메뉴 건너뛰기




Volumn 120-121, Issue , 2012, Pages 54-58

Deep sequencing-based transcriptome profiling analysis of Oryzias melastigma exposed to PFOS

Author keywords

Digital gene expression; Mitochondrial dysfunction; Oryzias melastigma; PFOS; Transcriptome

Indexed keywords

PERFLUOROOCTANESULFONIC ACID; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; RNA; TRANSCRIPTOME; UNCOUPLING PROTEIN 2;

EID: 84861169493     PISSN: 0166445X     EISSN: 18791514     Source Type: Journal    
DOI: 10.1016/j.aquatox.2012.04.013     Document Type: Article
Times cited : (60)

References (39)
  • 1
    • 0030681260 scopus 로고    scopus 로고
    • The significance of digital gene expression profiles
    • Audic S., Claverie J.M. The significance of digital gene expression profiles. Genome Research 1997, 7:986-995.
    • (1997) Genome Research , vol.7 , pp. 986-995
    • Audic, S.1    Claverie, J.M.2
  • 6
    • 79959300621 scopus 로고    scopus 로고
    • Applications of next generation sequencing in molecular ecology of non-model organisms
    • Ekblom R., Galindo J. Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity (Edinb) 2011, 107:1-15.
    • (2011) Heredity (Edinb) , vol.107 , pp. 1-15
    • Ekblom, R.1    Galindo, J.2
  • 7
    • 80155135289 scopus 로고    scopus 로고
    • PFOS elicits transcriptional responses of the ER, AHR and PPAR pathways in Oryzias melastigma in a stage-specific manner
    • Fang C., Wu X., Huang Q., Liao Y., Liu L., Qiu L., Shen H., Dong S. PFOS elicits transcriptional responses of the ER, AHR and PPAR pathways in Oryzias melastigma in a stage-specific manner. Aquatic Toxicology 2012, 106-107:9-19.
    • (2012) Aquatic Toxicology , pp. 9-19
    • Fang, C.1    Wu, X.2    Huang, Q.3    Liao, Y.4    Liu, L.5    Qiu, L.6    Shen, H.7    Dong, S.8
  • 9
    • 46749102446 scopus 로고    scopus 로고
    • Toxicity evaluation of perfluorooctane sulfonate (PFOS) in the liver of common carp (Cyprinus carpio)
    • Hagenaars A., Knapen D., Meyer I.J., van der Ven K., Hoff P., De Coen W. Toxicity evaluation of perfluorooctane sulfonate (PFOS) in the liver of common carp (Cyprinus carpio). Aquatic Toxicology 2008, 88:155-163.
    • (2008) Aquatic Toxicology , vol.88 , pp. 155-163
    • Hagenaars, A.1    Knapen, D.2    Meyer, I.J.3    van der Ven, K.4    Hoff, P.5    De Coen, W.6
  • 10
    • 0029083510 scopus 로고
    • The influence of salinity on the toxicity of various classes of chemicals to aquatic biota
    • Hall L.W., Anderson R.D. The influence of salinity on the toxicity of various classes of chemicals to aquatic biota. Critical Reviews in Toxicology 1995, 25:281-346.
    • (1995) Critical Reviews in Toxicology , vol.25 , pp. 281-346
    • Hall, L.W.1    Anderson, R.D.2
  • 11
    • 79959472680 scopus 로고    scopus 로고
    • The first insight into the tissue specific taxus transcriptome via Illumina second generation sequencing
    • Hao da C., Ge G., Xiao P., Zhang Y., Yang L. The first insight into the tissue specific taxus transcriptome via Illumina second generation sequencing. PLoS One 2011, 6:e21220.
    • (2011) PLoS One , vol.6
    • Hao da, C.1    Ge, G.2    Xiao, P.3    Zhang, Y.4    Yang, L.5
  • 12
    • 0037371019 scopus 로고    scopus 로고
    • Perfluorooctane sulfonic acid in bib (Trisopterus luscus) and plaice (Pleuronectes platessa) from the Western Scheldt and the Belgian North Sea: distribution and biochemical effects
    • Hoff P.T., Van de Vijver K., Van Dongen W., Esmans E.L., Blust R., De Coen W.M. Perfluorooctane sulfonic acid in bib (Trisopterus luscus) and plaice (Pleuronectes platessa) from the Western Scheldt and the Belgian North Sea: distribution and biochemical effects. Environmental Toxicology and Chemistry 2003, 22:608-614.
    • (2003) Environmental Toxicology and Chemistry , vol.22 , pp. 608-614
