-
1
-
-
77951776829
-
Alzheimer's disease: Strategies for disease modification
-
Citron, M. Alzheimer's disease: Strategies for disease modification Nat. Rev. Drug Discov. 2010, 9, 387-398
-
(2010)
Nat. Rev. Drug Discov.
, vol.9
, pp. 387-398
-
-
Citron, M.1
-
2
-
-
78449272415
-
γ-Secretase and human disease
-
Kelleher, R. J., III; Shen, J. γ-Secretase and human disease Science 2010, 330, 1055-1056
-
(2010)
Science
, vol.330
, pp. 1055-1056
-
-
Kelleher III, R.J.1
Shen, J.2
-
3
-
-
77955934713
-
Is BACE1 a suitable therapeutic target for the treatment of Alzheimer's disease? Current strategies and future directions
-
Klaver, D. W.; Wilce, M. C.; Cui, H.; Hung, A. C.; Gasperini, R.; Foa, L.; Small, D. H. Is BACE1 a suitable therapeutic target for the treatment of Alzheimer's disease? Current strategies and future directions Biol. Chem. 2010, 391, 849-859
-
(2010)
Biol. Chem.
, vol.391
, pp. 849-859
-
-
Klaver, D.W.1
Wilce, M.C.2
Cui, H.3
Hung, A.C.4
Gasperini, R.5
Foa, L.6
Small, D.H.7
-
4
-
-
67651047153
-
Progress in the development of nonpeptidomimetic BACE 1 inhibitors for Alzheimer's disease
-
Huang, W. H.; Sheng, R.; Hu, Y. Z. Progress in the development of nonpeptidomimetic BACE 1 inhibitors for Alzheimer's disease Curr. Med. Chem. 2009, 16, 1806-1820
-
(2009)
Curr. Med. Chem.
, vol.16
, pp. 1806-1820
-
-
Huang, W.H.1
Sheng, R.2
Hu, Y.Z.3
-
5
-
-
33748308883
-
Targeting proteases: Successes, failures and future prospects
-
DOI 10.1038/nrd2092, PII NRD2092
-
Turk, B. Targeting proteases: Successes, failures and future prospects Nat. Rev. Drug Discov. 2006, 5, 785-799 (Pubitemid 44323703)
-
(2006)
Nature Reviews Drug Discovery
, vol.5
, Issue.9
, pp. 785-799
-
-
Turk, B.1
-
6
-
-
77956013896
-
Effect of the protonation state of the titratable residues on the inhibitor affinity to BACE-1
-
Domínguez, J. L.; Christopeit, T.; Villaverde, M. C.; Gossas, T.; Otero, J. M.; Nystrom, S.; Baraznenok, V.; Lindstrom, E.; Danielson, U. H.; Sussman, F. Effect of the protonation state of the titratable residues on the inhibitor affinity to BACE-1 Biochemistry 2010, 49, 7255-7263
-
(2010)
Biochemistry
, vol.49
, pp. 7255-7263
-
-
Domínguez, J.L.1
Christopeit, T.2
Villaverde, M.C.3
Gossas, T.4
Otero, J.M.5
Nystrom, S.6
Baraznenok, V.7
Lindstrom, E.8
Danielson, U.H.9
Sussman, F.10
-
7
-
-
0347694970
-
Determination of the Active Site Protonation State of β-Secretase from Molecular Dynamics Simulation and Docking Experiment: Implications for Structure-Based Inhibitor Design
-
DOI 10.1021/ja0304493
-
Park, H.; Lee, S. Determination of the active site protonation state of β-secretase from molecular dynamics simulation and docking experiment: implications for structure-based inhibitor design J. Am. Chem. Soc. 2003, 125, 16416-16422 (Pubitemid 38020666)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.52
, pp. 16416-16422
-
-
Park, H.1
Lee, S.2
-
8
-
-
0034613320
-
Structure of the protease domain of memapsin 2 (β-secretase) complexed with inhibitor
-
Hong, L.; Koelsch, G.; Lin, X.; Wu, S.; Terzyan, S.; Ghosh, A. K.; Zhang, X. C.; Tang, J. Structure of the protease domain of memapsin 2 (β-secretase) complexed with inhibitor Science 2000, 290, 150-153
-
(2000)
Science
, vol.290
, pp. 150-153
-
-
Hong, L.1
Koelsch, G.2
Lin, X.3
Wu, S.4
Terzyan, S.5
Ghosh, A.K.6
Zhang, X.C.7
Tang, J.8
-
9
-
-
4744338363
