-
1
-
-
42249109450
-
Serine peptidases: Classification, structure and function
-
18259688
-
Serine peptidases: classification, structure and function. Page MJ, Di Cera E, Cell Mol Life Sci 2008 65 7-8 1220 1236 18259688
-
(2008)
Cell Mol Life Sci
, vol.65
, Issue.7-8
, pp. 1220-1236
-
-
Page, M.J.1
Di Cera, E.2
-
2
-
-
0036882394
-
Serine protease mechanism and specificity
-
10.1021/cr000033x 12475199
-
Serine protease mechanism and specificity. Hedstrom L, Chem Rev 2002 102 12 4501 4524 10.1021/cr000033x 12475199
-
(2002)
Chem Rev
, vol.102
, Issue.12
, pp. 4501-4524
-
-
Hedstrom, L.1
-
3
-
-
57649165535
-
Evolution of peptidase diversity
-
10.1074/jbc.M804650200 18768474
-
Evolution of peptidase diversity. Page MJ, Di Cera E, J Biol Chem 2008 283 44 30010 30014 10.1074/jbc.M804650200 18768474
-
(2008)
J Biol Chem
, vol.283
, Issue.44
, pp. 30010-30014
-
-
Page, M.J.1
Di Cera, E.2
-
5
-
-
27144523783
-
The catalytic triad of serine peptidases
-
DOI 10.1007/s00018-005-5160-x
-
The catalytic triad of serine peptidases. Polgar L, Cell Mol Life Sci 2005 62 19-20 2161 2172 16003488 (Pubitemid 41500536)
-
(2005)
Cellular and Molecular Life Sciences
, vol.62
, Issue.19-20
, pp. 2161-2172
-
-
Polgar, L.1
-
6
-
-
67650361071
-
Serine proteases
-
10.1002/iub.186 19180666
-
Serine proteases. Di Cera E, IUBMB Life 2009 61 5 510 515 10.1002/iub.186 19180666
-
(2009)
IUBMB Life
, vol.61
, Issue.5
, pp. 510-515
-
-
Di Cera, E.1
-
7
-
-
0014211618
-
On the size of the active site in proteases
-
10.1016/S0006-291X(67)80055-X
-
On the size of the active site in proteases. Schechter I, Berger A, I. Papain. Biochem Biophys Res Commun 1967 27 2 157 162 10.1016/S0006-291X(67) 80055-X
-
(1967)
I. Papain. Biochem Biophys Res Commun
, vol.27
, Issue.2
, pp. 157-162
-
-
Schechter, I.1
Berger, A.2
-
8
-
-
28444470134
-
Determinants of specificity in coagulation proteases
-
DOI 10.1111/j.1538-7836.2005.01456.x
-
Determinants of specificity in coagulation proteases. Page MJ, Macgillivray RT, Di Cera E, J Thromb Haemost 2005 3 11 2401 2408 10.1111/j.1538-7836.2005.01456.x 16241939 (Pubitemid 41727155)
-
(2005)
Journal of Thrombosis and Haemostasis
, vol.3
, Issue.11
, pp. 2401-2408
-
-
Page, M.J.1
Macgillivray, R.T.A.2
Di Cera, E.3
-
9
-
-
11744288074
-
Structure and activation of trypsinogen and chymotrypsinogen
-
13480362
-
Structure and activation of trypsinogen and chymotrypsinogen. Neurath H, Dixon GH, Fed Proc 1957 16 3 791 801 13480362
-
(1957)
Fed Proc
, vol.16
, Issue.3
, pp. 791-801
-
-
Neurath, H.1
Dixon, G.H.2
-
10
-
-
0017419824
-
The digestive enzymes of the pancreas: A mixture of inconstant proportions
-
10.1146/annurev.ph.39.030177.002105 322600
-
The digestive enzymes of the pancreas: a mixture of inconstant proportions. Rothman SS, Annu Rev Physiol 1977 39 373 389 10.1146/annurev.ph.39. 030177.002105 322600
-
(1977)
Annu Rev Physiol
, vol.39
, pp. 373-389
-
-
Rothman, S.S.1
-
11
-
-
0343056548
-
Blood coagulation, inflammation, and defense
-
IRL Press, Oxford
-
Blood coagulation, inflammation, and defense. O'Brien D, McVey J, et al. The Natural Immune System: Humoral Factors IRL Press, Oxford 1993 257 280
-
(1993)
The Natural Immune System: Humoral Factors
, pp. 257-280
-
-
O'Brien, D.1
McVey, J.2
-
14
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