    • Hoff, P.T.1    Van de Vijver, K.2    Van Dongen, W.3    Esmans, E.L.4    Blust, R.5    De Coen, W.M.6
  • 15
    • 77953687612 scopus 로고    scopus 로고
    • Toxicity, uptake kinetics and behavior assessment in zebrafish embryos following exposure to perfluorooctanesulphonicacid (PFOS)
    • Huang H., Huang C., Wang L., Ye X., Bai C., Simonich M.T., Tanguay R.L., Dong Q. Toxicity, uptake kinetics and behavior assessment in zebrafish embryos following exposure to perfluorooctanesulphonicacid (PFOS). Aquatic Toxicology 2010, 98:139-147.
    • (2010) Aquatic Toxicology , vol.98 , pp. 139-147
    • Huang, H.1    Huang, C.2    Wang, L.3    Ye, X.4    Bai, C.5    Simonich, M.T.6    Tanguay, R.L.7    Dong, Q.8
  • 16
    • 79960333580 scopus 로고    scopus 로고
    • Perfluorooctane sulfonate impairs the cardiac development of a marine medaka (Oryzias melastigma)
    • Huang Q., Fang C., Wu X., Fan J., Dong S. Perfluorooctane sulfonate impairs the cardiac development of a marine medaka (Oryzias melastigma). Aquatic Toxicology 2011, 105:71-77.
    • (2011) Aquatic Toxicology , vol.105 , pp. 71-77
    • Huang, Q.1    Fang, C.2    Wu, X.3    Fan, J.4    Dong, S.5
  • 18
    • 79959282614 scopus 로고    scopus 로고
    • Effects of salinity and organic matter on the partitioning of perfluoroalkyl acid (PFAs) to clay particles
    • Jeon J., Kannan K., Lim B.J., An K.G., Kim S.D. Effects of salinity and organic matter on the partitioning of perfluoroalkyl acid (PFAs) to clay particles. Journal of Environmental Monitoring 2011, 13:1803-1810.
    • (2011) Journal of Environmental Monitoring , vol.13 , pp. 1803-1810
    • Jeon, J.1    Kannan, K.2    Lim, B.J.3    An, K.G.4    Kim, S.D.5
  • 20
    • 77956185374 scopus 로고    scopus 로고
    • Effect of perfluorooctanesulfonate on osmoregulation in marine fish, Sebastes schlegeli, under different salinities
    • Jeon J., Lim H.K., Kannan K., Kim S.D. Effect of perfluorooctanesulfonate on osmoregulation in marine fish, Sebastes schlegeli, under different salinities. Chemosphere 2010, 81:228-234.
    • (2010) Chemosphere , vol.81 , pp. 228-234
    • Jeon, J.1    Lim, H.K.2    Kannan, K.3    Kim, S.D.4
  • 23
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001, 25:402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 24
    • 0037083898 scopus 로고    scopus 로고
    • Monitoring perfluorinated surfactants in biota and surface water samples following an accidental release of fire-fighting foam into Etobicoke Creek
    • Moody C.A., Martin J.W., Kwan W.C., Muir D.C., Mabury S.A. Monitoring perfluorinated surfactants in biota and surface water samples following an accidental release of fire-fighting foam into Etobicoke Creek. Environmental Science and Technology 2002, 36:545-551.
    • (2002) Environmental Science and Technology , vol.36 , pp. 545-551
    • Moody, C.A.1    Martin, J.W.2    Kwan, W.C.3    Muir, D.C.4    Mabury, S.A.5
  • 26
    • 67949106368 scopus 로고    scopus 로고
    • Endocytic proteins in the regulation of nuclear signaling, transcription and tumorigenesis
    • Pyrzynska B., Pilecka I., Miaczynska M. Endocytic proteins in the regulation of nuclear signaling, transcription and tumorigenesis. Molecular Oncology 2009, 3:321-338.
    • (2009) Molecular Oncology , vol.3 , pp. 321-338
    • Pyrzynska, B.1    Pilecka, I.2    Miaczynska, M.3
  • 27
    • 78349298325 scopus 로고    scopus 로고
    • Gene expression profiling in wild-type and PPARalpha-null mice exposed to perfluorooctane sulfonate reveals PPARalpha-independent effects. PPAR Research, doi:10.1155/2010/794739
    • Rosen, M.B., Schmid, J.R., Corton, J.C., Zehr, R.D., Das, K.P., Abbott, B.D., Lau, C., 2010. Gene expression profiling in wild-type and PPARalpha-null mice exposed to perfluorooctane sulfonate reveals PPARalpha-independent effects. PPAR Research, doi:10.1155/2010/794739.