-
Modeling the protonation states of the catalytic aspartates in β-secretase
-
DOI 10.1021/jm049817j
-
Rajamani, R.; Reynolds, C. H. Modeling the protonation states of the catalytic aspartates in β-secretase J. Med. Chem. 2004, 47, 5159-5166 (Pubitemid 39314913)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.21
, pp. 5159-5166
-
-
Rajamani, R.1
Reynolds, C.H.2
-
10
-
-
20144369541
-
Virtual screening for β-secretase (BACE1) inhibitors reveals the importance of protonation states at Asp32 and Asp228
-
DOI 10.1021/jm049133b
-
Polgár, T.; Keserü, G. M. Virtual screening for β-secretase (BACE1) inhibitors reveals the importance of protonation states at Asp32 and Asp228 J. Med. Chem. 2005, 48, 3749-3755 (Pubitemid 40776849)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.11
, pp. 3749-3755
-
-
Polgar, T.1
Keseru, G.M.2
-
11
-
-
26444552906
-
Functional plasticity in the substrate binding site of β-secretase
-
DOI 10.1016/j.str.2005.06.015, PII S0969212605002753
-
Gorfe, A. A.; Caflisch, A. Functional plasticity in the substrate binding site of β-secretase Structure 2005, 13, 1487-1498 (Pubitemid 41427588)
-
(2005)
Structure
, vol.13
, Issue.10
, pp. 1487-1498
-
-
Gorfe, A.A.1
Caflisch, A.2
-
12
-
-
34548392290
-
Ensemble-docking approach on BACE-1: Pharmacophore perception and guidelines for drug design
-
Limongelli, V.; Marinelli, L.; Cosconati, S.; Braun, H. A.; Schmidt, B.; Novellino, E. Ensemble-docking approach on BACE-1: Pharmacophore perception and guidelines for drug design ChemMedChem 2007, 2, 667-678
-
(2007)
ChemMedChem
, vol.2
, pp. 667-678
-
-
Limongelli, V.1
Marinelli, L.2
Cosconati, S.3
Braun, H.A.4
Schmidt, B.5
Novellino, E.6
-
13
-
-
77951992987
-
Ensemble docking into multiple crystallographically derived protein structures: An evaluation based on the statistical analysis of enrichments
-
Craig, I. R.; Essex, J. W.; Spiegel, K. Ensemble docking into multiple crystallographically derived protein structures: an evaluation based on the statistical analysis of enrichments J. Chem. Inf. Model. 2010, 50, 511-524
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 511-524
-
-
Craig, I.R.1
Essex, J.W.2
Spiegel, K.3
-
14
-
-
33746924045
-
Ensemble docking into flexible active sites. Critical evaluation of FlexE against JNK-3 and β-secretase
-
DOI 10.1021/ci050412x
-
Polgár, T.; Keserü, G. M. Ensemble docking into flexible active sites. Critical evaluation of FlexE against JNK-3 and β-secretase J. Chem. Inf. Model. 2006, 46, 1795-1805 (Pubitemid 44185704)
-
(2006)
Journal of Chemical Information and Modeling
, vol.46
, Issue.4
, pp. 1795-1805
-
-
Polgar, T.1
Keseru, G.M.2
-
15
-
-
34548448617
-
Structure-guided design of β-secretase (BACE-1) inhibitors
-
DOI 10.1517/17460441.2.8.1129
-
McGaughey, G. B.; Holloway, M. K. Structure-guided design of β-secretase (BACE-1) inhibitors Expert Opin. Drug Dis. 2007, 2, 1129-1138 (Pubitemid 47354335)
-
(2007)
Expert Opinion on Drug Discovery
, vol.2
, Issue.8
, pp. 1129-1138
-
-
McGaughey, G.B.1
Holloway, M.K.2
-
16
-
-
62249167406
-
Boom in the development of non-peptidic β-secretase (BACE1) inhibitors for the treatment of Alzheimer's disease
-
Silvestri, R. Boom in the development of non-peptidic β-secretase (BACE1) inhibitors for the treatment of Alzheimer's disease Med. Res. Rev. 2009, 29, 295-338
-
(2009)
Med. Res. Rev.
