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HCV genotypes were determined by a modification of the nested PCR procedure of Okamoto et al. [J. Gen. Virol. 73, 673, (1992)] and confirmed by restriction fragment length polymorphism analysis of the 5′ noncoding region.
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Okamoto1
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unpublished data
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Standard criteria for inclusion and exclusion of patients to IFN treatment were applied. Informed consent was obtained from all patients after the nature and the possible consequences of the study were explained to them. Data from four patients who were nonresponders were not used (Table 1), because their dynamics could not be fit with the same model as the responding patients. Detailed clinical information on these patients will be given separately (N. P. Lam et al., unpublished data).
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Lam, N.P.1
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17
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3543089839
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note
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Six of the patients who received 10 mIU (2A to 2F) had treatment discontinued for 1 week before they continued on the 5-mIU daily regime.
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18
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3543085131
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note
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All serum samples (collected 0, 2, 4, 7, 10, 14, 19, and 24 hours after the first injection of IFN on day 0; 5, 10, and 24 hours after the second injection on day 1; and days 2, 3, 4, 5, 7, 9, 11, 12, and 14 before IFN injection) were separated from whole blood within 2 to 4 hours of venipuncture, divided into aliquots, and stored at -70°C.
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20
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0030695103
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6 copies per milliliter in all samples of the period analyzed.
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Tong, M.J.1
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note
-
The nonparametric Wilcoxon rank sum test was used to determine statistical significance of differences in viral fraction and slopes between dosing groups. The Spearman nonparametric test was used to assess the correlation between continuous variables. Significance was established at P < 0.03.
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22
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3543092136
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note
-
max) - can be used without significantly changing the results presented here.
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23
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3543140121
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note
-
1/2 = ln(2)/C′, where c and ε are given in Table 1.
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24
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3543071141
-
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note
-
0 = sp/cδ - d/δ.
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26
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84964203940
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-
The logarithm of Eq. 4 (or Eq. 5 as appropriate) was fit to the logarithm of the viral load data by a nonlinear least-squares method using the DNLS1 subroutine from the Common Los Alamos Software Library, which is based on a finite-difference Levenberg-Marquardt algorithm. Fits were made separately to the bDNA and to the Superquant viral load data wherever possible (12), and the average of the parameter estimates was reported. Standard errors were calculated by a bootstrap method [B. Efron and R. Tibshirani, Stat. Sci. 1, 54 (1986)] in which experiments were simulated 100 times.
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3543072329
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note
-
In Lam et al. (6) this delay was not noticed, probably because of less frequent sampling.
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0001925425
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T. Boyer and D. Zakim, Eds. Saunders, Philadelphia, ed. 3
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note
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2 ≈ εδ, and A ≈ ε.
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Polyak, S.J.1
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45
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3543112084
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note
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We thank the patients for their participation in the study, B. Goldstein for the use of his nonlinear fitting package, and A. Talal and J. M. Pawlotsky for helpful discussions. Portions of this work were performed under the auspices of the U.S. Department of Energy. Supported by the committee for the advancement of research of Bar-Ilan University; the Santa Fe Institute; Schering Plough Corporation, Kenilworth, NJ; the Joseph P. Sullivan and Jeanne M. Sullivan Foundation; and NIH grants RR06555, A1/DK41320-2, and A139049-2.
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