메뉴 건너뛰기




Volumn 7, Issue 6, 2012, Pages

Phycodnavirus potassium ion channel proteins question the virus molecular piracy hypothesis

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; POTASSIUM CHANNEL; VIRUS PROTEIN;

EID: 84862004166     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0038826     Document Type: Article
Times cited : (14)

References (50)
  • 1
    • 0037133750 scopus 로고    scopus 로고
    • Viral ion channels: structure and function
    • Fischer WB, MS Sansom, (2002) Viral ion channels: structure and function. Biochim Biophys Acta 1561: 27-45.
    • (2002) Biochim Biophys Acta , vol.1561 , pp. 27-45
    • Fischer, W.B.1    Sansom, M.S.2
  • 2
    • 4444294938 scopus 로고    scopus 로고
    • The ion channels coded by viruses
    • Ciampor F, (2003) The ion channels coded by viruses. Acta Microbiol. Immunol. Hung. 50: 433-442.
    • (2003) Acta Microbiol. Immunol. Hung , vol.50 , pp. 433-442
    • Ciampor, F.1
  • 4
    • 78650273127 scopus 로고    scopus 로고
    • Minimal art: or why small viral K+ channels are good tools for understanding basic structure and function relations
    • Thiel G, Baumeister D, Schroeder I, Kast SM, Van Etten JL, et al. (2011) Minimal art: or why small viral K+ channels are good tools for understanding basic structure and function relations. Biochim Biophys Acta 1808: 580-588.
    • (2011) Biochim Biophys Acta , vol.1808 , pp. 580-588
    • Thiel, G.1    Baumeister, D.2    Schroeder, I.3    Kast, S.M.4    Van Etten, J.L.5
  • 5
    • 1942502838 scopus 로고    scopus 로고
    • Mutual functional destruction of HIV-1 Vpu and host TASK-1 channel
    • Hsu K, Seharaseyon J, Dong P, Bour S, Marbán E, (2004) Mutual functional destruction of HIV-1 Vpu and host TASK-1 channel. Molecular Cell 14: 259-267.
    • (2004) Molecular Cell , vol.14 , pp. 259-267
    • Hsu, K.1    Seharaseyon, J.2    Dong, P.3    Bour, S.4    Marbán, E.5
  • 7
    • 0034008733 scopus 로고    scopus 로고
    • A potassium ion channel protein encoded by chlorella virus PBCV-1
    • Plugge B, Gazzarrini S, Nelson M, Cerana, R Van Etten JL, et al. (2000) A potassium ion channel protein encoded by chlorella virus PBCV-1. Science 287: 1641-1644.
    • (2000) Science , vol.287 , pp. 1641-1644
    • Plugge, B.1    Gazzarrini, S.2    Nelson, M.3    Cerana, R.4    van Etten, J.L.5
  • 8
    • 33847111613 scopus 로고    scopus 로고
    • In vitro synthesis, tetramerization and single channel characterization of virus-encoded potassium channel Kcv
    • Shim JW, Yang M, Gu LQ, (2007) In vitro synthesis, tetramerization and single channel characterization of virus-encoded potassium channel Kcv. FEBS Letters 581: 1027-1034.
    • (2007) FEBS Letters , vol.581 , pp. 1027-1034
    • Shim, J.W.1    Yang, M.2    Gu, L.Q.3
  • 12
    • 69449093205 scopus 로고    scopus 로고
    • Chlorella viruses prevent multiple infections by membrane depolarization of the host
    • Greiner T, Frohns F, Kang M, Van Etten JL, Käsmann A, (2009) Chlorella viruses prevent multiple infections by membrane depolarization of the host. J. Gen Virol. 90: 2033-2039.
    • (2009) J. Gen Virol , vol.90 , pp. 2033-2039
    • Greiner, T.1    Frohns, F.2    Kang, M.3    Van Etten, J.L.4    Käsmann, A.5
  • 13
    • 33144456934 scopus 로고    scopus 로고
    • Potassium ion channels of Chlorella viruses cause rapid depolarization of host cell during infection
    • Frohns F, Käsmann A, Kramer D, Schäfer B, Mehmel M, et al. (2006) Potassium ion channels of Chlorella viruses cause rapid depolarization of host cell during infection. J Virol 80: 2437-2444.
