-
1
-
-
35948955219
-
Exploring the structural diversity of mammalian carbohydrates ("glycospace") by statistical databank analysis
-
DOI 10.1021/cb700178s
-
Werz, D. B., Ranzinger, R., Herget, S., Adibekian, A., von der Lieth, C. W., and Seeberger, P. H. (2007) Exploring the structural diversity of mammalian carbohydrates ("glycospace") by statistical databank analysis ACS Chem. Biol. 2, 685-691 (Pubitemid 350066017)
-
(2007)
ACS Chemical Biology
, vol.2
, Issue.10
, pp. 685-691
-
-
Werz, D.B.1
Ranzinger, R.2
Herget, S.3
Adibekian, A.4
Von Der Lieth, C.-W.5
Seeberger, P.H.6
-
2
-
-
79955591912
-
Comparative bioinformatics analysis of the mammalian and bacterial glycomes
-
Adibekian, A., Stallforth, P., Hecht, M.-L., Werz, D. B., Gagneux, P., and Seeberger, P. H. (2011) Comparative bioinformatics analysis of the mammalian and bacterial glycomes Chem. Sci. 2, 337-344
-
(2011)
Chem. Sci.
, vol.2
, pp. 337-344
-
-
Adibekian, A.1
Stallforth, P.2
Hecht, M.-L.3
Werz, D.B.4
Gagneux, P.5
Seeberger, P.H.6
-
3
-
-
0028607322
-
12 structures for a reducing hexasaccharide: The Isomer Barrier to development of single-method saccharide sequencing or synthesis systems
-
12 structures for a reducing hexasaccharide: the Isomer Barrier to development of single-method saccharide sequencing or synthesis systems Glycobiology 4, 759-767
-
(1994)
Glycobiology
, vol.4
, pp. 759-767
-
-
Laine, R.A.1
-
4
-
-
0004106191
-
-
2 nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Varki, A. (2009) Essentials of Glycobiology, 2 nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(2009)
Essentials of Glycobiology
-
-
Varki, A.1
-
5
-
-
79959464070
-
Glycan microarrays for decoding the glycome
-
Rillahan, C. D. and Paulson, J. C. (2011) Glycan microarrays for decoding the glycome Annu. Rev. Biochem. 80, 797-823
-
(2011)
Annu. Rev. Biochem.
, vol.80
, pp. 797-823
-
-
Rillahan, C.D.1
Paulson, J.C.2
-
6
-
-
0028953765
-
Measuring diversity: Experimental design of combinatorial libraries for drug discovery
-
Martin, E. J., Blaney, J. M., Siani, M. A., Spellmeyer, D. C., Wong, A. K., and Moos, W. H. (1995) Measuring diversity: experimental design of combinatorial libraries for drug discovery J. Med. Chem. 38, 1431-1436
-
(1995)
J. Med. Chem.
, vol.38
, pp. 1431-1436
-
-
Martin, E.J.1
Blaney, J.M.2
Siani, M.A.3
Spellmeyer, D.C.4
Wong, A.K.5
Moos, W.H.6
-
8
-
-
0002647926
-
Rapid quantification of molecular diversity for selective database acquisition
-
Turner, D. B., Tyrrell, S. M., and Willett, P. (1997) Rapid quantification of molecular diversity for selective database acquisition J. Chem. Inf. Comput. Sci. 37, 18-22 (Pubitemid 127601575)
-
(1997)
Journal of Chemical Information and Computer Sciences
, vol.37
, Issue.1
, pp. 18-22
-
-
Turner, D.B.1
Tyrrell, S.M.2
Willett, P.3
-
9
-
-
3042799070
-
A Planning Strategy for Diversity-Oriented Synthesis
-
DOI 10.1002/anie.200300626
-
Burke, M. D. and Schreiber, S. L. (2004) A planning strategy for diversity-oriented synthesis Angew. Chem., Int. Ed. 43, 46-58 (Pubitemid 38063470)
-
(2004)
Angewandte Chemie - International Edition
, vol.43
, Issue.1
, pp. 46-58
-
-
Burke, M.D.1
Schreiber, S.L.2
-
10
-
-
0010037175
-
Graph theoretical approach to recognition of structural similarity in molecules
-
Randic, M. and Wilkins, C. L. (1979) Graph theoretical approach to recognition of structural similarity in molecules J. Chem. Inf. Comput. Sci. 19, 31-37
-
(1979)
