QTL mapping for seedling traits in wheat grown under varying concentrations of N, P and K nutrients

Theoretical and Applied Genetics

Volumn 124, Issue 5, 2012, Pages 851-865

  Guo, Ying ^a   Kong, Fan mei ^a   Xu, Yun feng ^b   Zhao, Yan ^a   Liang, Xue ^a   Wang, Ying ying ^a   An, Diao guo ^b   Li, Si shen ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

^b INSTITUTE OF GEOLOGY AND GEOPHYSICS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOMES; EFFICIENCY; FORESTRY; PLANTS (BOTANY);

CORRELATION COEFFICIENT; HYDROPONIC CULTURE; NUTRIENT UTILIZATION; NUTRIENT-USE EFFICIENCIES; POSITIVE CORRELATIONS; QUANTITATIVE TRAIT LOCUS; RECOMBINANT INBRED LINES; UTILIZATION EFFICIENCY;

NUTRIENTS;

TRITICUM AESTIVUM;

NITROGEN; PHOSPHORUS; POTASSIUM;

ANALYSIS OF VARIANCE; ARTICLE; CHINA; CROSS BREEDING; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PHENOTYPE; QUANTITATIVE TRAIT LOCUS; SEEDLING; WHEAT;

ANALYSIS OF VARIANCE; CHINA; CROSSES, GENETIC; NITROGEN; PHENOTYPE; PHOSPHORUS; POTASSIUM; QUANTITATIVE TRAIT LOCI; SEEDLING; TRITICUM;

EID: 84862287189     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-011-1749-7     Document Type: Article

References (46)

