The genotype of the calcium/calmodulin-dependent protein kinase gene (CCaMK) determines bacterial community diversity in rice roots under paddy and upland field conditions

Applied and Environmental Microbiology

Volumn 77, Issue 13, 2011, Pages 4399-4405

  Ikeda, Seishi ^a,b   Okubo, Takashi ^a   Takeda, Naoya ^c   Banba, Mari ^c   Sasaki, Kazuhiro ^a   Imaizumi Anraku, Haruko ^c   Fujihara, Shinsuke ^d   Ohwaki, Yoshinari ^d   Ohshima, Kenshiro ^e   Fukuta, Yoshimichi ^f   Eda, Shima ^a   Mitsui, Hisayuki ^a   Hattori, Masahira ^e   Sato, Tadashi ^a   Shinano, Takuro ^b   Minamisawa, Kiwamu ^a  

^a TOHOKU UNIVERSITY   (Japan)

^b NATIONAL AGRICULTURAL RESEARCH CENTER FOR HOKKAIDO REGION   (Japan)

^c NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

^d NATIONAL AGRICULTURAL RESEARCH CENTER   (Japan)

^e UNIVERSITY OF TOKYO   (Japan)

^f JAPAN INTERNATIONAL RESEARCH CENTER FOR AGRICULTURAL SCIENCES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ACTINOBACTERIA; BACTERIAL COMMUNITY; CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE; CLONE LIBRARY; FIELD CONDITIONS; FIRMICUTES; FLOWERING STAGE; GENE DOSAGE; ORYZA SATIVA; PRINCIPAL COORDINATE ANALYSIS; RELATIVE ABUNDANCE; RHIZOBIALES; RICE MUTANTS; RICE PLANTS; RICE ROOTS; SHOOT LENGTH; SIGNIFICANT IMPACTS; TILLER NUMBER;

BACTERIA; BACTERIOLOGY; CLONING; ENZYMES; GENES;

LANDFORMS;

BACTERIAL DNA; CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE KINASE; RIBOSOME DNA; RNA 16S;

ABUNDANCE; BACTERIUM; CALCIUM; ENDOPHYTE; ENZYME ACTIVITY; EPIPHYTE; FUNCTIONAL MORPHOLOGY; GENE EXPRESSION; GENOTYPE; INTERSPECIFIC INTERACTION; MICROBIAL COMMUNITY; MUTATION; PADDY FIELD; POPULATION STRUCTURE; PROTEIN; RELATIVE ABUNDANCE; RICE; ROOT; SPECIES DIVERSITY; UPLAND REGION;

ARTICLE; BACTERIUM; BIODIVERSITY; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; ENZYMOLOGY; GENETICS; GENOTYPE; HETEROZYGOTE; HOMOZYGOTE; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT ROOT; RICE;

BACTERIA; BIODIVERSITY; CALCIUM-CALMODULIN-DEPENDENT PROTEIN KINASE KINASE; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; GENOTYPE; HETEROZYGOTE; HOMOZYGOTE; MOLECULAR SEQUENCE DATA; ORYZA SATIVA; PHYLOGENY; PLANT ROOTS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

ACTINOBACTERIA; ALPHAPROTEOBACTERIA; ANAEROLINEAE; BACTERIA (MICROORGANISMS); CHLOROFLEXI; CHLOROFLEXI (CLASS); CLOSTRIDIA; FIRMICUTES; ORYZA SATIVA; RHIZOBIALES; SACCHAROTHRIX; SPHINGOMONADALES; UNCLASSIFIED ACTINOSYNNEMATACEAE;

EID: 79960082012     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00315-11     Document Type: Article

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