-
1
-
-
0347357617
-
Protein folding and misfolding
-
Dobson CM, (2003) Protein folding and misfolding. Nature 426: 884-890.
-
(2003)
Nature
, vol.426
, pp. 884-890
-
-
Dobson, C.M.1
-
2
-
-
47049117171
-
The same primary structure of the prion protein yields two distinct self-propagating states
-
Makarava N, Baskakov IV, (2008) The same primary structure of the prion protein yields two distinct self-propagating states. J Biol Chem 283: 15988-15996.
-
(2008)
J Biol Chem
, vol.283
, pp. 15988-15996
-
-
Makarava, N.1
Baskakov, I.V.2
-
3
-
-
0033849965
-
Studies on the in vitro assembly of a beta 1-40: implications for the search for a beta fibril formation inhibitors
-
Goldsbury CS, Wirtz S, Muller SA, Sunderji S, Wicki P, et al. (2000) Studies on the in vitro assembly of a beta 1-40: implications for the search for a beta fibril formation inhibitors. J Struct Biol 130: 217-231.
-
(2000)
J Struct Biol
, vol.130
, pp. 217-231
-
-
Goldsbury, C.S.1
Wirtz, S.2
Muller, S.A.3
Sunderji, S.4
Wicki, P.5
-
4
-
-
84863903065
-
Chemical and biological approaches for adapting proteostasis to ameliorate protein misfolding and aggregation diseases: progress and prognosis
-
Lindquist SL, Kelly JW, (2011) Chemical and biological approaches for adapting proteostasis to ameliorate protein misfolding and aggregation diseases: progress and prognosis. Cold Spring Harb Perspect Biol 3: a004507.
-
(2011)
Cold Spring Harb Perspect Biol
, vol.3
-
-
Lindquist, S.L.1
Kelly, J.W.2
-
5
-
-
0033200063
-
Protein misfolding, evolution and disease
-
Dobson CM, (1999) Protein misfolding, evolution and disease. Trends Biochem Sci 24: 329-332.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 329-332
-
-
Dobson, C.M.1
-
6
-
-
79960621436
-
Disulfide bonds reduce the toxicity of the amyloid fibrils formed by an extracellular protein
-
Mossuto MF, Bolognesi B, Guixer B, Dhulesia A, Agostini F, et al. (2011) Disulfide bonds reduce the toxicity of the amyloid fibrils formed by an extracellular protein. Angew Chem Int Ed Engl 50: 7048-7051.
-
(2011)
Angew Chem Int Ed Engl
, vol.50
, pp. 7048-7051
-
-
Mossuto, M.F.1
Bolognesi, B.2
Guixer, B.3
Dhulesia, A.4
Agostini, F.5
-
7
-
-
70349505749
-
Formation mechanism of insulin fibrils and structural aspects of the insulin fibrillation process
-
Groenning M, Frokjaer S, Vestergaard B, (2009) Formation mechanism of insulin fibrils and structural aspects of the insulin fibrillation process. Curr Protein Pept Sci 10: 509-528.
-
(2009)
Curr Protein Pept Sci
, vol.10
, pp. 509-528
-
-
Groenning, M.1
Frokjaer, S.2
Vestergaard, B.3
-
8
-
-
0037047118
-
The protofilament structure of insulin amyloid fibrils
-
Jimenez JL, Nettleton EJ, Bouchard M, Robinson CV, Dobson CM, et al. (2002) The protofilament structure of insulin amyloid fibrils. Proc Natl Acad Sci U S A 99: 9196-9201.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 9196-9201
-
-
Jimenez, J.L.1
Nettleton, E.J.2
Bouchard, M.3
Robinson, C.V.4
Dobson, C.M.5
-
9
-
-
78650982368
-
beta-microglobulin forms three-dimensional domain-swapped amyloid fibrils with disulfide linkages
-
Liu C, Sawaya MR, Eisenberg D, (2011) beta-microglobulin forms three-dimensional domain-swapped amyloid fibrils with disulfide linkages. Nat Struct Mol Biol 18: 49-55.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 49-55
-
-
Liu, C.1
Sawaya, M.R.2
Eisenberg, D.3
-
10
-
-
0036708005
-
The role of disulfide bond in the amyloidogenic state of beta(2)-microglobulin studied by heteronuclear NMR
-
Katou H, Kanno T, Hoshino M, Hagihara Y, Tanaka H, et al. (2002) The role of disulfide bond in the amyloidogenic state of beta(2)-microglobulin studied by heteronuclear NMR. Protein Sci 11: 2218-2229.
