Enrichment of a common wheat genetic map and QTL mapping for fatty acid content in grain

Plant Science

Volumn 181, Issue 1, 2011, Pages 65-75

  Wang, Ying ying ^a   Sun, Xian yin ^b   Zhao, Yan ^a   Kong, Fan mei ^a   Guo, Ying ^a   Zhang, Gui zhi ^a   Pu, Yan yan ^a   Wu, Ke ^b   Li, Si shen ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

^b Tai'an Academy of Agricultural Science   (China)

Author keywords

Common wheat; DArT; Fatty acid; Genetic map; Quantitative trait locus; SSR

Indexed keywords

FATTY ACID; MICROSATELLITE DNA;

ARTICLE; CHEMISTRY; CHROMOSOME MAP; EXPRESSED SEQUENCE TAG; GENETIC LINKAGE; GENETIC MARKER; GENETICS; GENOTYPE; PLANT CHROMOSOME; PLANT LEAF; PLANT SEED; QUANTITATIVE TRAIT LOCUS; WHEAT;

CHROMOSOME MAPPING; CHROMOSOMES, PLANT; EXPRESSED SEQUENCE TAGS; FATTY ACIDS; GENETIC LINKAGE; GENETIC MARKERS; GENOTYPE; MICROSATELLITE REPEATS; PLANT LEAVES; QUANTITATIVE TRAIT LOCI; SEEDS; TRITICUM;

TRITICUM AESTIVUM;

EID: 79956000517     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2011.03.020     Document Type: Article

References (39)