    • (2006) J Virol , vol.80 , pp. 2437-2444
    • Frohns, F.1    Käsmann, A.2    Kramer, D.3    Schäfer, B.4    Mehmel, M.5
  • 14
    • 39649096556 scopus 로고    scopus 로고
    • Chlorella viruses evoke a rapid release of K+ from host cells during the early phase of infection
    • Neupärtl M, Meyer C, Woll I, Frohns F, Kang M, et al. (2008) Chlorella viruses evoke a rapid release of K+ from host cells during the early phase of infection. Virology 372: 340-348.
    • (2008) Virology , vol.372 , pp. 340-348
    • Neupärtl, M.1    Meyer, C.2    Woll, I.3    Frohns, F.4    Kang, M.5
  • 15
    • 77957960831 scopus 로고    scopus 로고
    • Initial events associated with virus PBCV-1 infection of Chlorella NC64A
    • Springer-Verlag, Berlin, (U. Luttge, W. Beyschlag, B. Budel, eds.)
    • Thiel G, Moroni A, Dunigan D, Van Etten JL, (2010) Initial events associated with virus PBCV-1 infection of Chlorella NC64A. Progress in Botany. (U. Luttge, W. Beyschlag, B. Budel, eds.) vol. 71. Springer-Verlag, Berlin, 169-183.
    • (2010) Progress in Botany , vol.71 , pp. 169-183
    • Thiel, G.1    Moroni, A.2    Dunigan, D.3    Van Etten, J.L.4
  • 16
    • 0035881839 scopus 로고    scopus 로고
    • The complete DNA sequence of the Ectocarpus siliculosus virus EsV-1 genome
    • Delaroque N, Müller DG, Bothe G, Pohl T, Knippers R, et al. (2001) The complete DNA sequence of the Ectocarpus siliculosus virus EsV-1 genome. Virology 15: 112-132.
    • (2001) Virology , vol.15 , pp. 112-132
    • Delaroque, N.1    Müller, D.G.2    Bothe, G.3    Pohl, T.4    Knippers, R.5
  • 18
    • 66549106970 scopus 로고    scopus 로고
    • Eighty-two amino acids are sufficient for making a potassium selective channel
    • Gazzarrini S, Kang M, Abenavoli A, Romani J, Olivari C, et al. (2009) Eighty-two amino acids are sufficient for making a potassium selective channel. Biochemical J. 420: 295-303.
    • (2009) Biochemical J , vol.420 , pp. 295-303
    • Gazzarrini, S.1    Kang, M.2    Abenavoli, A.3    Romani, J.4    Olivari, C.5
  • 20
    • 34247554844 scopus 로고    scopus 로고
    • Sequence and annotation of the 288-kb ATCV-1 virus that infects an endosymbiontic chlorella strain of the heliozoon Acanthocystis turfacea
    • Fitzgerald LA, Graves MV, Li X, Hartigan J, Pfitzner AJ, Hoffart E, et al. (2007) Sequence and annotation of the 288-kb ATCV-1 virus that infects an endosymbiontic chlorella strain of the heliozoon Acanthocystis turfacea. Virology 362: 350-361.
    • (2007) Virology , vol.362 , pp. 350-361
    • Fitzgerald, L.A.1    Graves, M.V.2    Li, X.3    Hartigan, J.4    Pfitzner, A.J.5    Hoffart, E.6
  • 21
    • 33846391192 scopus 로고    scopus 로고
    • Sequence and annotation of the 314-kb MT325 and the 321-kb FR483 viruses that infect Chlorella Pbi
    • Fitzgerald LA, Graves MV, Li X, Feldblyum T, Hartigan J, et al. (2007) Sequence and annotation of the 314-kb MT325 and the 321-kb FR483 viruses that infect Chlorella Pbi. Virology 358: 459-471.
    • (2007) Virology , vol.358 , pp. 459-471
    • Fitzgerald, L.A.1    Graves, M.V.2    Li, X.3    Feldblyum, T.4    Hartigan, J.5
  • 22
    • 33846362288 scopus 로고    scopus 로고
    • Sequence and annotation of the 369-kb NY-2A and 345-kb AR158 viruses that infect Chlorella NC64A
    • Fitzgerald LA, Graves MV, Li X, Feldblyum T, Nierman T, et al. (2007) Sequence and annotation of the 369-kb NY-2A and 345-kb AR158 viruses that infect Chlorella NC64A. Virology 358: 472-484.
