-
1
-
-
84874552003
-
-
WHO, Available:. Accessed 6 April 2012
-
WHO (2010) HCV: surveillance and control. Available: http://www.who.int/csr/disease/hepatitis/whocdscsrlyo2003/en/index4.html. Accessed 6 April 2012.
-
(2010)
HCV: Surveillance and control
-
-
-
2
-
-
77952180871
-
Hepatocellular carcinoma - United States, 2001-2006
-
CDC
-
CDC (2010) Hepatocellular carcinoma- United States, 2001-2006. MMWR Morb Mortal Wkly Rep 59: 517-552.
-
(2010)
MMWR Morb Mortal Wkly Rep
, vol.59
, pp. 517-552
-
-
-
3
-
-
58149388300
-
Naturally occurring dominant resistance mutations to hepatitis C virus protease and polymerase inhibitors in treatment-naïve patients
-
Kuntzen T, Timm J, Berical A, Lennon N, Berlin AM, et al. (2008) Naturally occurring dominant resistance mutations to hepatitis C virus protease and polymerase inhibitors in treatment-naïve patients. Hepatology 48: 1769-1778.
-
(2008)
Hepatology
, vol.48
, pp. 1769-1778
-
-
Kuntzen, T.1
Timm, J.2
Berical, A.3
Lennon, N.4
Berlin, A.M.5
-
4
-
-
0034646996
-
The outcome of acute hepatitis C predicted by the evolution of the viral quasispecies
-
Farci P, Shimoda A, Coiana A, Diaz G, Peddis G, et al. (2000) The outcome of acute hepatitis C predicted by the evolution of the viral quasispecies. Science 288: 339-344.
-
(2000)
Science
, vol.288
, pp. 339-344
-
-
Farci, P.1
Shimoda, A.2
Coiana, A.3
Diaz, G.4
Peddis, G.5
-
5
-
-
79955800187
-
Predicting spontaneous clearance of acute hepatitis C virus in a large cohort of HIV-1-infected men
-
Thomson EC, Fleming VM, Main J, Klenerman P, Weber J, et al. (2011) Predicting spontaneous clearance of acute hepatitis C virus in a large cohort of HIV-1-infected men. Gut 60: 837-845.
-
(2011)
Gut
, vol.60
, pp. 837-845
-
-
Thomson, E.C.1
Fleming, V.M.2
Main, J.3
Klenerman, P.4
Weber, J.5
-
6
-
-
34447248989
-
Hepatitis C virus dynamics during natural infection are associated with long-term histological outcome of chronic hepatitis C disease
-
Sullivan D, Bruden D, Deubner H, McArdle S, Chung M, et al. (2007) Hepatitis C virus dynamics during natural infection are associated with long-term histological outcome of chronic hepatitis C disease. J Infect Dis 196: 239-248.
-
(2007)
J Infect Dis
, vol.196
, pp. 239-248
-
-
Sullivan, D.1
Bruden, D.2
Deubner, H.3
McArdle, S.4
Chung, M.5
-
7
-
-
33744812765
-
Evolution of hepatitis C viral quasispecies and hepatic injury in perinatally infected children followed prospectively
-
Farci P, Quinti I, Farci S, Alter HJ, Strazzera R, et al. (2006) Evolution of hepatitis C viral quasispecies and hepatic injury in perinatally infected children followed prospectively. Proc Natl Acad Sci U S A 103: 8475-8480.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 8475-8480
-
-
Farci, P.1
Quinti, I.2
Farci, S.3
Alter, H.J.4
Strazzera, R.5
-
8
-
-
33645363859
-
Hepatitis C virus-specific immune responses and quasi-species variability at baseline are associated with nonresponse to antiviral therapy during advanced hepatitis C
-
Morishima C, Polyak SJ, Ray R, Doherty MC, Di Bisceglie AM, et al. (2006) Hepatitis C virus-specific immune responses and quasi-species variability at baseline are associated with nonresponse to antiviral therapy during advanced hepatitis C. J Infect Dis 193: 931-940.
