Textural transition in an aragonite travertine formed under various flow conditions at Pancuran Pitu, Central Java, Indonesia

Sedimentary Geology

Volumn 265-266, Issue , 2012, Pages 195-209

  Okumura, Tomoyo ^a   Takashima, Chizuru ^b   Shiraishi, Fumito ^c   Akmaluddin, ^a   Kano, Akihiro ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b SAGA UNIVERSITY   (Japan)

^c GADJAH MADA UNIVERSITY   (Indonesia)

Author keywords

Aragonite; Cyanobacteria; Daily lamination; Precambrian stromatolite; Travertine

Indexed keywords

ARAGONITE; CYANOBACTERIA; DAILY LAMINATION; PRECAMBRIAN; TRAVERTINE;

AGGLOMERATION; AGGREGATES; CARBONATE MINERALS; CRYSTALLINE MATERIALS; FLOW RATE; LAMINATING; MICROORGANISMS;

LIMESTONE;

ARAGONITE; BIOFILM; CYANOBACTERIUM; DEPOSITION VELOCITY; GEOMICROBIOLOGY; HYDRODYNAMICS; LAMINATION; MICROBIAL ACTIVITY; MICROBIAL MAT; PRECAMBRIAN; PRECIPITATION (CHEMISTRY); STROMATOLITE; TEXTURE; TRAVERTINE; WATER CHEMISTRY;

CENTRAL JAVA; INDONESIA;

CYANOBACTERIA;

EID: 84861801396     PISSN: 00370738     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.sedgeo.2012.04.010     Document Type: Article

References (73)