1. An DG, Su JY, Liu QY, Zhu YG, Tong YP, Li JM, Jing RL, Li B, Li ZS (2006) Mapping QTLs for nitrogen uptake in relation to the early growth of wheat (Triticum aestivum L.). Plant Soil 284: 73-84.
2. Ceotto E (2005) The issues of energy and carbon cycle: new perspectives for assessing the environmental impact of animal waste utilization. Bioresour Technol 96: 191-196.
3. Churchill GA, Doerge RW (1994) Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
4. Clárk RB (1983) Plant genotype differences in the uptake, translocation, accumulation, and use of mineral elements required for plant growth. Plant Soil 72: 175-196.
5. Crossa J, Burgueño J, Dreisigacker S, Vargas M, Herrera-Foessel SA, Lillemo M, Singh RP, Trethowan R, Warburton M, Franco J, Reynolds M, Crouch JH, Ortiz R (2007) Association analysis of historical bread wheat germplasm using additive genetic covariance of relatives and population structure. Genetics 177: 1889-1913.
6. Davidson EA (2009) The contribution of manure and fertilizer nitrogen to atmospheric nitrous oxide since 1860. Nat Geosci 2: 659-662.
7. De Groot CC, Marcelis LFM, van den Boogaard R, Kaiser WM, Lambers H (2003a) Interaction of nitrogen and phosphorus nutrition in determining growth. Plant Soil 248: 257-268.
8. De Groot CC, van den Boogaard R, Marcelis LFM, Harbinson J, Lambers H (2003b) Contrasting effects of N and P deprivation on regulation of photosynthesis in tomato plants in relation to feedback limitation. J Exp Bot 54: 1957-1967.
9. Doerge RW (2002) Mapping and analysis of quantitative trait loci in experimental populations. Nat Rev Genet 3: 43-52.
10. Fontaine JX, Ravel C, Pageau K, Heumez E, Dubois F, Hirel B, Le Gouis J (2009) A quantitative genetic study for elucidating the contribution of glutamine synthetase, glutamate dehydrogenase and other nitrogen-related physiological traits to the agronomic performance of common wheat. Theor Appl Genet 119: 645-662.
11. Galloway JN, Townsend AR, Erisman JW, Bekunda M, Cai ZC, Freney JR, Martinelli LA, Seitzinger SP, Sutton MA (2008) Transformation of the nitrogen cycle: recent trends, questions, and potential solutions. Science 320: 889-892.
12. Giles J (2005) Nitrogen study fertilizes fears of pollution. Nature 433: 791.
13. Habash DZ, Bernard S, Schondelmaier J, Weyen J, Quarrie SA (2007) The genetics of nitrogen use in hexaploid wheat: N utilisation, development and yield. Theor Appl Genet 114: 403-419.
14. Harada H, Leigh RA (2006) Genetic mapping of natural variation in potassium concentrations in shoots of Arabidopsis thaliana. J Exp Bot 57: 953-960.
15. Hirel B, Bertin P, Quilleré I, Bourdoncle W, Attagnant C, Dellay C, Gouy A, Cadiou S, Retailliau C, Falque M, Gallais A (2001) Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize. Plant Physiol 125: 1258-1270.
16. Hoagland DR, Arnon DI (1950) The water culture method for growing plants without soil. Calif Agric Exp Stn Circ 347: 32.
17. Janssen BH (1998) Efficient use of nutrients: an art of balancing. Field Crop Res 56: 197-201.
18. Kjeldahl JGC (1883) A new method for the determination of nitrogen in organic matter. Z Anal Chem 22: 366-372.
19. Knapp SJ, Stroup WW, Ross WM (1985) Exact confidence intervals for heritability on a progeny mean basis1. Crop Sci 25: 192-194.
20. Laperche A, Devienne-Barret F, Maury O, Le Gouis J, Ney B (2006) A simplified conceptual model of carbon/nitrogen functioning for QTL analysis of winter wheat adaptation to nitrogen deficiency. Theor Appl Genet 113: 1131-1146.
21. Laperche A, Brancourt-Hulmel M, Heumez E, Gardet O, Hanocq E, Devienne-Barret F, Le Gouis J (2007) Using genotype × nitrogen interaction variables to evaluate the QTL involved in wheat tolerance to nitrogen constraints. Theor Appl Genet 115: 399-415.
22. Laperche A, Le Gouis J, Hanocq E, Brancourt-Hulmel M (2008) Modelling nitrogen stress with probe genotypes to assess genetic parameters and genetic determinism of winter wheat tolerance to nitrogen constraint. Euphytica 161: 259-271.
23. Le Gouis J, Béghin D, Heumez E, Pluchard P (2000) Genetic differences for nitrogen uptake and nitrogen utilization efficiencies in winter wheat. Eur J Agron 12: 163-173.
24. Li SS, Jia JZ, Wei XY, Zhang XC, Chen HM, Sun HY, Fan YD, Li LZ, Zhao XH, Lei TD, Xu YF, Jiang FS, Wang HG, Li LH (2007a) A intervarietal genetic map and QTL analysis for yield traits in wheat. Mol Breed 20: 167-178.