J. Chem. Inf. Comput. Sci.
, vol.19
, pp. 31-37
-
-
Randic, M.1
Wilkins, C.L.2
-
11
-
-
5244364312
-
The information content of 2D and 3D structural descriptors relevant to ligand-receptor binding
-
Brown, R. D. and Martin, Y. C. (1997) The information content of 2D and 3D structural descriptors relevant to ligand-receptor binding J. Chem. Inf. Comput. Sci. 37, 1-9 (Pubitemid 127601574)
-
(1997)
Journal of Chemical Information and Computer Sciences
, vol.37
, Issue.1
, pp. 1-9
-
-
Brown, R.D.1
Martin, Y.C.2
-
12
-
-
0004117251
-
-
Daylight Chemical Information Systems, Inc, Irvine, CA
-
James, C. A. and Weininger, D. (1994) Daylight Theory Manual, Daylight Chemical Information Systems, Inc, Irvine, CA.
-
(1994)
Daylight Theory Manual
-
-
James, C.A.1
Weininger, D.2
-
13
-
-
0037361940
-
Similarity searching using reduced graphs
-
Gillet, V. J., Willett, P., and Bradshaw, J. (2003) Similarity searching using reduced graphs J. Chem. Inf. Comput. Sci. 43, 338-345
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, pp. 338-345
-
-
Gillet, V.J.1
Willett, P.2
Bradshaw, J.3
-
14
-
-
17444374965
-
A score matrix to reveal the hidden links in glycans
-
DOI 10.1093/bioinformatics/bti193
-
Aoki, K. F., Mamitsuka, H., Akutsu, T., and Kanehisa, M. (2005) A score matrix to reveal the hidden links in glycans Bioinformatics 21, 1457-1463 (Pubitemid 40542701)
-
(2005)
Bioinformatics
, vol.21
, Issue.8
, pp. 1457-1463
-
-
Aoki, K.F.1
Mamitsuka, H.2
Akutsu, T.3
Kanehisa, M.4
-
15
-
-
34250219954
-
A gram distribution kernel applied to glycan classification and motif extraction
-
Kuboyama, T., Hirata, K., Aoki-Kinoshita, K. F., Kashima, H., and Yasuda, H. (2006) A gram distribution kernel applied to glycan classification and motif extraction Genome Inform. 17, 25-34
-
(2006)
Genome Inform.
, vol.17
, pp. 25-34
-
-
Kuboyama, T.1
Hirata, K.2
Aoki-Kinoshita, K.F.3
Kashima, H.4
Yasuda, H.5
-
16
-
-
71049172430
-
Glycome-DB.org: A portal for querying across the digital world of carbohydrate sequences
-
Ranzinger, R., Frank, M., von der Lieth, C. W., and Herget, S. (2009) Glycome-DB.org: a portal for querying across the digital world of carbohydrate sequences Glycobiology 19, 1563-1567
-
(2009)
Glycobiology
, vol.19
, pp. 1563-1567
-
-
Ranzinger, R.1
Frank, M.2
Von Der Lieth, C.W.3
Herget, S.4
-
17
-
-
0037835585
-
Analysis and display of the size dependence of chemical similarity coefficients
-
Holliday, J. D., Salim, N., Whittle, M., and Willett, P. (2003) Analysis and display of the size dependence of chemical similarity coefficients J. Chem. Inf. Comput. Sci. 43, 819-828
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, pp. 819-828
-
-
Holliday, J.D.1
Salim, N.2
Whittle, M.3
Willett, P.4
-
18
-
-
0036567220
-
A modification of the Jaccard-Tanimoto similarity index for diverse selection of chemical compounds using binary strings
-
DOI 10.1198/004017002317375064
-
Fligner, M. A., Verducci, J. S., and Blower, P. (2002) A modification of the Jaccard-Tanimoto similarity index for diverse selection of chemical compounds using binary strings Technometrics 44, 110-119 (Pubitemid 34537163)
-
(2002)
Technometrics
, vol.44
, Issue.2
, pp. 110-119
-
-
Fligner, M.A.1
Verducci, J.S.2
Blower, P.E.3
-
19
-
-
0345863935
-
The KEGG resource for deciphering the genome
-
Kanehisa, M., Goto, S., Kawashima, S., Okuno, Y., and Hattori, M. (2004) The KEGG resource for deciphering the genome Nucleic Acids Res. 32, D277-280