    • (2010)
    • Rosen, M.B.1    Schmid, J.R.2    Corton, J.C.3    Zehr, R.D.4    Das, K.P.5    Abbott, B.D.6    Lau, C.7
  • 28
    • 44649122644 scopus 로고    scopus 로고
    • Developmental toxicity and alteration of gene expression in zebrafish embryos exposed to PFOS
    • Shi X., Du Y., Lam P.K., Wu R.S., Zhou B. Developmental toxicity and alteration of gene expression in zebrafish embryos exposed to PFOS. Toxicology and Applied Pharmacology 2008, 230:23-32.
    • (2008) Toxicology and Applied Pharmacology , vol.230 , pp. 23-32
    • Shi, X.1    Du, Y.2    Lam, P.K.3    Wu, R.S.4    Zhou, B.5
  • 29
    • 44649122644 scopus 로고    scopus 로고
    • Developmental toxicity and alteration of gene expression in zebrafish embryos exposed to PFOS
    • Shi X., Du Y., Lam P.K.S., Wu R.S.S., Zhou B. Developmental toxicity and alteration of gene expression in zebrafish embryos exposed to PFOS. Toxicology and Applied Pharmacology 2008, 230:23-32.
    • (2008) Toxicology and Applied Pharmacology , vol.230 , pp. 23-32
    • Shi, X.1    Du, Y.2    Lam, P.K.S.3    Wu, R.S.S.4    Zhou, B.5
  • 30
    • 67650770098 scopus 로고    scopus 로고
    • Protein profiles in zebrafish (Danio rerio) embryos exposed to perfluorooctane sulfonate
    • Shi X., Yeung L.W.Y., Lam P.K.S., Wu R.S.S., Zhou B. Protein profiles in zebrafish (Danio rerio) embryos exposed to perfluorooctane sulfonate. Toxicological Sciences 2009, 110:334-340.
    • (2009) Toxicological Sciences , vol.110 , pp. 334-340
    • Shi, X.1    Yeung, L.W.Y.2    Lam, P.K.S.3    Wu, R.S.S.4    Zhou, B.5
  • 31
    • 0036209605 scopus 로고    scopus 로고
    • Structural determinants of fluorochemical-induced mitochondrial dysfunction
    • Starkov A.A., Wallace K.B. Structural determinants of fluorochemical-induced mitochondrial dysfunction. Toxicological Sciences 2002, 66:244-252.
    • (2002) Toxicological Sciences , vol.66 , pp. 244-252
    • Starkov, A.A.1    Wallace, K.B.2
  • 34
    • 57749195712 scopus 로고    scopus 로고
    • RNA-seq: a revolutionary tool for transcriptomics
    • Wang Z., Gerstein M., Snyder M. RNA-seq: a revolutionary tool for transcriptomics. Nature Reviews Genetics 2009, 10:57-63.
    • (2009) Nature Reviews Genetics , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 35
    • 84862777820 scopus 로고    scopus 로고
    • PFOS induced precocious hatching of Oryzias melastigma - from molecular level to individual level
    • Wu X., Huang Q., Fang C., Ye T., Qiu L., Dong S. PFOS induced precocious hatching of Oryzias melastigma - from molecular level to individual level. Chemosphere 2012, 87:703-708.
    • (2012) Chemosphere , vol.87 , pp. 703-708
    • Wu, X.1    Huang, Q.2    Fang, C.3    Ye, T.4    Qiu, L.5    Dong, S.6
  • 36
    • 79951578688 scopus 로고    scopus 로고
    • PFOS prenatal exposure induce mitochondrial injury and gene expression change in hearts of weaned SD rats
    • Xia W., Wan Y.J., Li Y.Y., Zeng H.C., Lv Z.Q., Li G.Q., Wei Z.Z., Xu S.Q. PFOS prenatal exposure induce mitochondrial injury and gene expression change in hearts of weaned SD rats. Toxicology 2011, 282:23-29.
    • (2011) Toxicology , vol.282 , pp. 23-29
    • Xia, W.1    Wan, Y.J.2    Li, Y.Y.3    Zeng, H.C.4    Lv, Z.Q.5    Li, G.Q.6    Wei, Z.Z.7    Xu, S.Q.8
  • 38
    • 77949918206 scopus 로고    scopus 로고
    • Effect of salinity and sediment characteristics on the sorption and desorption of perfluorooctane sulfonate at sediment-water interface
    • You C., Jia C., Pan G. Effect of salinity and sediment characteristics on the sorption and desorption of perfluorooctane sulfonate at sediment-water interface. Environmental Pollution 2010, 158:1343-1347.
    • (2010) Environmental Pollution , vol.158 , pp. 1343-1347
    • You, C.1    Jia, C.2    Pan, G.3
  • 39


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.