-
1
-
-
0034625121
-
Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data
-
Battiste, J.L., and Wagner, G. (2000). Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data. Biochemistry 39, 5355-5365.
-
(2000)
Biochemistry
, vol.39
, pp. 5355-5365
-
-
Battiste, J.L.1
Wagner, G.2
-
2
-
-
79961168437
-
Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching
-
Berardi, M.J., Shih, W.M., Harrison, S.C., and Chou, J.J. (2011). Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching. Nature 476, 109-113.
-
(2011)
Nature
, vol.476
, pp. 109-113
-
-
Berardi, M.J.1
Shih, W.M.2
Harrison, S.C.3
Chou, J.J.4
-
3
-
-
79953903009
-
Optimal mutation sites for PRE data collection and membrane protein structure prediction
-
Chen, H.L., Ji, F., Olman, V., Mobley, C.K., Liu, Y.Z., Zhou, Y.P., Bushweller, J.H., Prestegard, J.H., and Xu, Y. (2011). Optimal mutation sites for PRE data collection and membrane protein structure prediction. Structure 19, 484-495.
-
(2011)
Structure
, vol.19
, pp. 484-495
-
-
Chen, H.L.1
Ji, F.2
Olman, V.3
Mobley, C.K.4
Liu, Y.Z.5
Zhou, Y.P.6
Bushweller, J.H.7
Prestegard, J.H.8
Xu, Y.9
-
4
-
-
0034875587
-
Evaluation of site-directed spin labeling for characterizing protein-ligand complexes using simulated restraints
-
Constantine, K.L. (2001). Evaluation of site-directed spin labeling for characterizing protein-ligand complexes using simulated restraints. Biophys. J. 81, 1275-1284.
-
(2001)
Biophys. J.
, vol.81
, pp. 1275-1284
-
-
Constantine, K.L.1
-
5
-
-
80053645537
-
A rigid disulfide-linked nitroxide side chain simplifies the quantitative analysis of PRE data
-
Fawzi, N.L., Fleissner, M.R., Anthis, N.J., Kálai, T., Hideg, K., Hubbell, W.L., and Clore, G.M. (2011). A rigid disulfide-linked nitroxide side chain simplifies the quantitative analysis of PRE data. J. Biomol. NMR 51, 105-114.
-
(2011)
J. Biomol. NMR
, vol.51
, pp. 105-114
-
-
Fawzi, N.L.1
Fleissner, M.R.2
Anthis, N.J.3
Kálai, T.4
Hideg, K.5
Hubbell, W.L.6
Clore, G.M.7
-
6
-
-
1242272066
-
NMR structure of the integral membrane protein OmpX
-
Fernández, C., Hilty, C., Wider, G., Güntert, P., and Wüthrich, K. (2004). NMR structure of the integral membrane protein OmpX. J. Mol. Biol. 336, 1211-1221.
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 1211-1221
-
-
Fernández, C.1
Hilty, C.2
Wider, G.3
Güntert, P.4
Wüthrich, K.5
-
7
-
-
0034003935
-
Protein global fold determination using site-directed spin and isotope labeling
-
Gaponenko, V., Howarth, J.W., Columbus, L., Gasmi-Seabrook, G., Yuan, J., Hubbell, W.L., and Rosevear, P.R. (2000). Protein global fold determination using site-directed spin and isotope labeling. Protein Sci. 9, 302-309.
-
(2000)
Protein Sci.