    • (2007) Virology , vol.358 , pp. 472-484
    • Fitzgerald, L.A.1    Graves, M.V.2    Li, X.3    Feldblyum, T.4    Nierman, T.5
  • 24
    • 0033051833 scopus 로고    scopus 로고
    • Persistent virus integration into the genome of its algal host, Ectocarpus siliculosus (Phaeophyceae)
    • Delaroque N, Maier I, Knippers R, Müller DG, (1999) Persistent virus integration into the genome of its algal host, Ectocarpus siliculosus (Phaeophyceae). J Gen Virol 80: 1367-1370.
    • (1999) J Gen Virol , vol.80 , pp. 1367-1370
    • Delaroque, N.1    Maier, I.2    Knippers, R.3    Müller, D.G.4
  • 25
    • 84855586679 scopus 로고    scopus 로고
    • Chloroviruses: not your everyday plant virus
    • Van Etten JL, Dunigan DD, (2102) Chloroviruses: not your everyday plant virus. Trends Pl Sci 17: 1-8.
    • (2102) Trends Pl Sci , vol.17 , pp. 1-8
    • Van Etten, J.L.1    Dunigan, D.D.2
  • 26
    • 77953001382 scopus 로고    scopus 로고
    • The Ectocarpus genome and the independent evolution of multicellularity in brown algae
    • Cock JM, Sterck L, Rouzé P, Scornet D, Allen AE, et al. (2010) The Ectocarpus genome and the independent evolution of multicellularity in brown algae. Nature 465: 617-621.
    • (2010) Nature , vol.465 , pp. 617-621
    • Cock, J.M.1    Sterck, L.2    Rouzé, P.3    Scornet, D.4    Allen, A.E.5
  • 29
    • 50449087347 scopus 로고    scopus 로고
    • Transmembrane domain length of viral K+ channels is a signal for mitochondria targeting
    • Balss J, Mehmel M, Baumeister D, Hertel B, Delaroque N, (2008) Transmembrane domain length of viral K+ channels is a signal for mitochondria targeting. Proc Natl Acad Sci USA 105: 12313-12318.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 12313-12318
    • Balss, J.1    Mehmel, M.2    Baumeister, D.3    Hertel, B.4    Delaroque, N.5
  • 30
    • 63249112982 scopus 로고    scopus 로고
    • Ten reasons to exclude viruses from the tree of life
    • Moreira D, Lopez-Garcia P, (2009) Ten reasons to exclude viruses from the tree of life. Nat. Rev. Microbiol. 7: 306-311.
    • (2009) Nat. Rev. Microbiol , vol.7 , pp. 306-311
    • Moreira, D.1    Lopez-Garcia, P.2
  • 31
    • 80052599006 scopus 로고    scopus 로고
    • Mimivirus reveals Mre11/Rad50 fusion proteins with a sporadic distribution in eukaryotes, bacteria, viruses and plasmids
    • Yoshida T, Claverie JM, Ogta H, (2011) Mimivirus reveals Mre11/Rad50 fusion proteins with a sporadic distribution in eukaryotes, bacteria, viruses and plasmids. Virol J 8: 427.
    • (2011) Virol J , vol.8 , pp. 427
    • Yoshida, T.1    Claverie, J.M.2    Ogta, H.3
  • 32
    • 79959607309 scopus 로고    scopus 로고
    • Two new subfamilies of DNA mismatch repair proteins (MutS) specifically abundant in the marine environment
    • Ogata H, Ray J, Toyoda K, Sandaa RA, Nagasaki K, et al. (2011) Two new subfamilies of DNA mismatch repair proteins (MutS) specifically abundant in the marine environment. ISME J 5: 1143-1151.
    • (2011) ISME J , vol.5 , pp. 1143-1151
    • Ogata, H.1    Ray, J.2    Toyoda, K.3    Sandaa, R.A.4    Nagasaki, K.5
  • 33
    • 84884772237 scopus 로고    scopus 로고
    • The widespread evolutionary significance of viruses
    • (eds: E. Domingo, C.R. Parrish and J.J. Holland), New York: Academic Press
    • Villarreal LP, (2008) The widespread evolutionary significance of viruses. In Origin and Evolution of Viruses (eds: E. Domingo, C.R. Parrish and J.J. Holland), pp 477-515. New York: Academic Press.