DOI 10.1093/nar/gkg520
-
SWISS-MODEL: An automated protein homology-modeling server. Schwede T, Kopp J, Guex N, Peitsch MC, Nucleic Acids Res 2003 31 13 3381 3385 10.1093/nar/gkg520 12824332 (Pubitemid 37442164)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
15
-
-
0035889689
-
Linear programming optimization and a double statistical filter for protein threading protocols
-
DOI 10.1002/prot.1145
-
Linear programming optimization and a double statistical filter for protein threading protocols. Meller J, Elber R, Proteins 2001 45 3 241 261 10.1002/prot.1145 11599028 (Pubitemid 32988586)
-
(2001)
Proteins: Structure, Function and Genetics
, vol.45
, Issue.3
, pp. 241-261
-
-
Meller, J.1
Elber, R.2
-
16
-
-
84865801914
-
Modeling and structural analysis of evolutionarily diverse S8 family serine proteases
-
10.6026/97320630007239 22125392
-
Modeling and structural analysis of evolutionarily diverse S8 family serine proteases. Laskar A, Rodger E, Chatterjee A, Mandal C, Bioinformation 2011 7 5 239 245 10.6026/97320630007239 22125392
-
(2011)
Bioinformation
, vol.7
, Issue.5
, pp. 239-245
-
-
Laskar, A.1
Rodger, E.2
Chatterjee, A.3
Mandal, C.4
-
17
-
-
84865740242
-
-
Molecular Simulations Inc. San Diego, USA
-
Insight II, Modeling Environment Molecular Simulations Inc., San Diego, USA 2005
-
(2005)
Modeling Environment
-
-
Insight, I.I.1
-
18
-
-
0042511005
-
A graph-theory algorithm for rapid protein side-chain prediction
-
DOI 10.1110/ps.03154503
-
A graph-theory algorithm for rapid protein side-chain prediction. Canutescu AA, Shelenkov AA, Dunbrack RL, Protein Sci 2003 12 9 2001 2014 10.1110/ps.03154503 12930999 (Pubitemid 37022822)
-
(2003)
Protein Science
, vol.12
, Issue.9
, pp. 2001-2014
-
-
Canutescu, A.A.1
Shelenkov, A.A.2
Dunbrack Jr., R.L.3
-
19
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
10.1107/S0021889892009944
-
PROCHECK: A program to check the stereochemical quality of protein structures. Laskowski RA, J Applied Cryst 1993 26 283 291 10.1107/ S0021889892009944
-
(1993)
J Applied Cryst
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
-
20
-
-
3242886389
-
MOLPROBITY: Structure validation and all-atom contact analysis for nucleic acids and their complexes
-
15215462
-
MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes. Davis IW, Murray LW, Richardson JS, Richardson DC, Nucleic Acids Res 2004 32 Web Server issue 615 619 15215462
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 23615-23619
-
-
Davis, I.W.1
Murray, L.W.2
Richardson, J.S.3
Richardson, D.C.4
-
21
-
-
0026610767
-
Assessment of protein models with three-dimensional profiles
-
10.1038/356083a0 1538787
-
Assessment of protein models with three-dimensional profiles. Luthy R, Bowie JU, Eisenberg D, Nature 1992 356 6364 83 85 10.1038/356083a0 1538787
-
(1992)
Nature
, vol.356
, Issue.6364
, pp. 83-85
-
-
Luthy, R.1
Bowie, J.U.2
Eisenberg, D.3
-
22
-
-
34547566446
-
ProSA-web: Interactive web service for the recognition of errors in three-dimensional structures of proteins
-
17517781
-
ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins. Wiederstein M, Sippl MJ, Nucleic Acids Res 2007 35 Web Server issue 407 410 17517781
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 23407-23410
-
-
Wiederstein, M.1
Sippl, M.J.2
-
23
-
-
0027180507
-