, vol.29
, pp. 295-338
-
-
Silvestri, R.1
-
17
-
-
0037203973
-
Designing non-peptide peptidomimetics in the 21st century: Inhibitors targeting conformational ensembles
-
DOI 10.1021/jm010425b
-
Bursavich, M. G.; Rich, D. H. Designing non-peptide peptidomimetics in the 21st century:Inhibitors targeting conformational ensembles J. Med. Chem. 2002, 45, 541-558 (Pubitemid 34145701)
-
(2002)
Journal of Medicinal Chemistry
, vol.45
, Issue.3
, pp. 541-558
-
-
Bursavich, M.G.1
Rich, D.H.2
-
18
-
-
33751504561
-
Assigning the protonation states of the key aspartates in β-secretase using QM/MM X-ray structure refinement
-
Yu, N.; Hayik, S. A.; Wang, B.; Liao, N.; Reynolds, C. H.; Merz, K. M. Assigning the protonation states of the key aspartates in β-secretase using QM/MM X-ray structure refinement J. Chem. Theory Comput. 2006, 2, 1057-1069
-
(2006)
J. Chem. Theory Comput.
, vol.2
, pp. 1057-1069
-
-
Yu, N.1
Hayik, S.A.2
Wang, B.3
Liao, N.4
Reynolds, C.H.5
Merz, K.M.6
-
19
-
-
77951228927
-
On the orientation of the catalytic dyad in aspartic proteases
-
Friedman, R.; Caflisch, A. On the orientation of the catalytic dyad in aspartic proteases Proteins 2010, 78, 1575-1582
-
(2010)
Proteins
, vol.78
, pp. 1575-1582
-
-
Friedman, R.1
Caflisch, A.2
-
20
-
-
23044513878
-
Comparing protein-ligand docking programs is difficult
-
DOI 10.1002/prot.20497
-
Cole, J. C.; Murray, C. W.; Nissink, J. W.; Taylor, R. D.; Taylor, R. Comparing protein-ligand docking programs is difficult Proteins 2005, 60, 325-332 (Pubitemid 41061629)
-
(2005)
Proteins: Structure, Function and Genetics
, vol.60
, Issue.3
, pp. 325-332
-
-
Cole, J.C.1
Murray, C.W.2
Nissink, J.W.M.3
Taylor, R.D.4
Taylor, R.5
-
21
-
-
8844263008
-
Docking and scoring in virtual screening for drug discovery: Methods and applications
-
DOI 10.1038/nrd1549
-
Kitchen, D. B.; Decornez, H.; Furr, J. R.; Bajorath, J. Docking and scoring in virtual screening for drug discovery: Methods and applications Nat. Rev. Drug Discov. 2004, 3, 935-949 (Pubitemid 39529931)
-
(2004)
Nature Reviews Drug Discovery
, vol.3
, Issue.11
, pp. 935-949
-
-
Kitchen, D.B.1
Decornez, H.2
Furr, J.R.3
Bajorath, J.4
-
22
-
-
34247272948
-
Evaluating virtual screening methods: Good and bad metrics for the "early recognition" problem
-
DOI 10.1021/ci600426e
-
Truchon, J. F.; Bayly, C. I. Evaluating virtual screening methods:Good and bad metrics for the early recognition problem J. Chem. Inf. Model. 2007, 47, 488-508 (Pubitemid 46615951)
-
(2007)
Journal of Chemical Information and Modeling
, vol.47
, Issue.2
, pp. 488-508
-
-
Truchon, J.-F.1
Bayly, C.I.2
-
23
-
-
79956201474
-
Systematic exploitation of multiple receptor conformations for virtual ligand screening
-
Bottegoni, G.; Rocchia, W.; Rueda, M.; Abagyan, R.; Cavalli, A. Systematic exploitation of multiple receptor conformations for virtual ligand screening PLoS ONE 2011, 6, e18845
-
(2011)
PLoS ONE
, vol.6
, pp. 18845
-
-
Bottegoni, G.1
Rocchia, W.2
Rueda, M.3
Abagyan, R.4
Cavalli, A.5
-
24
-
-
37849034064
-
Atomic property fields: Generalized 3D pharmacophoric potential for automated ligand superposition, pharmacophore elucidation and 3D QSAR
-
Totrov, M. Atomic property fields: Generalized 3D pharmacophoric potential for automated ligand superposition, pharmacophore elucidation and 3D QSAR Chem. Biol. Drug. Des. 2008, 71, 15-27
-
(2008)
Chem. Biol. Drug. Des.
, vol.71
, pp. 15-27
-
-
Totrov, M.1
-
25
-
-
75749093371
-
Recipes for the selection of experimental protein conformations for virtual screening
-
Rueda, M.; Bottegoni, G.; Abagyan, R. Recipes for the selection of experimental protein conformations for virtual screening J. Chem. Inf. Model. 2010, 50, 186-193
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 186-193
-
-
Rueda, M.1
Bottegoni, G.2
Abagyan, R.3
|