1. Altermann W. Accretion, trapping and binding of sediment in Archean stromatolites-morphological expression of the antiquity of life. Space Science Reviews 2008, 135:55-79.
2. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 1997, 25:3389-3402.
3. Andres M.S., Sumner D.Y., Reid R.P., Swart P.K. Isotopic fingerprints of microbial respiration in aragonite from Bahamian stromatolites. Geology 2006, 34:973-976.
4. Arp G., Thiel V., Reimer A., Michaelis W., Reitner J. Biofilm exopolymers control microbialite formation at thermal springs discharging into the alkaline Pyramid Lake, Nevada, USA. Sedimentary Geology 1999, 126:159-176.
5. Arp G., Reimer A., Reitner J. Calcification in cyanobacterial biofilms of alkaline salt lakes. Europian Journal of Phycology 1999, 34:393-403.
6. Browne K.M., Golubic S., Seong-Joo L. Shallow marine microbial carbonate deposits. Microbial Sediments 2000, 233-249. Springer-Verlag, Berlin. R.E. Riding, S.M. Awramik (Eds.).
7. Buczynski C., Chafetz H.S. Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy. Journal of Sedimentary Petrology 1991, 61:226-233.
8. Buick R., Dunlop J.S.R., Groves D.I. Stromatolite recognition in ancient rocks: an appraisal of irregularly laminated structures in an Early Archean chart-barite unit from North Pole, Western Australia. Alcheringa 1981, 5:161-181.
9. Burne R.V., Moore L.S. Microbialite: orgenosedimentary deposits of benthic microbial communities. Palaios 1987, 2:241-245.
10. Cao R. Origin and order of cyclic growth patterns in matministromatolite bioherms from the Proterozoic Wumishan formation, North China. Precambrian Research 1991, 52:167-178.
11. Chafetz H.S., Folk R.L. Travertines: depositional morphology and the bacterially constructed constituents. Journal of Sedimentary Research 1984, 54:289-316.
12. Dreybrodt W., Buhmann D. Amass transfer model for dissolution and precipitation of calcite from solutions in turbulent motion. Chemical Geology 1991, 90:107-122.
13. Dupraz C., Reid P.R., Braissant O., Decho A.W., Norman R.S., Visscher P.T. Processes of carbonate precipitation in modern microbial mats. Earth-Science Reviews 2009, 96:141-162.
14. Fernandez-Diaz L., Putnis A., Prieto M., Purnis C.V. The role of magnesium in the crystallization of calcite and aragonite in a porous medium. Journal of Sedimentary Research 1996, 66:482-491.
15. Folk R.L. The natural history of crystalline calcium carbonate: effect of magnesium content and salinity. Journal of Sedimentary Research 1974, 44:40-53.
16. Folk R.L. Interaction between bacteria, nannobacteria and mineral precipitation in hot springs of central Italy. Geographie Physique et Quaternaire 1994, 48:233-246.
17. Folk R.L., Chafetz H.S., Tiezzi P.A. Bizarre forms of depositional and diagenetic calcite in hot-spring travertines, central Italy. SEPM (Society for Sedimentary Geology) Special Publication 1985, 36:349-369. N. Scheiderman, P.M. Harris (Eds.).
18. Ford T.D., Pedley M. A review of the tufas and travertine deposits of the world. Earth Science Reviews 1996, 41:117-175.
19. Fouke B.W., Farmer J.D., Des Marais D.J., Pratt L., Sturchio N.C., Burns P.C., Discipulo M.K. Depositional facies and aqueous-solid geochemistry of travertine-depositing hot springs (Angel Terrace, Mammoth hot springs, Yellowstone national park, USA. Journal of Sedimentary Research 2000, 70:565-585.
20. Freytet P., Plet A. Modern freshwater microbial carbonates: the Phormidium stromatolites (Tufa-travertine) of southeastern Burgundy (Paris Basin, France). Facies 1996, 34:219-238.
21. Freytet P., Verrecchia E.P. Freshwater organisms that build stromatolites: a synopsis of biocrystallization by prokaryotic and eukaryotic algae. Sedimentology 1998, 45:535-563.
22. Gebelein C.D. Distribution, morphology, and accretion rate of recent subtidal algal stromatolites, Bermuda. Journal of Sedimentary Petrology 1969, 39:49-69.
23. Grotzinger J.P., Knoll A.H. Stromatolites in Precambrian carbonates: evolutionary mileposts or environmental depstics?. Annual Review of Earth and Planetary Sciences 1999, 27:313-358.
24. Grotzinger J.P., Reed J.F. Evidence for primary aragonite precipitation, lower Proterozoic (1.9Ga) Rocknest dolomite, Wopmay orogen, northwest Canada. Geology 1983, 11:710-713.
25. Grotzinger J.P., Rothman D.H. An abiotic model for stromatolite morphogenesis. Nature 1996, 383:423-425.
26. Guo L., Riding R. Aragonite laminae in hot water travertine crust, Rapolano, Italy. Sedimentology 1992, 39:1067-1079.