-
(2002)
Protein Sci
, vol.11
, pp. 2218-2229
-
-
Katou, H.1
Kanno, T.2
Hoshino, M.3
Hagihara, Y.4
Tanaka, H.5
-
12
-
-
1442356427
-
Role of disulfide bonds in the structure and activity of human insulin
-
Chang SG, Choi KD, Jang SH, Shin HC, (2003) Role of disulfide bonds in the structure and activity of human insulin. Mol Cells 16: 323-330.
-
(2003)
Mol Cells
, vol.16
, pp. 323-330
-
-
Chang, S.G.1
Choi, K.D.2
Jang, S.H.3
Shin, H.C.4
-
13
-
-
0023948509
-
Insulin as an amyloid-fibril protein at sites of repeated insulin injections in a diabetic patient
-
Dische FE, Wernstedt C, Westermark GT, Westermark P, Pepys MB, et al. (1988) Insulin as an amyloid-fibril protein at sites of repeated insulin injections in a diabetic patient. Diabetologia 31: 158-161.
-
(1988)
Diabetologia
, vol.31
, pp. 158-161
-
-
Dische, F.E.1
Wernstedt, C.2
Westermark, G.T.3
Westermark, P.4
Pepys, M.B.5
-
14
-
-
0023192941
-
Amyloid fibrils in human insulinoma and islets of Langerhans of the diabetic cat are derived from a neuropeptide-like protein also present in normal islet cells
-
Westermark P, Wernstedt C, Wilander E, Hayden DW, O'Brien TD, et al. (1987) Amyloid fibrils in human insulinoma and islets of Langerhans of the diabetic cat are derived from a neuropeptide-like protein also present in normal islet cells. Proc Natl Acad Sci U S A 84: 3881-3885.
-
(1987)
Proc Natl Acad Sci U S A
, vol.84
, pp. 3881-3885
-
-
Westermark, P.1
Wernstedt, C.2
Wilander, E.3
Hayden, D.W.4
O'Brien, T.D.5
-
15
-
-
67649397928
-
Bovine insulin filaments induced by reducing disulfide bonds show a different morphology, secondary structure, and cell toxicity from intact insulin amyloid fibrils
-
Zako T, Sakono M, Hashimoto N, Ihara M, Maeda M, (2009) Bovine insulin filaments induced by reducing disulfide bonds show a different morphology, secondary structure, and cell toxicity from intact insulin amyloid fibrils. Biophys J 96: 3331-3340.
-
(2009)
Biophys J
, vol.96
, pp. 3331-3340
-
-
Zako, T.1
Sakono, M.2
Hashimoto, N.3
Ihara, M.4
Maeda, M.5
-
16
-
-
0037082115
-
Redox processes of methionine relevant to beta-amyloid oxidation and Alzheimer's disease
-
Schoneich C, (2002) Redox processes of methionine relevant to beta-amyloid oxidation and Alzheimer's disease. Arch Biochem Biophys 397: 370-376.
-
(2002)
Arch Biochem Biophys
, vol.397
, pp. 370-376
-
-
Schoneich, C.1
-
17
-
-
0042347474
-
Three-dimensional structural interactions of insulin and its receptor
-
Yip CC, Ottensmeyer P, (2003) Three-dimensional structural interactions of insulin and its receptor. J Biol Chem 278: 27329-27332.