, vol.9
, pp. 302-309
-
-
Gaponenko, V.1
Howarth, J.W.2
Columbus, L.3
Gasmi-Seabrook, G.4
Yuan, J.5
Hubbell, W.L.6
Rosevear, P.R.7
-
8
-
-
77953286311
-
Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy
-
Gautier, A., Mott, H.R., Bostock, M.J., Kirkpatrick, J.P., and Nietlispach, D. (2010). Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy. Nat. Struct. Mol. Biol. 17, 768-774.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 768-774
-
-
Gautier, A.1
Mott, H.R.2
Bostock, M.J.3
Kirkpatrick, J.P.4
Nietlispach, D.5
-
9
-
-
0031585992
-
Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures
-
Gillespie, J.R., and Shortle, D. (1997). Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures. J. Mol. Biol. 268, 170-184.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 170-184
-
-
Gillespie, J.R.1
Shortle, D.2
-
10
-
-
84863110091
-
Simultaneous singlestructure and bundle representation of protein NMR structures in torsion angle space
-
Gottstein, D., Kirchner, D.K., and Güntert, P. (2012). Simultaneous singlestructure and bundle representation of protein NMR structures in torsion angle space. J. Biomol. NMR 52, 351-364.
-
(2012)
J. Biomol. NMR
, vol.52
, pp. 351-364
-
-
Gottstein, D.1
Kirchner, D.K.2
Güntert, P.3
-
11
-
-
0031576336
-
Torsion angle dynamics for NMR structure calculation with the new program DYANA
-
Güntert, P., Mumenthaler, C., and Wüthrich, K. (1997). Torsion angle dynamics for NMR structure calculation with the new program DYANA. J. Mol. Biol. 273, 283-298.
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 283-298
-
-
Güntert, P.1
Mumenthaler, C.2
Wüthrich, K.3
-
12
-
-
50649121583
-
Solution structure of the integral human membrane protein VDAC-1 in detergent micelles
-
Hiller, S., Garces, R.G., Malia, T.J., Orekhov, V.Y., Colombini, M., and Wagner, G. (2008). Solution structure of the integral human membrane protein VDAC-1 in detergent micelles. Science 321, 1206-1210.
-
(2008)
Science
, vol.321
, pp. 1206-1210
-
-
Hiller, S.1
Garces, R.G.2
Malia, T.J.3
Orekhov, V.Y.4
Colombini, M.5
Wagner, G.6
-
13
-
-
2442433447
-
Ensemble approach for NMR structure refinement against (1)H paramagnetic relaxation enhancement data arising from a flexible paramagnetic group attached to a macromolecule
-
Iwahara, J., Schwieters, C.D., and Clore, G.M. (2004). Ensemble approach for NMR structure refinement against (1)H paramagnetic relaxation enhancement data arising from a flexible paramagnetic group attached to a macromolecule. J. Am. Chem. Soc. 126, 5879-5896.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 5879-5896
-
-
Iwahara, J.1
Schwieters, C.D.2
Clore, G.M.3
-
14
-
-
33846561471
-
Practical aspects of (1)H transverse paramagnetic relaxation enhancement measurements on macromolecules
-
Iwahara, J., Tang, C., and Marius Clore, G. (2007). Practical aspects of (1)H transverse paramagnetic relaxation enhancement measurements on macromolecules. J. Magn. Reson. 184, 185-195.
-
(2007)
J. Magn. Reson.
, vol.184
, pp. 185-195
-
-
Iwahara, J.1
Tang, C.2
Marius Clore, G.3
-
15
-
-
33644774471
-
Optimal isotope labelling for NMR protein structure determinations
-
Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Mei Ono, A., and Güntert, P. (2006). Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-57.
-
(2006)
Nature
, vol.440
, pp. 52-57
-
-
Kainosho, M.1
Torizawa, T.2
Iwashita, Y.3
Terauchi, T.4
Mei Ono, A.5
Güntert, P.6
-
16
-
-
48649098982
-
Structure of KCNE1 and implications for how it modulates the KCNQ1 potassium channel
-
Kang, C.B., Tian, C.L., Sönnichsen, F.D., Smith, J.A., Meiler, J., George, A.L., Jr., Vanoye, C.G., Kim, H.J., and Sanders, C.R. (2008). Structure of KCNE1 and implications for how it modulates the KCNQ1 potassium channel. Biochemistry 47, 7999-8006.