Verification of protein structures: Patterns of nonbonded atomic interactions
-
Verification of protein structures: patterns of nonbonded atomic interactions. Colovos C, Yeates TO, Protein Sci 1993 2 9 1511 1519 10.1002/pro.5560020916 8401235 (Pubitemid 23262844)
-
(1993)
Protein Science
, vol.2
, Issue.9
, pp. 1511-1519
-
-
Colovos, C.1
Yeates, T.O.2
-
24
-
-
77955011709
-
Sub-AQUA: Real-value quality assessment of protein structure models
-
10.1093/protein/gzq030 20525730
-
Sub-AQUA: real-value quality assessment of protein structure models. Yang YD, Spratt P, Chen H, Park C, Kihara D, Protein Eng Des Sel 2010 23 8 617 632 10.1093/protein/gzq030 20525730
-
(2010)
Protein Eng des Sel
, vol.23
, Issue.8
, pp. 617-632
-
-
Yang, Y.D.1
Spratt, P.2
Chen, H.3
Park, C.4
Kihara, D.5
-
25
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
DOI 10.1016/0263-7855(96)00009-4
-
MOLMOL: a program for display and analysis of macromolecular structures. Koradi R, Billeter M, Wuthrich K, J Mol Graph 1996 14 1 51 55 29-32 10.1016/0263-7855(96)00009-4 8744573 (Pubitemid 26152976)
-
(1996)
Journal of Molecular Graphics
, vol.14
, Issue.1
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wuthrich, K.3
-
26
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Thompson JD, Higgins DG, Gibson TJ, Nucleic Acids Res 1994 22 22 4673 4680 10.1093/nar/22.22.4673 7984417 (Pubitemid 24354800)
-
(1994)
Nucleic Acids Research
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
27
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
10.1016/S0168-9525(00)02024-2 10827456
-
EMBOSS: the European Molecular Biology Open Software Suite. Rice P, Longden I, Bleasby A, Trends Genet 2000 16 6 276 277 10.1016/S0168-9525(00) 02024-2 10827456
-
(2000)
Trends Genet
, vol.16
, Issue.6
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
28
-
-
0030896832
-
Subtilases: The superfamily of subtilisin-like serine proteases
-
Subtilases: the superfamily of subtilisin-like serine proteases. Siezen RJ, Leunissen JA, Protein Sci 1997 6 3 501 523 9070434 (Pubitemid 27120048)
-
(1997)
Protein Science
, vol.6
, Issue.3
, pp. 501-523
-
-
Siezen, R.J.1
Leunissen, J.A.M.2
-
29
-
-
0013955339
-
Histidine sequences in the active centres of some 'serine' proteinases
-
5971785
-
Histidine sequences in the active centres of some 'serine' proteinases. Smillie LB, Hartley BS, Biochem J 1966 101 1 232 241 5971785
-
(1966)
Biochem J
, vol.101
, Issue.1
, pp. 232-241
-
-
Smillie, L.B.1
Hartley, B.S.2
-
30
-
-
4544222062
-
Effects of lipoprotein overproduction on the induction of DegP (HtrA) involved in quality control in the Escherichia coli periplasm
-
DOI 10.1074/jbc.M406390200
-
Effects of lipoprotein overproduction on the induction of DegP (HtrA) involved in quality control in the Escherichia coli periplasm. Miyadai H, Tanaka-Masuda K, Matsuyama S, Tokuda H, J Biol Chem 2004 279 38 39807 39813 10.1074/jbc.M406390200 15252048 (Pubitemid 39258251)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.38
, pp. 39807-39813
-
-
Miyadai, H.1
Tanaka-Masuda, K.2
Matsuyama, S.-I.3
Tokuda, H.4
-
31
-
-
0025329212
-
Crystal structure of thermitase at 1.4 A resolution
-
DOI 10.1016/0022-2836(90)90160-N
-
Crystal structure of thermitase at 1.4 A resolution. Teplyakov AV, Kuranova IP, Harutyunyan EH, Vainshtein BK, Frommel C, Hohne WE, Wilson KS, J Mol Biol 1990 214 1 261 279 10.1016/0022-2836(90)90160-N 2196375 (Pubitemid 20231223)