-
(2006)
J Infect Dis
, vol.193
, pp. 931-940
-
-
Morishima, C.1
Polyak, S.J.2
Ray, R.3
Doherty, M.C.4
Di Bisceglie, A.M.5
-
9
-
-
0026682501
-
Estimating effective population size from samples of sequences: inefficiency of pairwise and segregating sites as compared to phylogenetic estimates
-
Felsenstein J, (1992) Estimating effective population size from samples of sequences: inefficiency of pairwise and segregating sites as compared to phylogenetic estimates. Genet Res 59: 139-147.
-
(1992)
Genet Res
, vol.59
, pp. 139-147
-
-
Felsenstein, J.1
-
10
-
-
0024283666
-
Loss of information in genetic distances
-
Steel MA, Hendy MD, Penny D, (1988) Loss of information in genetic distances. Nature 336: 118.
-
(1988)
Nature
, vol.336
, pp. 118
-
-
Steel, M.A.1
Hendy, M.D.2
Penny, D.3
-
11
-
-
33750297873
-
HIV evolutionary dynamics within and among hosts
-
Lemey P, Rambaut A, Pybus OG, (2006) HIV evolutionary dynamics within and among hosts. AIDS Rev 8: 125-140.
-
(2006)
AIDS Rev
, vol.8
, pp. 125-140
-
-
Lemey, P.1
Rambaut, A.2
Pybus, O.G.3
-
12
-
-
11444265823
-
Germs, genomes and genealogies
-
Wilson DJ, Falush D, McVean G, (2005) Germs, genomes and genealogies. Trends Ecol Evol 20: 39-45.
-
(2005)
Trends Ecol Evol
, vol.20
, pp. 39-45
-
-
Wilson, D.J.1
Falush, D.2
McVean, G.3
-
13
-
-
78650407546
-
Dynamic coinfection with multiple viral subtypes in acute hepatitis C
-
Smith JA, Aberle JH, Fleming VM, Ferenci P, Thomson EC, et al. (2010) Dynamic coinfection with multiple viral subtypes in acute hepatitis C. J Infect Dis 202: 1770-1779.
-
(2010)
J Infect Dis
, vol.202
, pp. 1770-1779
-
-
Smith, J.A.1
Aberle, J.H.2
Fleming, V.M.3
Ferenci, P.4
Thomson, E.C.5
-
14
-
-
26244458950
-
Intra-host evolutionary dynamics of hepatitis C virus E2 in treated patients
-
Alfonso V, Mbayed VA, Sookoian S, Campos RH, (2005) Intra-host evolutionary dynamics of hepatitis C virus E2 in treated patients. J Gen Virol 86: 2781-2786.
-
(2005)
J Gen Virol
, vol.86
, pp. 2781-2786
-
-
Alfonso, V.1
Mbayed, V.A.2
Sookoian, S.3
Campos, R.H.4
-
15
-
-
43249089764
-
Hepatitis C virus envelope glycoprotein co-evolutionary dynamics during chronic hepatitis C
-
Li H, McMahon BJ, McArdle S, Bruden D, Sullivan DG, et al. (2008) Hepatitis C virus envelope glycoprotein co-evolutionary dynamics during chronic hepatitis C. Virology 375: 580-591.
-
(2008)
Virology
, vol.375
, pp. 580-591
-
-
Li, H.1
McMahon, B.J.2
McArdle, S.3
Bruden, D.4
Sullivan, D.G.5
-
16
-
-
34249946266
-
Progression of fibrosis during chronic hepatitis C is associated with rapid virus evolution
-
Wang X, Netski DM, Astemborski J, Mehta SH, Torbenson MS, Thomas DL, et al. (2007) Progression of fibrosis during chronic hepatitis C is associated with rapid virus evolution. J Virol 81: 6513-6522.