-
(2008)
Biochemistry
, vol.47
, pp. 7999-8006
-
-
Kang, C.B.1
Tian, C.L.2
Sönnichsen, F.D.3
Smith, J.A.4
Meiler, J.5
George Jr., A.L.6
Vanoye, C.G.7
Kim, H.J.8
Sanders, C.R.9
-
17
-
-
0034717007
-
Structure of the light-driven chloride pump halorhodopsin at 1.8 A resolution
-
Kolbe, M., Besir, H., Essen, L.O., and Oesterhelt, D. (2000). Structure of the light-driven chloride pump halorhodopsin at 1.8 A resolution. Science 288, 1390-1396.
-
(2000)
Science
, vol.288
, pp. 1390-1396
-
-
Kolbe, M.1
Besir, H.2
Essen, L.O.3
Oesterhelt, D.4
-
18
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
Koradi, R., Billeter, M., and Wüthrich, K. (1996). MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14, 51-55, 29-32.
-
(1996)
J. Mol. Graph.
, vol.14
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
-
19
-
-
0024853292
-
Spin labeling of proteins
-
Kosen, P.A. (1989). Spin labeling of proteins. Methods Enzymol. 177, 86-121.
-
(1989)
Methods Enzymol.
, vol.177
, pp. 86-121
-
-
Kosen, P.A.1
-
20
-
-
36048971123
-
Structure of outer membrane protein G by solution NMR spectroscopy
-
Liang, B.Y., and Tamm, L.K. (2007). Structure of outer membrane protein G by solution NMR spectroscopy. Proc. Natl. Acad. Sci. USA 104, 16140-16145.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 16140-16145
-
-
Liang, B.Y.1
Tamm, L.K.2
-
21
-
-
33645472931
-
Site-directed parallel spin-labeling and paramagnetic relaxation enhancement in structure determination of membrane proteins by solution NMR spectroscopy
-
Liang, B.Y., Bushweller, J.H., and Tamm, L.K. (2006). Site-directed parallel spin-labeling and paramagnetic relaxation enhancement in structure determination of membrane proteins by solution NMR spectroscopy. J. Am. Chem. Soc. 128, 4389-4397.
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 4389-4397
-
-
Liang, B.Y.1
Bushweller, J.H.2
Tamm, L.K.3
-
22
-
-
77954633619
-
Membrane domain structures of three classes of histidine kinase receptors by cell-free expression and rapid NMR analysis
-
Maslennikov, I., Klammt, C., Hwang, E., Kefala, G., Okamura, M., Esquivies, L., Mörs, K., Glaubitz, C., Kwiatkowski, W., Jeon, Y.H., and Choe, S. (2010). Membrane domain structures of three classes of histidine kinase receptors by cell-free expression and rapid NMR analysis. Proc. Natl. Acad. Sci. USA 107, 10902-10907.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 10902-10907
-
-
Maslennikov, I.1
Klammt, C.2
Hwang, E.3
Kefala, G.4
Okamura, M.5
Esquivies, L.6
Mörs, K.7
Glaubitz, C.8
Kwiatkowski, W.9
Jeon, Y.H.10
Choe, S.11
-
23
-
-
58149475508
-
Backbone structure of a small helical integral membrane protein: A unique structural characterization
-
Page, R.C., Lee, S., Moore, J.D., Opella, S.J., and Cross, T.A. (2009). Backbone structure of a small helical integral membrane protein: a unique structural characterization. Protein Sci. 18, 134-146.
-
(2009)
Protein Sci.
, vol.18
, pp. 134-146
-
-
Page, R.C.1
Lee, S.2
Moore, J.D.3
Opella, S.J.4
Cross, T.A.5
-
24
-
-
4444221565
-
UCSF Chimera - A visualization system for exploratory research and analysis
-
Pettersen, E.F., Goddard, T.D., Huang, C.C., Couch, G.S., Greenblatt, D.M., Meng, E.C., and Ferrin, T.E. (2004). UCSF Chimera - a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612.
