clin. Invest. 1998, 102, 1690-1703
22. Tsaousidou, M. K.; Ouahchi, K.; Warner, T. T.; Yang, Y.; Simpson, M. A.; Laing, N. G.; Wilkinson, P. A.; Madrid, R. E.; Patel, H.; Hentati, F.; Patton, M. A.; Hentati, A.; Lamont, P. J.; Siddique, T.; Crosby, A. H. Am. J. Hum. Genet. 2008, 82, 510-515