1. Gupta P.K., Mir R.R., Mohan A., Kumar J. Wheat genomics: present status and future prospects. Int. J. Plant Genomics 2008, 2008. 10.1155/2008/896451.
2. Akbari M., Wenzl P., Caig V., Carling J., Xia L., Yang S., Uszynski G., Mohler V., Lehmensiek A., Kuchel H., Hayden M.J., Howes N., Sharp P., Vaughan P., Rathmell B., Huttner E., Kilian A. Diversity arrays technology (DArT) for high-throughput profiling of the hexaploid wheat genome. Theor. Appl. Genet. 2006, 113:1409-1420.
3. Semagn K., Bjornstad A., Skinnes H., Maroy A.G., Tarkegne Y., William M. Distribution of DArT, AFLP, and SSR markers in a genetic linkage map of a doubled-haploid hexaploid wheat population. Genome 2006, 49:545-555.
4. Peleg Z., Saranga Y., Suprunova T., Ronin Y., Roder M.S., Kilian A., Korol A.B., Fahima T. High-density genetic map of durum wheat x wild emmer wheat based on SSR and DArT markers. Theor. Appl. Genet. 2008, 117:103-115.
5. Mantovani P., Maccaferri M., Sanguineti M.C., Tuberosa R., Catizone I., Wenzl P., Thomson B., Carling J., Huttner E., DeAmbrogio E., Kilian A. An integrated DArT-SSR linkage map of durum wheat. Mol. Breed. 2008, 22:629-648.
6. Tan M., Sharp P.J., Lu M., Howes N. Genetics of grain dormancy in a white wheat. Aust. J. Agr. Res. 2006, 57:1157-1165.
7. Chung O.K., Pomeranz Y., Finney K.F. Wheat flour lipids in breadmaking. Cereal Chem. 1978, 55:598-618.
8. Chung O.K. Lipid-protein interactions in wheat flour, dough, gluten, and protein fractions. Cereal Foods World 1986, 31:242-256.
9. Tait S.P.C, Galliard T. Effect on baking quality of changes in lipid composition during wholemeal storage. J. Cereal Sci. 1988, 125-137.
10. Castello P., Jollet S., Potus J., Baret J.-L., Nicolas J. Effect of exogenous lipase on dough lipids during mixing of wheat flours. Cereal Chem. 1998, 75:595-601.
11. Panthee D., Pantalone V., Saxton A. Modifier QTL for fatty acid composition in soybean oil. Euphytica 2006, 152:67-73.
12. Zhao J., Dimov Z., Becker H., Ecke W., Möllers C. Mapping QTL controlling fatty acid composition in a doubled haploid rapeseed population segregating for oil content. Mol. Breed. 2008, 21:115-125.
13. Zhang J., Qi C., Pu H., Chen F., Gao J., Chen X., Gu H., Fu S. QTL identification for fatty acid content in Rapeseed (Brassica napus L.). Acta Agron. Sin. 2008, 34:54-60.
14. Billotte N., Jourjon M., Marseillac N., Berger A., Flori A., Asmady H., Adon B., Singh R., Nouy B., Potier F., Cheah S., Rohde W., Ritter E., Courtois B., Charrier A., Mangin B. QTL detection by multi-parent linkage mapping in oil palm (Elaeis guineensis Jacq.). Theor. Appl. Genet. 2010, 120:1673-1687.
15. Singh R., Tan S., Panandam J., Rahman R., Ooi L., Low E.T., Sharma M., Jansen J., Cheah S.C. Mapping quantitative trait loci (QTLs) for fatty acid composition in an interspecific cross of oil palm. BMC Plant Biol. 2009, 9:114.
16. Yang X., Guo Y., Yan J., Zhang J., Song T., Rocheford T., Li J. Major and minor QTL and epistasis contribute to fatty acid compositions and oil concentration in high-oil maize. Theor. Appl. Genet. 2010, 120:665-678.
17. Pomeranz Y., Chung O. The lipid composition of a single wheat kernel and its structural parts. J. Chromatogr. A 1965, 19:540-550.
18. Li S., Jia J., Wei X., Zhang X., Li L., Chen H., Fan Y., Sun H., Zhao X., Lei T., Xu Y., Jiang F., Wang H., Li L. A intervarietal genetic map and QTL analysis for yield traits in wheat. Mol. Breed. 2007, 20:167-178.
19. Sukhija P.S., Palmquist D.L. Rapid method for determination of total fatty acid content and composition of feedstuffs and feces. J. Agric. Food Chem. 1988, 36:1202-1206.
20. Knapp S.J., Stroup W.W., Ross W.M. Exact confidence intervals for heritability on a progeny mean basis. Crop Sci. 1985, 25:192-194.
21. Lander E.S., Green P., Abrahamson J., Barlow A., Daly M.J., Lincoln S.E., Newburg L. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1987, 1:174-181.
22. Francki M.G., Walker E., Crawford A.C., Broughton S., Ohm H.W., Barclay I., Wilson R.E., McLean R. Comparison of genetic and cytogenetic maps of hexaploid wheat (Triticum aestivum L.) using SSR and DArT markers. Mol. Genet. Genomics 2009, 281:181-191.
23. Li L., Wang J., Guo Y., Jiang F., Xu Y., Wang Y., Pan H., Han G., Li R., Li S. Development of SSR markers from ESTs of gramineous species and their chromosome location on wheat. Prog. Nat. Sci. 2009, 18:1485-1490.
24. Kosambi D.D. The estimation of map distances from recombination values. Ann. Eugen. 1944, 12:172-175.
25. Wang D.L., Zhu J., Li Z.K.L., Paterson A.H. Mapping QTLs with epistatic effects and QTL×environment interactions by mixed linear model approaches. Theor. Appl. Genet. 1999, 99:1255-1264.
26. Bagge M., Xia X., Lübberstedt T. Functional markers in wheat. Curr. Opin. Plant Biol. 2007, 10:211-216.
27. Habash D.Z., Bernard S., Schondelmaier J., Weyen J., Quarrie S.A. The genetics of nitrogen use in hexaploid wheat: N utilisation, development and yield, Theor. Appl. Genet. 2007, 114:403-419.
28. Sun H., Lü J., Fan Y., Zhao Y., Kong F., Li R., Wang H., Li S. Quantitative trait loci (QTLs) for quality traits related to protein and starch in wheat. Prog. Nat. Sci. 2008, 18:825-831.
29. Payne P.I., Nightingale M.A., Krattiger A.F., Holt L.M. The relationship between HMW glutenin subunit composition and the bread-making quality of British-grown wheat varieties. J. Sci. Food Agric. 1987, 40:51-65.
30. Eujayl I., Sorrells M.E., Baum M., Wolters P., Powell W. Isolation of EST-derived microsatellite markers for genotyping the A and B genomes of wheat. Theor. Appl. Genet. 2002, 104:399-407.
31. Ohlrogge J., Browseb J. Lipid biosynthesis. Plant Cell 1995, 7:957-970.
32. Beisson F., Koo A.J.K., Ruuska S., Schwender J., Pollard M., Thelen J.J., Paddock T., Salas J.J., Savage L., Milcamps A., Mhaske V.B., Cho Y., Ohlrogge J.B. Arabidopsis genes involved in Acyl Lipid Metabolism. A 2003 census of the candidates, a study of the distribution of expressed sequence tags in organs, and a web-based database. Plant Physiol. 2003, 132:681-697.
33. Lionneton E, Ravera S., Sanchez L., Aubert G., Delourme R., Ochatt S. Development of an AFLP-based linkage map and localization of QTLs for seed fatty acid content in condiment mustard (Brassica juncea). Genome 2002, 45:1203-1215.
34. Perez-Vich B., Fernandez-Martinez J., Grondona M., Knapp S., Berry S. Stearoyl-ACP and oleoyl-PC desaturase genes cosegregate with quantitative trait loci underlying high stearic and high oleic acid mutant phenotypes in sunflower. Theor. Appl. Genet. 2002, 104:338-349.
35. Mikkilineni V., Rocheford T.R. Sequence variation and genomic organization of fatty acid desaturase-2 (fad2) and fatty acid desaturase-6 (fad6) cDNAs in maize. Theor. Appl. Genet. 2003, 106:1326-1332.
36. Groos C., Robert N., Bervas E., Charmet G. Genetic analysis of grain protein-content, grain yield and thousand-kernel weight in bread wheat. Theor. Appl. Genet. 2003, 106:1032-1040.
37. Quarrie S.A., Steed A., Calestani C., Semikhodskii A., Lebreton C., Chinoy C., Steele N., Pljevljakusic D., Waterman E., Weyen J., Schondelmaier J., Habash D.Z., Farmer P., Saker L., Clarkson D.T., Abugalieva A., Yessimbekova M., Turuspekov Y., Abugalieva S., Tuberosa R., Sanguineti M.C., Hollington P.A., Aragues R., Royo A., Dodig D. A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese Spring×SQ1 and its use to compare QTLs for grain yield across a range of environments. Theor. Appl. Genet. 2005, 110:865-880.
38. Marza F., Bai G.H., Carver B.F., Zhou W.C. Quantitative trait loci for yield and related traits in the wheat population Ning7840×Clark. Theor. Appl. Genet. 2006, 112:688-698.
39. Veldboom L.R., Lee M. Genetic Mapping of Quantitative Trait Loci in Maize in Stress and Nonstress Environments: II. Plant Height and Flowering 1996, Crop Science Society of America, Madison, WI, Etats-Unis.