-
(2007)
J Virol
, vol.81
, pp. 6513-6522
-
-
Wang, X.1
Netski, D.M.2
Astemborski, J.3
Mehta, S.H.4
Torbenson, M.S.5
Thomas, D.L.6
-
17
-
-
79960848222
-
Temporal variations in the hepatitis C virus intrahost population during chronic infection
-
Ramachandran S, Campo DS, Dimitrova ZE, Xia GL, Purdy MA, et al. (2011) Temporal variations in the hepatitis C virus intrahost population during chronic infection. J Virol 85: 6369-6380.
-
(2011)
J Virol
, vol.85
, pp. 6369-6380
-
-
Ramachandran, S.1
Campo, D.S.2
Dimitrova, Z.E.3
Xia, G.L.4
Purdy, M.A.5
-
18
-
-
79961181997
-
Hepatitis C virus infection causes cell cycle arrest at the level of initiation of mitosis
-
Kannan RP, Hensley LL, Evers LE, Lemon SM, McGivern DR, et al. (2011) Hepatitis C virus infection causes cell cycle arrest at the level of initiation of mitosis. J Virol 85: 7989-8001.
-
(2011)
J Virol
, vol.85
, pp. 7989-8001
-
-
Kannan, R.P.1
Hensley, L.L.2
Evers, L.E.3
Lemon, S.M.4
McGivern, D.R.5
-
19
-
-
0032475822
-
Hepatitis C viral dynamics in vivo and the antiviral efficacy of interferon-alpha therapy
-
Neumann AU, Lam NP, Dahari H, Gretch DR, Wiley TE, et al. (1998) Hepatitis C viral dynamics in vivo and the antiviral efficacy of interferon-alpha therapy. Science 282: 103-107.
-
(1998)
Science
, vol.282
, pp. 103-107
-
-
Neumann, A.U.1
Lam, N.P.2
Dahari, H.3
Gretch, D.R.4
Wiley, T.E.5
-
20
-
-
79955998952
-
The mode and tempo of hepatitis C virus evolution within and among hosts
-
Gray RR, Parker J, Lemey P, Salemi M, Katzourakis A, et al. (2011) The mode and tempo of hepatitis C virus evolution within and among hosts. BMC Evol Biol 11: 131.
-
(2011)
BMC Evol Biol
, vol.11
, pp. 131
-
-
Gray, R.R.1
Parker, J.2
Lemey, P.3
Salemi, M.4
Katzourakis, A.5
-
21
-
-
70349423481
-
Visualizing hepatitis C virus infections in human liver by two-photon microscopy
-
Liang Y, Shilagard T, Xiao SY, Snyder N, Lau D, et al. (2009) Visualizing hepatitis C virus infections in human liver by two-photon microscopy. Gastroenterology 137: 1448-1458.
-
(2009)
Gastroenterology
, vol.137
, pp. 1448-1458
-
-
Liang, Y.1
Shilagard, T.2
Xiao, S.Y.3
Snyder, N.4
Lau, D.5
-
22
-
-
78650048403
-
Neutralizing antibody-resistant hepatitis C virus cell-to-cell transmission
-
Brimacombe CL, Grove J, Meredith LW, Hu K, Syder AJ, et al. (2011) Neutralizing antibody-resistant hepatitis C virus cell-to-cell transmission. J Virol 85: 596-605.
-
(2011)
J Virol
, vol.85
, pp. 596-605
-
-
Brimacombe, C.L.1
Grove, J.2
Meredith, L.W.3
Hu, K.4
Syder, A.J.5
-
23
-
-
68949201638
-
Focal distribution of hepatitis C virus RNA in infected livers
-
Stiffler JD, Nguyen M, Sohn JA, Liu C, Kaplan D, et al. (2009) Focal distribution of hepatitis C virus RNA in infected livers. PLoS ONE 4: e6661.
-
(2009)
PLoS ONE
, vol.4
-
-
Stiffler, J.D.1
Nguyen, M.2
Sohn, J.A.3
Liu, C.4
Kaplan, D.5
-
24
-
-
37749010468
-
Distinct hepatitis C virus core and F protein quasispecies in tumoral and nontumoral hepatocytes isolated via microdissection
-
Sobesky R, Feray C, Rimlinger F, Derian N, Dos Santos A, et al. (2007) Distinct hepatitis C virus core and F protein quasispecies in tumoral and nontumoral hepatocytes isolated via microdissection. Hepatology 46: 1704-1712.