-
(2003)
J Biol Chem
, vol.278
, pp. 27329-27332
-
-
Yip, C.C.1
Ottensmeyer, P.2
-
18
-
-
73149108618
-
Molecular basis for insulin fibril assembly
-
Ivanova MI, Sievers SA, Sawaya MR, Wall JS, Eisenberg D, (2009) Molecular basis for insulin fibril assembly. Proc Natl Acad Sci U S A 106: 18990-18995.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 18990-18995
-
-
Ivanova, M.I.1
Sievers, S.A.2
Sawaya, M.R.3
Wall, J.S.4
Eisenberg, D.5
-
19
-
-
59849109485
-
A universal pathway for amyloid nucleus and precursor formation for insulin
-
Nayak A, Sorci M, Krueger S, Belfort G, (2009) A universal pathway for amyloid nucleus and precursor formation for insulin. Proteins 74: 556-565.
-
(2009)
Proteins
, vol.74
, pp. 556-565
-
-
Nayak, A.1
Sorci, M.2
Krueger, S.3
Belfort, G.4
-
20
-
-
33646130171
-
Inhibition of insulin fibrillogenesis with targeted peptides
-
Gibson TJ, Murphy RM, (2006) Inhibition of insulin fibrillogenesis with targeted peptides. Protein Sci 15: 1133-1141.
-
(2006)
Protein Sci
, vol.15
, pp. 1133-1141
-
-
Gibson, T.J.1
Murphy, R.M.2
-
21
-
-
0035902492
-
Probing the mechanism of insulin fibril formation with insulin mutants
-
Nielsen L, Frokjaer S, Brange J, Uversky VN, Fink AL, (2001) Probing the mechanism of insulin fibril formation with insulin mutants. Biochemistry 40: 8397-8409.
-
(2001)
Biochemistry
, vol.40
, pp. 8397-8409
-
-
Nielsen, L.1
Frokjaer, S.2
Brange, J.3
Uversky, V.N.4
Fink, A.L.5
-
22
-
-
0030959947
-
Toward Understanding Insulin Fibrillation
-
Brange J, Andersen L, Laursen ED, Meyn G, Rasmussen E, (1997) Toward Understanding Insulin Fibrillation. Journal of Pharmaceutical Sciences 86: 517-525.
-
(1997)
Journal of Pharmaceutical Sciences
, vol.86
, pp. 517-525
-
-
Brange, J.1
Andersen, L.2
Laursen, E.D.3
Meyn, G.4
Rasmussen, E.5
-
23
-
-
34249290108
-
Atomic structures of amyloid cross-beta spines reveal varied steric zippers
-
Sawaya MR, Sambashivan S, Nelson R, Ivanova MI, Sievers SA, et al. (2007) Atomic structures of amyloid cross-beta spines reveal varied steric zippers. Nature 447: 453-457.
-
(2007)
Nature
, vol.447
, pp. 453-457
-
-
Sawaya, M.R.1
Sambashivan, S.2
Nelson, R.3
Ivanova, M.I.4
Sievers, S.A.5
-
24
-
-
33645240208
-
A systematic screen of beta(2)-microglobulin and insulin for amyloid-like segments
-
Ivanova MI, Thompson MJ, Eisenberg D, (2006) A systematic screen of beta(2)-microglobulin and insulin for amyloid-like segments. Proc Natl Acad Sci U S A 103: 4079-4082.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 4079-4082
-
-
Ivanova, M.I.1
Thompson, M.J.2
Eisenberg, D.3
-
25
-
-
0036242430
-
Mapping the core of the beta(2)-microglobulin amyloid fibril by H/D exchange
-
Hoshino M, Katou H, Hagihara Y, Hasegawa K, Naiki H, et al. (2002) Mapping the core of the beta(2)-microglobulin amyloid fibril by H/D exchange. Nat Struct Biol 9: 332-336.
-
(2002)
Nat Struct Biol
, vol.9
, pp. 332-336
-
-
Hoshino, M.1
Katou, H.2
Hagihara, Y.3
Hasegawa, K.4
Naiki, H.5
-
26
-
-
77956205734
-
Quantitative methods for structural characterization of proteins based on deep UV resonance Raman spectroscopy
-
Shashilov VA, Sikirzhytski V, Popova LA, Lednev IK, (2010) Quantitative methods for structural characterization of proteins based on deep UV resonance Raman spectroscopy. Methods 52: 23-37.