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 277-280
-
-
Kanehisa, M.1
Goto, S.2
Kawashima, S.3
Okuno, Y.4
Hattori, M.5
-
20
-
-
77952369047
-
Colloquium paper: Uniquely human evolution of sialic acid genetics and biology
-
Varki, A. (2010) Colloquium paper: uniquely human evolution of sialic acid genetics and biology Proc. Natl. Acad. Sci. U.S.A. 107 (Suppl 2) 8939-8946
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, Issue.SUPPL. 2
, pp. 8939-8946
-
-
Varki, A.1
-
21
-
-
0029783934
-
Neighborhood behavior: A useful concept for validation of 'molecular diversity' descriptors
-
DOI 10.1021/jm960290n
-
Patterson, D. E., Cramer, R. D., Ferguson, A. M., Clark, R. D., and Weinberger, L. E. (1996) Neighborhood behavior: a useful concept for validation of "molecular diversity" descriptors J. Med. Chem. 39, 3049-3059 (Pubitemid 26260310)
-
(1996)
Journal of Medicinal Chemistry
, vol.39
, Issue.16
, pp. 3049-3059
-
-
Patterson, D.E.1
Cramer, R.D.2
Ferguson, A.M.3
Clark, R.D.4
Weinberger, L.E.5
-
22
-
-
77958514624
-
Differential receptor binding affinities of influenza hemagglutinins on glycan arrays
-
Liao, H. Y., Hsu, C. H., Wang, S. C., Liang, C. H., Yen, H. Y., Su, C. Y., Chen, C. H., Jan, J. T., Ren, C. T., Cheng, T. J., Wu, C. Y., and Wong, C. H. (2010) Differential receptor binding affinities of influenza hemagglutinins on glycan arrays J. Am. Chem. Soc. 132, 14849-14856
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 14849-14856
-
-
Liao, H.Y.1
Hsu, C.H.2
Wang, S.C.3
Liang, C.H.4
Yen, H.Y.5
Su, C.Y.6
Chen, C.H.7
Jan, J.T.8
Ren, C.T.9
Cheng, T.J.10
Wu, C.Y.11
Wong, C.H.12
-
23
-
-
70249103855
-
Receptor-binding specificity of pandemic influenza A (H1N1) 2009 virus determined by carbohydrate microarray
-
Childs, R. A., Palma, A. S., Wharton, S., Matrosovich, T., Liu, Y., Chai, W., Campanero-Rhodes, M. A., Zhang, Y., Eickmann, M., Kiso, M., Hay, A., Matrosovich, M., and Feizi, T. (2009) Receptor-binding specificity of pandemic influenza A (H1N1) 2009 virus determined by carbohydrate microarray Nat. Biotechnol. 27, 797-799
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 797-799
-
-
Childs, R.A.1
Palma, A.S.2
Wharton, S.3
Matrosovich, T.4
Liu, Y.5
Chai, W.6
Campanero-Rhodes, M.A.7
Zhang, Y.8
Eickmann, M.9
Kiso, M.10
Hay, A.11
Matrosovich, M.12
Feizi, T.13
-
24
-
-
84860859520
-
Recognition of sialylated poly-LacNAc on N- and O-linked glycans by human and avian influenza A virus hemagglutinins
-
10.1002/anie.201200596 and 10.1002/ange.201200596
-
Nycholat, C. M., McBride, R., Ekiert, D. C., Xu, R., Rangarajan, J., Peng, W., Razi, N., Gilbert, M., Wakarchuk, W., Wilson, I. A., and Paulson, J. C. (2012) Recognition of sialylated poly-LacNAc on N- and O-linked glycans by human and avian influenza A virus hemagglutinins Angewandte Chemie 10.1002/anie.201200596 and 10.1002/ange.201200596
-
(2012)
Angewandte Chemie
-
-
Nycholat, C.M.1
McBride, R.2
Ekiert, D.C.3
Xu, R.4
Rangarajan, J.5
Peng, W.6
Razi, N.7
Gilbert, M.8
Wakarchuk, W.9
Wilson, I.A.10
Paulson, J.C.11
-
25
-
-
84856875534
-
Structural characterization of the hemagglutinin receptor specificity from the 2009 H1N1 influenza pandemic
-
Xu, R., McBride, R., Nycholat, C. M., Paulson, J. C., and Wilson, I. A. (2012) Structural characterization of the hemagglutinin receptor specificity from the 2009 H1N1 influenza pandemic J. Virol. 86, 982-990
-
(2012)