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
25
-
-
46149100051
-
Transmembrane segment enhanced labeling as a tool for the backbone assignment of a-helical membrane proteins
-
Reckel, S., Sobhanifar, S., Schneider, B., Junge, F., Schwarz, D., Durst, F., Löhr, F., Güntert, P., Bernhard, F., and Dötsch, V. (2008). Transmembrane segment enhanced labeling as a tool for the backbone assignment of a-helical membrane proteins. Proc. Natl. Acad. Sci. USA 105, 8262-8267.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 8262-8267
-
-
Reckel, S.1
Sobhanifar, S.2
Schneider, B.3
Junge, F.4
Schwarz, D.5
Durst, F.6
Löhr, F.7
Güntert, P.8
Bernhard, F.9
Dötsch, V.10
-
26
-
-
83455242841
-
Solution NMR structure of proteorhodopsin
-
Reckel, S., Gottstein, D., Stehle, J., Löhr, F., Verhoefen, M.K., Takeda, M., Silvers, R., Kainosho, M., Glaubitz, C., Wachtveitl, J., et al. (2011). Solution NMR structure of proteorhodopsin. Angew. Chem. Int. Ed. 50, 11942-11946.
-
(2011)
Angew. Chem. Int. Ed.
, vol.50
, pp. 11942-11946
-
-
Reckel, S.1
Gottstein, D.2
Stehle, J.3
Löhr, F.4
Verhoefen, M.K.5
Takeda, M.6
Silvers, R.7
Kainosho, M.8
Glaubitz, C.9
Wachtveitl, J.10
-
27
-
-
57749192468
-
Solution state NMR structure and dynamics of KpOmpA, a 210 residue transmembrane domain possessing a high potential for immunological applications
-
Renault, M., Saurel, O., Czaplicki, J., Demange, P., Gervais, V., Löhr, F., Réat, V., Piotto, M., and Milon, A. (2009). Solution state NMR structure and dynamics of KpOmpA, a 210 residue transmembrane domain possessing a high potential for immunological applications. J. Mol. Biol. 385, 117-130.
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 117-130
-
-
Renault, M.1
Saurel, O.2
Czaplicki, J.3
Demange, P.4
Gervais, V.5
Löhr, F.6
Réat, V.7
Piotto, M.8
Milon, A.9
-
28
-
-
14544292475
-
NMR structure of Mistic, a membrane-integrating protein for membrane protein expression
-
Roosild, T.P., Greenwald, J., Vega, M., Castronovo, S., Riek, R., and Choe, S. (2005). NMR structure of Mistic, a membrane-integrating protein for membrane protein expression. Science 307, 1317-1321.
-
(2005)
Science
, vol.307
, pp. 1317-1321
-
-
Roosild, T.P.1
Greenwald, J.2
Vega, M.3
Castronovo, S.4
Riek, R.5
Choe, S.6
-
29
-
-
68349093958
-
TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
-
Shen, Y., Delaglio, F., Cornilescu, G., and Bax, A. (2009). TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts. J. Biomol. NMR 44, 213-223.
-
(2009)
J. Biomol. NMR
, vol.44
, pp. 213-223
-
-
Shen, Y.1
Delaglio, F.2
Cornilescu, G.3
Bax, A.4
-
30
-
-
77953113485
-
Structural investigation of the C-terminal catalytic fragment of presenilin 1
-
Sobhanifar, S., Schneider, B., Löhr, F., Gottstein, D., Ikeya, T., Mlynarczyk, K., Pulawski, W., Ghoshdastider, U., Kolinski, M., Filipek, S., et al. (2010). Structural investigation of the C-terminal catalytic fragment of presenilin 1. Proc. Natl. Acad. Sci. USA 107, 9644-9649.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 9644-9649
-
-
Sobhanifar, S.1
Schneider, B.2
Löhr, F.3
Gottstein, D.4
Ikeya, T.5
Mlynarczyk, K.6
Pulawski, W.7
Ghoshdastider, U.8
Kolinski, M.9
Filipek, S.10
-
31
-
-
0000825481
-
A statistical method for evaluating systematic relationships
-
Sokal, R.R., and Michener, C.D. (1958). A statistical method for evaluating systematic relationships. University of Kansas Science Bulletin 38, 1409-1438.