-
(2007)
Hepatology
, vol.46
, pp. 1704-1712
-
-
Sobesky, R.1
Feray, C.2
Rimlinger, F.3
Derian, N.4
Dos Santos, A.5
-
25
-
-
0034089003
-
Hepatitis C virus in lymphoid cells of patients coinfected with human immunodeficiency virus type 1: evidence of active replication in monocytes/macrophages and lymphocytes
-
Laskus T, Radkowski M, Piasek A, Nowicki M, Horban A, et al. (2000) Hepatitis C virus in lymphoid cells of patients coinfected with human immunodeficiency virus type 1: evidence of active replication in monocytes/macrophages and lymphocytes. J Infect Dis 181: 442-448.
-
(2000)
J Infect Dis
, vol.181
, pp. 442-448
-
-
Laskus, T.1
Radkowski, M.2
Piasek, A.3
Nowicki, M.4
Horban, A.5
-
26
-
-
33845645565
-
Negative-strand hepatitis C virus (HCV) RNA in peripheral blood mononuclear cells from anti-HCV-positive/HIV-infected women
-
Laskus T, Operskalski EA, Radkowski M, Wilkinson J, Mack WJ, et al. (2007) Negative-strand hepatitis C virus (HCV) RNA in peripheral blood mononuclear cells from anti-HCV-positive/HIV-infected women. J Infect Dis 195: 124-133.
-
(2007)
J Infect Dis
, vol.195
, pp. 124-133
-
-
Laskus, T.1
Operskalski, E.A.2
Radkowski, M.3
Wilkinson, J.4
Mack, W.J.5
-
27
-
-
0036137799
-
Search for hepatitis C virus negative-strand RNA sequences and analysis of viral sequences in the central nervous system: evidence of replication
-
Radkowski M, Wilkinson J, Nowicki M, Adair D, Vargas H, et al. (2002) Search for hepatitis C virus negative-strand RNA sequences and analysis of viral sequences in the central nervous system: evidence of replication. J Virol 76: 600-608.
-
(2002)
J Virol
, vol.76
, pp. 600-608
-
-
Radkowski, M.1
Wilkinson, J.2
Nowicki, M.3
Adair, D.4
Vargas, H.5
-
28
-
-
1542410277
-
Frequent compartmentalization of hepatitis C virus variants in circulating B cells and monocytes
-
Ducoulombier D, Roque-Alfonso AM, Di Liberto G, Penin F, Kara R, et al. (2004) Frequent compartmentalization of hepatitis C virus variants in circulating B cells and monocytes. Hepatology 39: 817-825.
-
(2004)
Hepatology
, vol.39
, pp. 817-825
-
-
Ducoulombier, D.1
Roque-Alfonso, A.M.2
Di Liberto, G.3
Penin, F.4
Kara, R.5
-
29
-
-
18144379843
-
Compartmentalization of hepatitis C virus genotypes between plasma and peripheral blood mononuclear cells
-
Roque-Afonso AM, Ducoulombier D, Di Liberto G, Kara R, Gigou M, et al. (2005) Compartmentalization of hepatitis C virus genotypes between plasma and peripheral blood mononuclear cells. J Virol 79: 6349-6357.
-
(2005)
J Virol
, vol.79
, pp. 6349-6357
-
-
Roque-Afonso, A.M.1
Ducoulombier, D.2
Di Liberto, G.3
Kara, R.4
Gigou, M.5
-
30
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
31
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K, Dudkley J, Nei M, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudkley, J.2
Nei, M.3
Kumar, S.4
-
32
-
-
17744381574
-
Bayesian coalescent inference of past population dynamics from molecular sequences
-
Drummond AJ, Rambaut A, Shapiro B, Pybus OG, (2005) Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol 22: 1185-1192.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1185-1192
-
-
Drummond, A.J.1
Rambaut, A.2
Shapiro, B.3
Pybus, O.G.4
|