J. Virol.
, vol.86
, pp. 982-990
-
-
Xu, R.1
McBride, R.2
Nycholat, C.M.3
Paulson, J.C.4
Wilson, I.A.5
-
26
-
-
45049086740
-
GlycoCT-A unifying sequence format for carbohydrates
-
Herget, S., Ranzinger, R., Maass, K., and Lieth, C. W. (2008) GlycoCT-a unifying sequence format for carbohydrates Carbohydr. Res. 343, 2162-2171
-
(2008)
Carbohydr. Res.
, vol.343
, pp. 2162-2171
-
-
Herget, S.1
Ranzinger, R.2
Maass, K.3
Lieth, C.W.4
-
27
-
-
28444485613
-
GLYDE - An expressive XML standard for the representation of glycan structure
-
DOI 10.1016/j.carres.2005.09.019, PII S000862150500443X
-
Sahoo, S. S., Thomas, C., Sheth, A., Henson, C., and York, W. S. (2005) GLYDE-an expressive XML standard for the representation of glycan structure Carbohydr. Res. 340, 2802-2807 (Pubitemid 41735367)
-
(2005)
Carbohydrate Research
, vol.340
, Issue.18
, pp. 2802-2807
-
-
Sahoo, S.S.1
Thomas, C.2
Sheth, A.3
Henson, C.4
York, W.S.5
-
28
-
-
17444418684
-
The carbohydrate sequence markup language (CabosML): An XML description of carbohydrate structures
-
DOI 10.1093/bioinformatics/bti152
-
Kikuchi, N., Kameyama, A., Nakaya, S., Ito, H., Sato, T., Shikanai, T., Takahashi, Y., and Narimatsu, H. (2005) The carbohydrate sequence markup language (CabosML): an XML description of carbohydrate structures Bioinformatics 21, 1717-1718 (Pubitemid 40542741)
-
(2005)
Bioinformatics
, vol.21
, Issue.8
, pp. 1717-1718
-
-
Kikuchi, N.1
Kameyama, A.2
Nakaya, S.3
Ito, H.4
Sato, T.5
Shikanai, T.6
Takahashi, Y.7
Narimatsu, H.8
-
30
-
-
0030807655
-
BIONJ: An improved version of the NJ algorithm based on a simple model of sequence data
-
Gascuel, O. (1997) BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data Mol. Biol. Evol. 14, 685-695 (Pubitemid 27287289)
-
(1997)
Molecular Biology and Evolution
, vol.14
, Issue.7
, pp. 685-695
-
-
Gascuel, O.1
-
31
-
-
84862070291
-
-
PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author, Department of Genetics, University of Washington, Seattle
-
Felsenstein, J. (1993) PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author, Department of Genetics, University of Washington, Seattle.
-
(1993)
-
-
Felsenstein, J.1
-
32
-
-
77955910535
-
Pyevolve: A Python open-source framework for genetic algorithms
-
Perone, C. S. (2009) Pyevolve: a Python open-source framework for genetic algorithms ACM SIGEVOlution 4, 12-20
-
(2009)
ACM SIGEVOlution
, vol.4
, pp. 12-20
-
-
Perone, C.S.1
|