-
(2010)
Methods
, vol.52
, pp. 23-37
-
-
Shashilov, V.A.1
Sikirzhytski, V.2
Popova, L.A.3
Lednev, I.K.4
-
27
-
-
34548710335
-
Probing the cross-beta core structure of amyloid fibrils by hydrogen-deuterium exchange deep ultraviolet resonance Raman spectroscopy
-
Xu M, Shashilov V, Lednev IK, (2007) Probing the cross-beta core structure of amyloid fibrils by hydrogen-deuterium exchange deep ultraviolet resonance Raman spectroscopy. J Am Chem Soc 129: 11002-11003.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 11002-11003
-
-
Xu, M.1
Shashilov, V.2
Lednev, I.K.3
-
28
-
-
85013746467
-
Protein NMR spectroscopy
-
New York, Academic Press
-
Cavanagh J, Fairbrother WJ, Palmer AG, Rance M, Skelton NJ, (2007) Protein NMR spectroscopy. New York Academic Press.
-
(2007)
-
-
Cavanagh, J.1
Fairbrother, W.J.2
Palmer, A.G.3
Rance, M.4
Skelton, N.J.5
-
29
-
-
0003919736
-
NMR of proteins and nucleic acids
-
New York, John Wiley and Son
-
Wuthrich K, (1986) NMR of proteins and nucleic acids. New York John Wiley and Son.
-
(1986)
-
-
Wuthrich, K.1
-
30
-
-
0003464051
-
Raman Spectroscopy in Biology: Principles and Applications
-
New York, Wiley
-
Tu AT, (1982) Raman Spectroscopy in Biology: Principles and Applications. New York Wiley.
-
(1982)
-
-
Tu, A.T.1
-
31
-
-
77958055499
-
Advanced statistical and numerical methods for spectroscopic characterization of protein structural evolution
-
Shashilov VA, Lednev IK, (2010) Advanced statistical and numerical methods for spectroscopic characterization of protein structural evolution. Chem Rev 110: 5692-5713.
-
(2010)
Chem Rev
, vol.110
, pp. 5692-5713
-
-
Shashilov, V.A.1
Lednev, I.K.2
-
32
-
-
69249175534
-
Vibrational Spectroscopy: Biological Applications of Ultraviolet Raman Spectroscopy
-
In: Uversky VN, Permyakov EA, editors
-
Lednev IK, (2007) Vibrational Spectroscopy: Biological Applications of Ultraviolet Raman Spectroscopy. In: Uversky VN, Permyakov EA, editors. Protein Structures, Methods in Protein Structures and Stability Analysis: Nova Science Publishers, Inc pp. 1-27.
-
(2007)
Protein Structures, Methods in Protein Structures and Stability Analysis: Nova Science Publishers, Inc
, pp. 1-27
-
-
Lednev, I.K.1
-
33
-
-
0036304350
-
Insulin at pH 2: structural analysis of the conditions promoting insulin fibre formation
-
Whittingham JL, Scott DJ, Chance K, Wilson A, Finch J, et al. (2002) Insulin at pH 2: structural analysis of the conditions promoting insulin fibre formation. J Mol Biol 318: 479-490.
-
(2002)
J Mol Biol
, vol.318
, pp. 479-490
-
-
Whittingham, J.L.1
Scott, D.J.2
Chance, K.3
Wilson, A.4
Finch, J.5
-
34
-
-
4444383210
-
A comparison of the dynamic behavior of monomeric and dimeric insulin shows structural rearrangements in the active monomer
-
Zoete V, Meuwly M, Karplus M, (2004) A comparison of the dynamic behavior of monomeric and dimeric insulin shows structural rearrangements in the active monomer. J Mol Biol 342: 913-929.
-
(2004)
J Mol Biol
, vol.342
, pp. 913-929
-
-
Zoete, V.1
Meuwly, M.2
Karplus, M.3
-
35
-
-
32544446167
-
Peptide secondary structure folding reaction coordinate: correlation between uv raman amide III frequency, Psi Ramachandran angle, and hydrogen bonding
-
Mikhonin AV, Bykov SV, Myshakina NS, Asher SA, (2006) Peptide secondary structure folding reaction coordinate: correlation between uv raman amide III frequency, Psi Ramachandran angle, and hydrogen bonding. J Phys Chem B 110: 1928-1943.