-
(1958)
University of Kansas Science Bulletin
, vol.38
, pp. 1409-1438
-
-
Sokal, R.R.1
Michener, C.D.2
-
32
-
-
34250176566
-
Structure of the Na,K-ATPase regulatory protein FXYD1 in micelles
-
Teriete, P., Franzin, C.M., Choi, J., and Marassi, F.M. (2007). Structure of the Na,K-ATPase regulatory protein FXYD1 in micelles. Biochemistry 46, 6774-6783.
-
(2007)
Biochemistry
, vol.46
, pp. 6774-6783
-
-
Teriete, P.1
Franzin, C.M.2
Choi, J.3
Marassi, F.M.4
-
33
-
-
25844528201
-
Efficient strategy for the rapid backbone assignment of membrane proteins
-
Trbovic, N., Klammt, C., Koglin, A., Löhr, F., Bernhard, F., and Dötsch, V. (2005). Efficient strategy for the rapid backbone assignment of membrane proteins. J. Am. Chem. Soc. 127, 13504-13505.
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 13504-13505
-
-
Trbovic, N.1
Klammt, C.2
Koglin, A.3
Löhr, F.4
Bernhard, F.5
Dötsch, V.6
-
34
-
-
34547687784
-
Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy
-
Tugarinov, V., Kanelis, V., and Kay, L.E. (2006). Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy. Nat. Protoc. 1, 749-754.
-
(2006)
Nat. Protoc.
, vol.1
, pp. 749-754
-
-
Tugarinov, V.1
Kanelis, V.2
Kay, L.E.3
-
35
-
-
67649908268
-
Solution nuclear magnetic resonance structure of membrane-integral diacylglycerol kinase
-
Van Horn, W.D., Kim, H.J., Ellis, C.D., Hadziselimovic, A., Sulistijo, E.S., Karra, M.D., Tian, C.L., Sönnichsen, F.D., and Sanders, C.R. (2009). Solution nuclear magnetic resonance structure of membrane-integral diacylglycerol kinase. Science 324, 1726-1729.
-
(2009)
Science
, vol.324
, pp. 1726-1729
-
-
Van Horn, W.D.1
Kim, H.J.2
Ellis, C.D.3
Hadziselimovic, A.4
Sulistijo, E.S.5
Karra, M.D.6
Tian, C.L.7
Sönnichsen, F.D.8
Sanders, C.R.9
-
36
-
-
33750886311
-
Crystal structure of a rhomboid family intramembrane protease
-
Wang, Y.C., Zhang, Y.J., and Ha, Y. (2006). Crystal structure of a rhomboid family intramembrane protease. Nature 444, 179-180.
-
(2006)
Nature
, vol.444
, pp. 179-180
-
-
Wang, Y.C.1
Zhang, Y.J.2
Ha, Y.3
-
37
-
-
52049098074
-
NMR solution structure of the integral membrane enzyme DsbB: Functional insights into DsbB-catalyzed disulfide bond formation
-
Zhou, Y.P., Cierpicki, T., Jimenez, R.H.F., Lukasik, S.M., Ellena, J.F., Cafiso, D.S., Kadokura, H., Beckwith, J., and Bushweller, J.H. (2008). NMR solution structure of the integral membrane enzyme DsbB: functional insights into DsbB-catalyzed disulfide bond formation. Mol. Cell 31, 896-908.
-
(2008)
Mol. Cell
, vol.31
, pp. 896-908
-
-
Zhou, Y.P.1
Cierpicki, T.2
Jimenez, R.H.F.3
Lukasik, S.M.4
Ellena, J.F.5
Cafiso, D.S.6
Kadokura, H.7
Beckwith, J.8
Bushweller, J.H.9
|