27. Harding T., Jungblut A.D., Lovejoy C., Vincent W.F. Microbes in high arctic snow and implications for the cold biosphere. Applied and Environmental Microbiology 2011, 77:3234-3243.
28. Hofmann H.J. Archean stromatolites as microbial activity. Microbial Sediments 2000, 315-327. Springer, Berlin. R. Riding, S. Awramik (Eds.).
29. Hofmann H.J., Jackson G.D. Proterozoic ministromatolites with radial-fibrous fabric. Sedimentology 1987, 34:963-971.
30. Hurek T., Reinhold-Hurek B. Identification of grass-associated and toluene-degrading diazotrophs, Azoarcus spp., by analyses of partial 16S ribosomal DNA sequences. Applied and Environmental Microbiology 1995, 61:2257-2261.
31. Iino T., Mori K., Uchino Y., Nakagawa T., Harayama S., Suzuki K. Ignavibacterium album gen. nov., sp. nov., a moderately thermophilic anaerobic bacterium isolated from microbial mats at a terrestrial hot spring and proposal of Ignavibacteria classis nov., for a novel lineage at the periphery of green sulfur bacteria. International Journal of Systematic and Evolutionary Microbiology 2010, 60:1376-1382.
32. Ikeda S., Okubo T., Takeda N., Banba M., Sasaki K., Imaizumi-Anraku H., Fujihara S., Ohwaki Y., Ohshima K., Fukuta Y., Eda S., Mithui H., Hattori M., Sato T., Shinano T., Minamisawa K. The genotype of the Calcium-Calmodulin-dependent protein kinase gene (CCaMK) determines bacterial community diversity in rice roots under paddy and upland field conditions. Applied and Environmental Microbiology 2011, 77:4399-4405.
33. Jones B., Kahle C.F. Morphology, relationship and origin of fiber and dendrite calcite crystals. Journal of Sedimentary Petrology 1993, 63:1018-1031.
34. Jones B., Peng X. Intrinsic versus extrinsic controls on the development of calcite dendrite bushes, Shuzhishi Spring, Rehai geothermal area, Tengchong, Yunnan Province, China. Sedimentary Geology 2012, 249-250:45-62.
35. Jones B., Renaut R.W. Noncrystallographic calcite dendrites from hot-spring deposits at Lake Bogoria, Kenya. Journal of Sedimentary Research 1995, A65:154-169.
36. Jones B., Renaut R.W. Morphology and growth of aragonite crystals in hot-spring travertines at Lake Bogoria, Kenya Rift Valley. Sedimentology 1996, 43:323-340.
37. Jones B., Renaut R.W. Cyclic development of large, complex, calcite dendrite crystals in the Clinton travertine, Interior British Columbia, Canada. Sedimentary Geology 2008, 203:17-35.
38. Jones B., Renaut R.W. Calcareous spring deposits in continental settings. Developments in Sedimentology 2010, 61:177-224.
39. Jones B., Renaut R.W., Owen B.R., Torfason H. Growth patterns and implications of complex dendrites in calcite travertines from L suhóll, Snæfellsnes, Iceland. Sedimentology 2005, 52:1277-1301.
40. Kah L.C., Knoll A.H. Microbenthic distribution of Proterozoic tidal frats: environmental and taphonomic consideration. Geology 1996, 24:79-82.
41. Kano A., Matsuoka J., Kojo T., Fujii H. Origin of annual laminations in tufa deposits, southwest Japan. Palaeogeography, Palaeoclimatology, Palaeoecology 2003, 191:243-262.
42. Kano A., Takashima C., Ohtsuka S. Hot-springs in eastern Kyushu and their related sedimentation and microbial processes. Field ExcursionGuidebook FE-A10 2006, The Sedimentological Society of Japan, 10pp. M. Ito, K. Yagishita, H. Matsuda (Eds.).
43. 3 polymorphism. Journal of Crystal Growth 2002, 240:230-235.
44. Kawai T., Kano A., Hori M. Geochemical and hydrological controls on biannual lamination of tufa deposits. Sedimentary Geology 2009, 213:41-50.
45. Kitano Y. Geochemistry of calcareous deposits found in hot springs. Journal of Earth Science Nagoya University 1963, 1:68-100.
46. Liu Z.H., Svensson U., Dreybrodt W., Yuan D.X., Buhmann D. Hydrodynamic control of inorganic calcite precipitation in Huanglong Ravine, China: field measurements and theoretical prediction of deposition rates. Geochimica et Cosmochimica Acta 1995, 59:3078-3097.
47. Liu Z., Li Q., Sun H., Liao C., Li H., Wang J., Wu K. Diurnal variations of hydrochemistry in a travertine-depositing stream at Baishuitai, Yunnnan, SW China. Aquatic Geochemistry 2006, 12:103-121.
48. Logan B.W., Hoffman P., Gebelein C.D. Algal mats, cryptalgal fabrics and structures, Hamelin Pool, Western Australia. American Association of Petroleum Geologists, Memoir 1974, 22:140-194.
49. Lowe D.R. Abiological origin of described stromatolites older than 3.2Ga. Geology 1994, 22:387-390.