-
(2006)
J Phys Chem B
, vol.110
, pp. 1928-1943
-
-
Mikhonin, A.V.1
Bykov, S.V.2
Myshakina, N.S.3
Asher, S.A.4
-
36
-
-
33749818217
-
The Structural Biology of Protein Aggregation Diseases: Fundamental Questions and Some Answers
-
Eisenberg D, Nelson R, Sawaya MR, Balbirnie M, Sambashivan S, et al. (2006) The Structural Biology of Protein Aggregation Diseases: Fundamental Questions and Some Answers. Accounts of Chemical Research 39: 568-575.
-
(2006)
Accounts of Chemical Research
, vol.39
, pp. 568-575
-
-
Eisenberg, D.1
Nelson, R.2
Sawaya, M.R.3
Balbirnie, M.4
Sambashivan, S.5
-
37
-
-
77956812220
-
Direct observation and pH control of reversed supramolecular chirality in insulin fibrils by vibrational circular dichroism
-
Kurouski D, Lombardi RA, Dukor RK, Lednev IK, Nafie LA, (2010) Direct observation and pH control of reversed supramolecular chirality in insulin fibrils by vibrational circular dichroism. Chem Commun 46: 7154-7156.
-
(2010)
Chem Commun
, vol.46
, pp. 7154-7156
-
-
Kurouski, D.1
Lombardi, R.A.2
Dukor, R.K.3
Lednev, I.K.4
Nafie, L.A.5
-
38
-
-
0026951903
-
Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions
-
Piotto M, Saudek V, Sklenar V, (1992) Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J Biomol NMR 2: 661-665.
-
(1992)
J Biomol NMR
, vol.2
, pp. 661-665
-
-
Piotto, M.1
Saudek, V.2
Sklenar, V.3
-
39
-
-
33744991036
-
SideLink: automated side-chain assignment of biopolymers from NMR data by relative-hypothesis-prioritization-based simulated logic
-
Masse JE, Keller R, Pervushin K, (2006) SideLink: automated side-chain assignment of biopolymers from NMR data by relative-hypothesis-prioritization-based simulated logic. J Magn Reson 181: 45-67.
-
(2006)
J Magn Reson
, vol.181
, pp. 45-67
-
-
Masse, J.E.1
Keller, R.2
Pervushin, K.3
-
40
-
-
0025317134
-
Complete sequence-specific 1 H NMR assignments for human insulin
-
Kline AD, Justice RM Jr, (1990) Complete sequence-specific 1 H NMR assignments for human insulin. Biochemistry 29: 2906-2913.
-
(1990)
Biochemistry
, vol.29
, pp. 2906-2913
-
-
Kline, A.D.1
Justice Jr., R.M.2
-
41
-
-
13844254633
-
Deep-UV Raman spectrometer tunable between 193 and 205 nm for structural characterization of proteins
-
Lednev IK, Ermolenkov VV, He W, Xu M, (2005) Deep-UV Raman spectrometer tunable between 193 and 205 nm for structural characterization of proteins. Anal Bioanal Chem 381: 431-437.
-
(2005)
Anal Bioanal Chem
, vol.381
, pp. 431-437
-
-
Lednev, I.K.1
Ermolenkov, V.V.2
He, W.3
Xu, M.4
-
42
-
-
34247579524
-
The first step of hen egg white lysozyme fibrillation, irreversible partial unfolding, is a two-state transition
-
Xu M, Shashilov V, Ermolenkov VV, Fredriksen L, Zagorevski D, Lednev IK, (2007) The first step of hen egg white lysozyme fibrillation, irreversible partial unfolding, is a two-state transition. Protein Sci 16: 815-832.