25. Li ZX, Ni ZF, Peng HR, Liu ZY, Nie XL, Xu SB, Liu G, Sun QX (2007b) Molecular mapping of QTLs for root response to phosphorus deficiency at seedling stage in wheat (Triticum aestivum L.). Prog Nat Sci 17: 1177-1184.
26. McCartney CA, Somers DJ, Humphreys DJ, Lukow O (2005) Mapping quantitative trait loci controlling agronomic traits in the spring wheat cross RL 4452 × AC 'Domain'. Genome 48: 870-883.
27. Ozturk L, Eker S, Torun B, Cakmak I (2005) Variation in phosphorus efficiency among 73 bread and durum wheat genotypes grown in a phosphorus-deficient calcareous soil. Plant Soil 269: 69-80.
28. Peleg Z, Cakmak I, Ozturk L, Yazici A, Jun Y, Budak H, Korol AB, Fahima T, Saranga Y (2009) Quantitative trait loci conferring grain mineral nutrient concentrations in durum wheat 3 wild emmer wheat RIL population. Theor Appl Genet 119: 353-369.
29. Quarrie SA, Steed A, Calestani C, Semikhodskii A, Lebreton C, Chinoy C, Steele N, Pljevljakusić D, Waterman E, Weyen J, Schondelmaier J, Habash DZ, Farmer P, Saker L, Clarkson DT, Abugalieva A, Yessimbekova M, Turuspekov Y, Abugalieva S, Tuberosa R, Sanguineti MC, Hollington PA, Aragués R, Royo A, Dodig D (2005) A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese Spring × SQ1 and its use to compare QTLs for grain yield across a range of environments. Theor Appl Genet 110: 865-880.
30. Quarrie SA, Quarrie SP, Radosevic R, Rancic D, Kaminska A, Barnes JD, Leverington M, Ceoloni C, Dodig D (2006) Dissecting a wheat QTL for yield present in a range of environments: from the QTL to candidate genes. J Exp Bot 57: 2627-2637.
31. Rengel Z, Damon PM (2008) Crops and genotypes differ in efficiency of potassium uptake and use. Physiol Plantarum 133: 624-636.
32. Rengel Z, Marschner P (2005) Nutrient availability and management in the rhizosphere: exploiting genotypic differences. New Phytol 168: 305-312.
33. Schachtman DP, Shin R (2007) Nutrient sensing and signaling: NPKS. Annu Rev Plant Biol 58: 47-69.
34. Siddiqi M, Glass A (1981) Utilization index: a modified approach to the estimation and comparison of nutrient utilization efficiency in plants. J Plant Nutr 4: 289-302.
35. Stoll M, Kwitek-Black AE, Cowly AW Jr, Harris EL, Harrap SB, Krieger JE, Printz MP, Provoost AP, Sassard J, Jacob HJ (2000) New target regions for human hypertension via comparative genomics. Genome Res 10: 473-482.
36. Su JY, Xiao YM, Li M, Liu QY, Li B, Tong YP, Jia JZ, Li ZS (2006) Mapping QTLs for phosphorus-deficiency tolerance at wheat seedling stage. Plant Soil 281: 25-36.
37. Su JY, Zheng Q, Li HW, Li B, Jing RL, Tong YP, Li ZS (2009) Detection of QTLs for phosphorus use efficiency in relation to agronomic performance of wheat grown under phosphorus sufficient and limited conditions. Plant Sci 176: 824-836.
38. ter Steege MW, den Ouden FM, Lambers H, Stam P, Peeters AJ (2005) Genetic and physiological architecture of early vigor in Aegilops tauschii, the D-genome donor of hexaploid wheat. A quantitative trait loci analysis. Plant Physiol 139: 1078-1094.
39. Tesfaye M, Liu J, Allan DL, Vance CP (2007) Genomic and genetic control of phosphate stress in legumes. Plant Physiol 144: 594-603.
40. Vance CP, Uhde-Stone C, Allan DL (2003) Phosphorus acquisition and use: critical adaptations by plants for securing a nonrenewable resource. New Phytol 157: 423-447.
41. Wang S, Basten CJ, Zeng ZB (2007) Windows QTL Cartographer 2. 5. Department of Statistics, North Carolina State University, Raleigh. http://statgen. ncsu. edu/qtlcart/WQTLCart. htm.
42. Wang YY, Sun XY, Zhao Y, Kong FM, Guo Y, Zhang GZ, Pu YY, Wu K, Li SS (2011) Enrichment of a common wheat genetic map and QTL mapping of genes for fatty acid content in grain. Plant Sci 181: 65-75.
43. White PJ, Broadley MR (2001) Chloride in soils and its uptake and movement within the plant: a review. Ann Bot 88: 967-988.
44. White PJ, Hammond JP, King GJ, Bowen HC, Hayden RM, Meacham MC, Spracklen WP, Broadley MR (2010) Genetic analysis of potassium use efficiency in Brassica oleracea. Ann Bot 105: 1199-1210.
45. Xu GH, Magen H, Tarchitzky J, Kafkafi U (2000) Advances in chloride nutrition of plants. Adv Agron 68: 97-150.
46. Zhang HC, Cao ZH, Shen QR, Wang MH (2003) Effect of phosphate fertilizer application on phosphorus (P) losses from paddy soils in Taihu Lake Region: I. Effect of phosphate fertilizer rate on P losses from paddy soil. Chemosphere 50: 695-701.