-
(1990)
Journal of Molecular Biology
, vol.214
, Issue.1
, pp. 261-279
-
-
Teplyakov, A.V.1
Kuranova, I.2
Harutyunyan, E.H.3
Vainshtein, B.K.4
Frommel, C.5
Hohne, W.E.6
Wilson, K.S.7
-
32
-
-
0025998717
-
Homology modelling and protein engineering strategy of subtilases, the family of subtilisin-like serine proteinases
-
10.1093/protein/4.7.719 1798697
-
Homology modelling and protein engineering strategy of subtilases, the family of subtilisin-like serine proteinases. Siezen RJ, de Vos WM, Leunissen JA, Dijkstra BW, Protein Eng 1991 4 7 719 737 10.1093/protein/4.7.719 1798697
-
(1991)
Protein Eng
, vol.4
, Issue.7
, pp. 719-737
-
-
Siezen, R.J.1
De Vos, W.M.2
Leunissen, J.A.3
Dijkstra, B.W.4
-
33
-
-
63049132799
-
The yeast HtrA orthologue Ynm3 is a protease with chaperone activity that aids survival under heat stress
-
10.1091/mbc.E08-02-0178 18946088
-
The yeast HtrA orthologue Ynm3 is a protease with chaperone activity that aids survival under heat stress. Padmanabhan N, Fichtner L, Dickmanns A, Ficner R, Schulz JB, Braus GH, Mol Biol Cell 2009 20 1 68 77 10.1091/mbc.E08-02-0178 18946088
-
(2009)
Mol Biol Cell
, vol.20
, Issue.1
, pp. 68-77
-
-
Padmanabhan, N.1
Fichtner, L.2
Dickmanns, A.3
Ficner, R.4
Schulz, J.B.5
Braus, G.H.6
-
34
-
-
81755174173
-
The structural basis of mode of activation and functional diversity: A case study with HtrA family of serine proteases
-
10.1016/j.abb.2011.10.007 22027029
-
The structural basis of mode of activation and functional diversity: a case study with HtrA family of serine proteases. Singh N, Kuppili RR, Bose K, Arch Biochem Biophys 2011 516 2 85 96 10.1016/j.abb.2011.10.007 22027029
-
(2011)
Arch Biochem Biophys
, vol.516
, Issue.2
, pp. 85-96
-
-
Singh, N.1
Kuppili, R.R.2
Bose, K.3
-
35
-
-
79951967246
-
HTRA proteases: Regulated proteolysis in protein quality control
-
21326199
-
HTRA proteases: regulated proteolysis in protein quality control. Clausen T, Kaiser M, Huber R, Ehrmann M, Nat Rev Mol Cell Biol 2011 12 3 152 162 21326199
-
(2011)
Nat Rev Mol Cell Biol
, vol.12
, Issue.3
, pp. 152-162
-
-
Clausen, T.1
Kaiser, M.2
Huber, R.3
Ehrmann, M.4
-
36
-
-
45549098563
-
Interplay of PDZ and protease domain of DegP ensures efficient elimination of misfolded proteins
-
DOI 10.1073/pnas.0803392105
-
Interplay of PDZ and protease domain of DegP ensures efficient elimination of misfolded proteins. Krojer T, Pangerl K, Kurt J, Sawa J, Stingl C, Mechtler K, Huber R, Ehrmann M, Clausen T, Proc Natl Acad Sci U S A 2008 105 22 7702 7707 10.1073/pnas.0803392105 18505836 (Pubitemid 351872702)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.22
, pp. 7702-7707
-
-
Krojer, T.1
Pangerl, K.2
Kurt, J.3
Sawa, J.4
Stingl, C.5
Mechtler, K.6
Huber, R.7
Ehrmann, M.8
Clausen, T.9
-
37
-
-
0028958071
-
Structural features that stabilize halophilic malate dehydrogenase from an archaebacterium
-
10.1126/science.267.5202.1344 17812611
-
Structural features that stabilize halophilic malate dehydrogenase from an archaebacterium. Dym O, Mevarech M, Sussman JL, Science 1995 267 5202 1344 1346 10.1126/science.267.5202.1344 17812611
-
(1995)
Science
, vol.267
, Issue.5202
, pp. 1344-1346
-
-
Dym, O.1
Mevarech, M.2
Sussman, J.L.3
|