-
(2007)
Protein Sci
, vol.16
, pp. 815-832
-
-
Xu, M.1
Shashilov, V.2
Ermolenkov, V.V.3
Fredriksen, L.4
Zagorevski, D.5
Lednev, I.K.6
-
44
-
-
0035789518
-
GROMACS 3.0: a package for molecular simulation and trajectory analysis
-
Lindahl E, Hess B, van der Spoel D, (2001) GROMACS 3.0: a package for molecular simulation and trajectory analysis. J Mol Model 7: 306-317.
-
(2001)
J Mol Model
, vol.7
, pp. 306-317
-
-
Lindahl, E.1
Hess, B.2
van der Spoel, D.3
-
45
-
-
4444282928
-
A Biomolecular Force Field Based of the Free Entahlpy of Hydration and Solvation: The GROMOCS Force-Field Parameter Sets 53A5 and 53A6
-
Oostenbrink C, Villa A, Mark AE, van Gunsteren, WF, (2004) A Biomolecular Force Field Based of the Free Entahlpy of Hydration and Solvation: The GROMOCS Force-Field Parameter Sets 53A5 and 53A6. J Comput Chem 25: 1656-1676.
-
(2004)
J Comput Chem
, vol.25
, pp. 1656-1676
-
-
Oostenbrink, C.1
Villa, A.2
Mark, A.E.3
van Gunsteren, W.F.4
-
46
-
-
84986440341
-
SETTLE: An analytical version of the SHAKE and RATTLE algorithms for rigid water models
-
Miyamoto S, Kollman PA, (1992) SETTLE: An analytical version of the SHAKE and RATTLE algorithms for rigid water models. J Comput Chem 13: 952-062.
-
(1992)
J Comput Chem
, vol.13
, pp. 062-952
-
-
Miyamoto, S.1
Kollman, P.A.2
-
47
-
-
0000388705
-
LINCS: A linear constraint solver for molecular simulations
-
Hess B, Bekker H, Berendsen HJC, Fraaije JGEM, (1997) LINCS: A linear constraint solver for molecular simulations. J Comp Chem 18: 1463-1472.
-
(1997)
J Comp Chem
, vol.18
, pp. 1463-1472
-
-
Hess, B.1
Bekker, H.2
Berendsen, H.J.C.3
Fraaije, J.G.E.M.4
-
48
-
-
33846823909
-
Particle mesh Ewald: An N•log(N) method for Ewald sums in large systems
-
Darden TA, York D, Pedersen L, (1993) Particle mesh Ewald: An N•log(N) method for Ewald sums in large systems. J Chem Phys 98: 10089-10092.
-
(1993)
J Chem Phys
, vol.98
, pp. 10089-10092
-
-
Darden, T.A.1
York, D.2
Pedersen, L.3
-
49
-
-
33646439285
-
Force-Induced Insulin Dimer Dissoaciation: A Molecular Dynamics Study
-
Kim T, Rhee A, Yip CM, (2006) Force-Induced Insulin Dimer Dissoaciation: A Molecular Dynamics Study. J Am Chem Soc 128: 5330-5331.
-
(2006)
J Am Chem Soc
, vol.128
, pp. 5330-5331
-
-
Kim, T.1
Rhee, A.2
Yip, C.M.3
-
50
-
-
0036191007
-
Models@home: distributed computing in bioinformatics using a screensaver based approach
-
Krieger E, Vriend G, (2002) 18: 315-318 (2002) Models@home: distributed computing in bioinformatics using a screensaver based approach. Bioinformatics.
-
(2002)
Bioinformatics
, vol.18
, pp. 315-318
-
-
Krieger, E.1
Vriend, G.2
-
51
-
-
70350266223
-
Purification, crystallization and preliminary X-ray diffraction studies of parakeet (Psittacula krameri) haemoglobin
-
Jaimohan SM, Naresh MD, Arumugam V, Mandal AB, (2009) Purification, crystallization and preliminary X-ray diffraction studies of parakeet (Psittacula krameri) haemoglobin. Acta Crystallogr Sect F Struct Biol Cryst Commun 65: 1027-1029.
-
(2009)
Acta Crystallogr Sect F Struct Biol Cryst Commun
, vol.65
, pp. 1027-1029
-
-
Jaimohan, S.M.1
Naresh, M.D.2
Arumugam, V.3
Mandal, A.B.4
|