50. Monty C.V.T. The origin and development of cryptalgal fabrics. Developments in Sedimentology 1976, 20:193-2749. Elsevire Scientific Publication Company, Amsterdam, The Netherlands. M.R. Walter (Ed.).
51. Murray A.E., Hollibaugh J.T., Orrego C. Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments. Applied and Environmental Microbiology 1996, 62:2676-2680.
52. Muyzer G., Waal E.D., Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction amplified genes coding for 16S rRNA. Applied and Environmental Microbiology 1993, 59:695-700.
53. Okumura T., Takashima C., Shiraishi F., Nishida S., Yukimura K., Naganuma T., Koike H., Arp G., Kano A. Microbial processes forming daily lamination in an aragonite travertine, Nagano-yu Hot Spring, Southwest Japan. Geomicrobiology Journal 2011, 28:135-148.
54. Pedley M. Freshwater (phytoherm) reefs: the role of biofilms and their bearing on marine reef cementation. Sedimentary Geology 1992, 79:255-274.
55. Pedley H.M., Rogerson M. In vitro investigations of the impact of different temperature and flow velocity conditions on tufa microfabric. Geological Society, London, Special Publication 2010, 336:193-210.
56. Pentecost A. Formation of laminate travertines at Bagno vignone, Italy. Geomicrobiology Journal 1994, 14:239-251.
57. Pentecost A. The quaternary travertine deposits of Europe and Asia minor. Quartenary Science Reviews 1995, 14:1005-1028.
58. 2O. Geochimica et Cosmochimica Acta 1982, 46:1011-1040.
59. Reid R.P., Visscher P.T., Decho A.W., Stolz J.F., Bebout B.M., Dupraz C., Macintyre I.G., Paerl H.W., Pinckney J.L., Prufert-Bebout L., Steppe T.F., Des Marais D.J. The role of microbes in accretion, lamination and early lithification of modern marine stromatolites. Nature 2000, 406:989-992.
60. Renaut R.W., Jones B. Controls on aragonite and calcite precipitation in hot spring travertines at Chemurkeu, Lake Bongoria, Kenya. Canadian Journal of Earth Sciences 1997, 34:801-818.
61. Riding R. Microbial carbonates: the geological record of calcified bacterial-algal mats and biofilms. Sedimentology 2000, 47:179-214.
62. Riding R. Abiogenic, microbial and hybrid authigenic carbonate crusts: components of Precambrian stromatolites. Geologia Croatica 2008, 61:73-103.
63. Semikhatov M.A., Gebelein C.D., Cloud P., Awramik S.M., Benmore W.C. Stromatolite morphogenesis-progress and problems. Canadian Journal of Earth Sciences 1979, 16:992-1015.
64. Stal L.J. Cyanobacterial mats and stromatolites. The Ecology of Cyanobacteria 2002, 61-120. Kluwer Academic Publishers, The Netherland. B. Whitton, M. Potts (Eds.).
65. Takashima C., Kano A. Microbial processes forming daily lamination in a stromatolitic travertine. Sedimentary Geology 2008, 208:114-119.
66. Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution 2007, 24:1596-1599.
67. Vaccarino M.A., Johansen J.R. Scytonematopsis contorta sp. nov. (Nostocales), a new species from the Hawaiian Islands. Fotta 2011, 11:149-161.
68. Visscher P.T., Reid R.P., Debout B.M., Hoeft S., Macinryre I.G., Thompson J.A. Formation of lithified micritic laminae in modern marine stromatolites (Bahamas): the role of sulfur cycling. American Mineralogist 1998, 83:1482-1493.
69. Walter M.R., Bauld J., Brock T.D. Microbiology and morphologenesis of columner stromatolite (Conophyton, Vacerilla) from hot springs Yellowstone National Park. Developments in Sedimentology 1976, 20:273-310. Elsevier Scientific Publishing Company, Amsterdam. M.R. Walter (Ed.).
70. Weiss J.V., Rentz J.A., Neubauer S.C., Floyd M.M., Lilburn T.G., Emerson D. Characterization of neutrophic Fe (II)-oxidizing bacteria isolated from the rhizhosphere of wetland plants and description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov. Geomicrobiology Journal 2007, 24:559-570.
71. Wingender J., Neu T.R., Flemming H.C. Wat are bacterial extracellular polymeric substances?. Microbial Extracellular Polymeric Substances, Characterization, structure and function 1999, 1-15. Springer-Verlag, Berlin. J. Wingender, T.R. Neu, H.-C. Flemming (Eds.).
72. Xiao S., Knoll A.H., Kaufman A.J., Yiu L., Zhang Y. Neoproterozoic fossils in Mesoproterozoic rocks? Chemostratigraphic resolution of a biostratigraphic conundrum from the North China Platform. Precambrian Research 1997, 84:197-220.
73. Zimmermann J., Gonzalez J.M., Saiz-Jimenes C., Ludwig W. Detection and phylogenetic relationship of highly diverse uncultured acidobacterial communities in Altamira Cave using 23S rRNA sequence analyses. Geomicrobiology Journal 2005, 22:379-388.