    • (2008) In Origin and Evolution of Viruses , pp. 477-515
    • Villarreal, L.P.1
  • 34
    • 78049477633 scopus 로고    scopus 로고
    • The Chlorella variabilis NC64A genome reveals adaptation to photosynthesis, coevolution with viruses, and cryptic sex
    • Blanc G, Duncan G, Agarkova I, Borodovsky M, Gurnon J, et al. (2010) The Chlorella variabilis NC64A genome reveals adaptation to photosynthesis, coevolution with viruses, and cryptic sex. Plant Cell 22: 2943-2955.
    • (2010) Plant Cell , vol.22 , pp. 2943-2955
    • Blanc, G.1    Duncan, G.2    Agarkova, I.3    Borodovsky, M.4    Gurnon, J.5
  • 35
    • 3142655365 scopus 로고    scopus 로고
    • Long-distance interactions within the potassium channel pore are revealed by molecular diversity of viral proteins
    • Gazzarrini S, Kang M, Van Etten JL, Tayefeh S, Kast SM, (2004) Long-distance interactions within the potassium channel pore are revealed by molecular diversity of viral proteins. J Biol Chem 279: 28443-28449.
    • (2004) J Biol Chem , vol.279 , pp. 28443-28449
    • Gazzarrini, S.1    Kang, M.2    Van Etten, J.L.3    Tayefeh, S.4    Kast, S.M.5
  • 37
    • 0029871919 scopus 로고    scopus 로고
    • TWIK-1, a ubiquitous human weakly inward rectifying K+ channel with a novel structure
    • Lesage F, Guillemare E, Fink M, Duprat F, Lazdunski M, et al. (1996) TWIK-1, a ubiquitous human weakly inward rectifying K+ channel with a novel structure. EMBO Journal. 15: 1004-1011.
    • (1996) EMBO Journal , vol.15 , pp. 1004-1011
    • Lesage, F.1    Guillemare, E.2    Fink, M.3    Duprat, F.4    Lazdunski, M.5
  • 38
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5
  • 39
    • 83555163700 scopus 로고    scopus 로고
    • A functional HAK/KUP/KT-like potassium transporter encoded by chlorella viruses
    • Greiner T, Ramos J, Alvarez MC, Gurnon JR, et al. (2011) A functional HAK/KUP/KT-like potassium transporter encoded by chlorella viruses. Plant J 68: 977-986.
    • (2011) Plant J , vol.68 , pp. 977-986
    • Greiner, T.1    Ramos, J.2    Alvarez, M.C.3    Gurnon, J.R.4
  • 40
    • 84862020572 scopus 로고    scopus 로고
    • Viral proteins function as ion channels
    • Wang K, Xie S, Sun B, (2010) Viral proteins function as ion channels. Biochim Biophys Acta 29: 2059-2062.
    • (2010) Biochim Biophys Acta , vol.29 , pp. 2059-2062
    • Wang, K.1    Xie, S.2    Sun, B.3
  • 41
    • 39449104220 scopus 로고    scopus 로고
    • Identification and investigation of ORFans in the viral world
    • Yin Y, Fischer D, (2008) Identification and investigation of ORFans in the viral world. BMC Genomics. 9: 24.
    • (2008) BMC Genomics , vol.9 , pp. 24
    • Yin, Y.1    Fischer, D.2
  • 42
    • 17044437752 scopus 로고    scopus 로고
    • The complete genomes and proteomes of 27 Staphylococcus aureus bacteriophages
    • Kwan T, Liu J, DuBow M, Gros P, Pelletier J, (2005) The complete genomes and proteomes of 27 Staphylococcus aureus bacteriophages. Proc Natl Acad Sci USA 102: 5174-5179.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 5174-5179
    • Kwan, T.1    Liu, J.2    DuBow, M.3    Gros, P.4    Pelletier, J.5
  • 43
    • 34548419233 scopus 로고    scopus 로고
    • Unique genes in giant viruses: regular substitution pattern and anomalously short size
    • Ogata H, Claverie JM, (2007) Unique genes in giant viruses: regular substitution pattern and anomalously short size. Genome Res 17: 1353-1361.
    • (2007) Genome Res , vol.17 , pp. 1353-1361
    • Ogata, H.1    Claverie, J.M.2
  • 44
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ, (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 45
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Res
    • Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Res 32: 1792-97.
    • (2004) , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 46
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny Inference Package
    • Felsenstein J, (1989) PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 47
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogeneies by maximum likelihood
    • Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogeneies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 49
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F, (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 50
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP, (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.